Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D05
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 134 1e-32
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 123 3e-29
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 89 7e-19
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 62 7e-11
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 43 4e-05
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 42 8e-05
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 34 0.015
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 33 0.027
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 32 0.062
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 32 0.062
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 30 0.25
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 30 0.33
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 30 0.33
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.76
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 29 0.76
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 28 1.0
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 28 1.3
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 27 1.8
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 27 2.3
SPAC23H4.07c |srp102||signal recognition particle receptor beta ... 26 5.4
SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family ... 25 9.4
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 9.4
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 9.4
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 134 bits (323), Expect = 1e-32
Identities = 60/89 (67%), Positives = 71/89 (79%)
Frame = +1
Query: 220 FRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDL 399
F+ L G REMRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNV V Y+N+ F VWD+
Sbjct: 9 FQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDV 68
Query: 400 GGQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
GGQ IRP WR Y+ NT II+VV S DR
Sbjct: 69 GGQDKIRPLWRHYFQNTQGIIFVVDSNDR 97
Score = 44.4 bits (100), Expect = 1e-05
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALR 643
RI + +EL ML E L +A+L+V ANKQD+ + A + LGL +LR
Sbjct: 99 RISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLR 149
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 123 bits (296), Expect = 3e-29
Identities = 59/98 (60%), Positives = 70/98 (71%)
Frame = +1
Query: 205 GLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKF 384
G F L +EMRIL+LGLD AGKTTILYKL++ + V TIPT+GFNV VTYKN+KF
Sbjct: 8 GFSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKF 67
Query: 385 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDRASNR 498
VWD+GGQ IRP WR Y+ T +I+VV S D SNR
Sbjct: 68 NVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSAD--SNR 103
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 488 HRIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALRD 646
+RI ++ EL ++ + + + +L+VLANKQD+ G L+ A + L LD L+D
Sbjct: 102 NRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKD 154
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 88.6 bits (210), Expect = 7e-19
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +1
Query: 232 LGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDLGGQT 411
L RE+R+L+LGLD AGKTTIL L +V PT GF + + + L+F +WD+GGQ
Sbjct: 12 LKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQK 71
Query: 412 SIRPYWRCYYGNTDAIIYVVXSXD 483
++R +W+ Y+ +T+AII+VV S D
Sbjct: 72 TLRNFWKNYFESTEAIIWVVDSLD 95
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 62.1 bits (144), Expect = 7e-11
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDLGGQTSIR 420
+ ++L LGLD AGKTT+L+ L+ + PT+ ++ N++F +DLGG R
Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQAR 78
Query: 421 PYWRCYYGNTDAIIYVVXSXD 483
WR Y+ + I+Y+V D
Sbjct: 79 RLWRDYFPEVNGIVYLVDCCD 99
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 42.7 bits (96), Expect = 4e-05
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVXQVTY----KNLKFQVWDLGGQTS 414
++L++G G GK+ +L + + I TIG + T+ K +K Q+WD GQ
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 415 IRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
R YY II V D+ S N+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNV 99
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 41.9 bits (94), Expect = 8e-05
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFN----VXQVTYKNLKFQVWDLGGQT 411
+++L++G G GK+ +L + + I TIG + ++ K +K Q+WD GQ
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 412 SIRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
R YY I+ + D+ S N+
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNV 100
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 34.3 bits (75), Expect = 0.015
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEV-VTTIPTIG--FNVXQVTYKN--LKFQVWDLGGQTS 414
+ +++G G GK+ +L + E + + TIG F + N +K Q+WD GQ
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 415 IRPYWRCYYGNTDAIIYVVXSXDRASNRNI*R 510
R YY + V ++S N+ R
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGR 103
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 33.5 bits (73), Expect = 0.027
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 337 TIGFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXD 483
T+G + T +L+ +++D+GGQ + R W + N ++II+ V D
Sbjct: 179 TLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLND 227
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 32.3 bits (70), Expect = 0.062
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNV----XQVTYKNLKFQVWDLGGQTS 414
+++++G G GKTT + + GE I T+G V + + F VWD GQ
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 415 IRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
+ YY I + R + +N+
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNV 100
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 32.3 bits (70), Expect = 0.062
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKL-------QVGEVV-----TTIPTIGFNVXQVTYKNLKFQV 390
++I++ G G GK+ +L + QV V + I ++G Q K +K Q+
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQ---KRIKLQI 66
Query: 391 WDLGGQTSIRPYWRCYY-GNTDAI-IYVVXSXD 483
WD GQ R R YY G A+ +Y V + D
Sbjct: 67 WDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKD 99
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 30.3 bits (65), Expect = 0.25
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVXQ---VTYKNLKFQVWDLGGQTSI 417
+I+ILG AGKT++L G PTI N V +++ +WD GQ
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 418 RPYWRCYYGNTDAII--YVVXSXDRASN 495
Y +T I+ + V S D N
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLEN 102
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 29.9 bits (64), Expect = 0.33
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVXQVTY--KNLKFQVWDLGGQT 411
++++ILG G GKT+I+ + + TIG F +V K + Q+WD GQ
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 412 SIRPYWRCYYGNTDAIIYV 468
+ +Y D + V
Sbjct: 69 RFQSLGVAFYRGADCCVLV 87
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.9 bits (64), Expect = 0.33
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVV 324
R+ ILG +GAGK+T++ K+ +GEV+
Sbjct: 721 RVAILGPNGAGKSTLI-KVLIGEVI 744
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.7 bits (61), Expect = 0.76
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTI 342
+E+R++I G G GK++++ L + VT+IP +
Sbjct: 2 KEVRVVICGDQGVGKSSLISALIQEDNVTSIPKV 35
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 28.7 bits (61), Expect = 0.76
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKLQVGEV-VTTIPTIGFNVXQVTYK----NLKFQVWDLGGQ 408
+++ ++G GKT+++ G + T+G N + T + F +WDLGGQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVXQ----VTYKNLKFQVWDLGGQT 411
++++ILG G GKT ++ + + TIG + V K + Q+WD GQ
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68
Query: 412 SIRPYWRCYYGNTDAIIYV 468
+ +Y D + V
Sbjct: 69 RFQSLGMAFYRGADCCVIV 87
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 27.9 bits (59), Expect = 1.3
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Frame = +1
Query: 250 RILILGLDGAGKTT---ILYKLQVGEVVTTI-PTIGFNVXQVTYK-NLKFQVWDLGGQTS 414
++L++G G+GK++ I++ V + + TI V + NL +WD GGQ +
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQEA 63
Query: 415 IRPYWRC-----YYGNTDAIIYVVXSXDRASNRNI 504
+ + N +IYV R R++
Sbjct: 64 FMENYLSAQRDHIFRNVQVLIYVFDVESREFERDL 98
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +1
Query: 235 GAREMRILILGLDGAGKTTILYKLQV 312
G ++++L+LG +GKTTI+ ++++
Sbjct: 71 GGNDIKVLLLGAGDSGKTTIMKQMRL 96
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 373 NLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDRAS 492
++K ++WD GQ + YY N + I V AS
Sbjct: 63 SVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAAS 102
>SPAC23H4.07c |srp102||signal recognition particle receptor beta
subunit Srp102 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 25.8 bits (54), Expect = 5.4
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 205 GLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKF 384
G+F + R + + + ++G +GKT++ +L E TT+P+I N + +K +
Sbjct: 25 GIF-FTRKTIQKKLPAVFLIGPSDSGKTSLFCELIYKEKKTTVPSIEPN--EAVWKYGAW 81
Query: 385 QVWDLGGQTSIRPYWRCYYG---NTDAIIYVVXS 477
V DL G + + + N A+++V+ S
Sbjct: 82 LV-DLPGHPRAKRWITTKFSGNYNVKAVVFVLNS 114
>SPAC4F10.10c |||mannosyltransferase complex subunit, Anp family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 259 ILGLDGAGKTTILYKLQVGEVVTTIPTIGF 348
I+ LDG G T +L K V PT F
Sbjct: 275 IMALDGVGTTALLVKASVHRDGALFPTFPF 304
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 238 AREMRILILGLDGAGKTTI 294
++ I+++G+ GAGKTTI
Sbjct: 861 SKNASIILIGMRGAGKTTI 879
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 383 NLRFLYVTCXTLNPIVGIVVTTSPTCNL*RIVVF 282
N R++ +C + I GI+++ SP+ L +VF
Sbjct: 113 NRRYILFSCVIIGSISGIILSWSPSSFLLGKIVF 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,599,118
Number of Sequences: 5004
Number of extensions: 52265
Number of successful extensions: 136
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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