Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D05
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 140 9e-34
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 123 1e-28
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 108 3e-24
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 107 1e-23
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 89 3e-18
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 81 6e-16
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 77 2e-14
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 72 5e-13
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 59 3e-09
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 54 8e-08
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 42 3e-04
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 40 0.002
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 40 0.002
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 38 0.009
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 37 0.012
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 37 0.012
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_214| Best HMM Match : Arf (HMM E-Value=0) 36 0.038
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 35 0.066
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 34 0.087
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 33 0.15
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 33 0.26
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 33 0.26
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 0.81
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.81
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 31 1.1
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 30 1.4
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 2.5
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 29 2.5
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 29 2.5
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 29 2.5
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 29 3.3
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 29 3.3
SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 28 5.7
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 7.5
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 27 9.9
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 140 bits (339), Expect = 9e-34
Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +1
Query: 199 MGGLFS-YFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKN 375
MGG+F+ F GL G +EMRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNV V YKN
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 376 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
+ F VWD+GGQ IRP WR Y+ NT +I+VV S DR
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 97
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALRD 646
R+G +++EL ML E L +A+L+V ANKQD+ + A + LGL +LR+
Sbjct: 99 RVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRN 150
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 133 bits (322), Expect = 1e-31
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = +1
Query: 214 SYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVW 393
S F L G ++MRIL++GLD AGKTTILYKL++GE+VTTIPTIGFNV V YKN+ F VW
Sbjct: 7 SLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVW 66
Query: 394 DLGGQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
D+GGQ IRP WR Y+ NT +IYVV S DR
Sbjct: 67 DVGGQDKIRPLWRHYFQNTQGLIYVVDSNDR 97
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALRD 646
R+ SK+EL ML E L +A+++V+ANKQD+ L+V+ + + LGL ++RD
Sbjct: 99 RVNESKEELNKMLQEDELKDAVVLVMANKQDLPNALSVSEITEKLGLQSIRD 150
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 123 bits (296), Expect = 1e-28
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 193 NKMGG-LFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTY 369
+KMG + S FR LLG E+R+L++GLD AGKTTILY L++ E V TIPTIGFNV V Y
Sbjct: 72 SKMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEY 131
Query: 370 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
KN+KF VWD+GGQ IR WR Y+ T +I+VV S DR
Sbjct: 132 KNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDR 170
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALR 643
RI +K+EL +L E L A L+VLANKQD+ ++ + + L L LR
Sbjct: 172 RIQEAKEELFKLLKEEELKRAALLVLANKQDLPDSMSTTELSEKLSLHTLR 222
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 108 bits (260), Expect = 3e-24
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +1
Query: 259 ILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCY 438
++GLD AGKTTILY+L++ EVV+T+PT+GFNV VTYKN+ F VWD+GGQ IR WR Y
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVY 60
Query: 439 YGNTDAIIYVVXSXDR 486
Y II+VV S DR
Sbjct: 61 YQGCQGIIFVVDSADR 76
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 503 SKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALR 643
+++EL +L E L IL+V+ANKQDMA +T + + + L L+ +R
Sbjct: 82 ARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIREKLKLNEIR 128
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 107 bits (256), Expect = 1e-23
Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +1
Query: 187 LINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQV- 363
L++K+ LFS F G R++RI++LGLD AGKTTILYKL++ E V+TIPTIGFNV +
Sbjct: 4 LLSKVITLFSEF----GNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQ 59
Query: 364 TYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXD 483
KN+ +WD+GGQ IRP WR Y+ T+ +++VV S D
Sbjct: 60 PTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSD 99
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGL 631
R+ +K+EL +L + +VV+ANKQD+ L + + LGL
Sbjct: 102 RMPEAKEELHGVLDSDEFRDVPVVVVANKQDLPNALKAGEMAKHLGL 148
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +1
Query: 211 FSYFRGLLGA-REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVT-YKNLKF 384
F FR +L R +++LGLD +GKT+ILY+ + E V T+PT FNV + +K ++F
Sbjct: 9 FRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRF 68
Query: 385 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVXS 477
+VWD+GG+ RP W+ Y TDA+IYVV S
Sbjct: 69 KVWDIGGREQNRPLWKAYARQTDAVIYVVDS 99
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 461 YMLXTXLTGHRIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDAL 640
Y++ + G ++ ++DEL ++L L A +++ ANKQD + + L L L
Sbjct: 95 YVVDSTSAG-KLEEARDELFNLLNSAQLNGAPILIFANKQDCPNAIPPREITHMLSLHDL 153
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +1
Query: 205 GLFSYFRGLLGA--REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQVTYK-N 375
GL S R L REMRIL+LGLD +GKTTIL L +V+ PT GFN+ V K
Sbjct: 2 GLLSLLRKLKSEKDREMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGG 61
Query: 376 LKFQVWDLGGQTSIRPYWRCYYGNTDAI 459
+ VWD+GGQ IRPYW+ Y+ NTD +
Sbjct: 62 FRLNVWDIGGQRKIRPYWKNYFENTDIL 89
Score = 35.1 bits (77), Expect = 0.050
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 512 ELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALR 643
EL +L E L L+V ANKQD+ T A + LGL+ +R
Sbjct: 90 ELDELLEEEKLIGVPLLVFANKQDLMNAATPAEISSNLGLNTIR 133
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 283 KTTILYKLQVGEVVTTIPTIGFNVXQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDAI 459
KTTILYKL++ E V T+PT+ FNV ++ KN+ F VWD+GGQ IR WR Y+ + I
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 460 IYVVXSXDR 486
I+VV S D+
Sbjct: 182 IFVVDSADK 190
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGL 631
RI ++EL +L L +VV+ANKQD+ G + + + L L
Sbjct: 192 RIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSL 238
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 235 GAREMRILILGLDGAGKTTILYKLQVGEVVTTI-PTIGFNVXQVTYKNLKFQVWDLGGQT 411
G E R L DG+ ++ Q + + P GFNV V YKN+ F VWD+GGQ
Sbjct: 462 GQTEQRFFALAQDGSRRSRYKGSRQKTHIQAMVSPVQGFNVETVEYKNISFTVWDVGGQD 521
Query: 412 SIRPYWRCYYGNTDAIIYVVXSXDR 486
IRP WR Y+ NT +I+VV S DR
Sbjct: 522 KIRPLWRHYFQNTQGLIFVVDSNDR 546
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQ 580
R G +K+EL ML E L +A+L+V ANKQ
Sbjct: 548 RAGEAKEELSRMLAEDELRDAVLLVFANKQ 577
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 208 LFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVXQVTYKNLKF 384
+ +F+ L EM + ++GL +GKTT + + G+ IPT+GFN+ +V+ N+
Sbjct: 8 ILDWFKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTI 67
Query: 385 QVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXD 483
+VWD+GGQ R W Y + I+Y+V + D
Sbjct: 68 KVWDIGGQPRFRSMWERYCRGVNCIVYMVDAAD 100
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 244 EMRILILGLDGAGKTTILYKLQVGEVV---TTIPTIGFNVXQVTYKNLKFQVWDLGGQTS 414
E RIL+LGLDG+GK+ L L G+ +T T GFNV +T L +W++GG
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEK 225
Query: 415 IRPYWRCYYGNTDAIIYVVXSXD 483
R YW + +T ++YVV S D
Sbjct: 226 YRAYWPNFIADTQLLVYVVDSSD 248
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLD 634
R S+D L +L L ++++A+KQD+ G ++ + LG++
Sbjct: 251 RFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGARQLSEIVSVLGIN 298
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +2
Query: 491 RIGISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALR 643
RIGISK EL+ ML E L AIL+V ANKQDM G ++ + V ALGL AL+
Sbjct: 184 RIGISKQELLAMLEEDELKKAILIVFANKQDMEGAMSSSEVSNALGLSALK 234
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 403 GQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
GQTSIRPYWRCYY NTDA+IYVV S D+
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDK 182
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Frame = +1
Query: 184 KLINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTIL--YKLQVGEVVTTIP------T 339
++ + GL+ Y L E ILILGLD AGKTT+L K + + IP T
Sbjct: 4 EMFTLLSGLWKY---LFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTT 60
Query: 340 IGFNVXQVTYKNLKFQVWDLGGQTSIRPYW 429
+G N+ ++T ++K WDLGGQ +R W
Sbjct: 61 VGLNIGKITISHVKLMFWDLGGQQELRTLW 90
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 54.4 bits (125), Expect = 8e-08
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 301 KLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 450
K+++ V + GFNV V +++LKF +WD+GG +RP WR YY NT
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 379 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
K +WD+GGQ S+R YWR Y+ +TD +I+VV S D+
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQ 38
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVV-----TTIPTIGFNVXQVTYKNLKFQVWDLGGQTS 414
++L++G G GKT+++ + G T +G V + +K Q WD GQ
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 415 IRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
R + YY N DA+I V +R + +I
Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASI 102
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Frame = +1
Query: 238 AREMRILILGLDGAGKTTILYKLQVGEV-VTTIPTIGFNV----XQVTYKNLKFQVWDLG 402
A+ +I+I+G GKT + Y+L G+ T TIG + ++ + +K Q+WD
Sbjct: 44 AKTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTA 103
Query: 403 GQTSIRPYWRC-YYGNTDAIIYV 468
GQ R C YY N +A++++
Sbjct: 104 GQERFRKSMVCHYYRNVNAVVFM 126
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +1
Query: 244 EMRILILGLDGAGKTTILYKLQVGEVV-TTIPTIG--FNVXQVTYKN---LKFQVWDLGG 405
+ RI+++G GK+++L + G+ + PT+G F+V + K +K Q+WD G
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 406 QTSIRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
Q R YY NT + + +R S N+
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSFVNV 105
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG--FNVXQVTY--KNLKFQVWDLGGQTS 414
++L++G G GK+++L + T I TIG F + +T K +K Q+WD GQ
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 415 IRPYWRCYYGNTDAIIYV 468
R YY + I+ +
Sbjct: 70 FRTLTTAYYRSAHGIVLI 87
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVXQVTY--KNLKFQVWDLGGQTS 414
+I+++G GKT ++ + G PTIG F + V + +K Q+WD GQ
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 415 IRPYWRCYYGNTDAIIYVVXSXDRAS 492
R + YY N D +I ++ S
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKS 94
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 325 TTIPTIGFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVV 471
T + T G Q YK L F+++D+GGQ S R W + + AIIY V
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 274
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 325 TTIPTIGFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVV 471
T + T G Q YK L F+++D+GGQ S R W + + AIIY V
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 226
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 394 DLGGQTSIRPYWRCYYGNTDAIIYVVXSXDR 486
D+GGQ IRP WR Y+ + +I+VV DR
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADR 173
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 325 TTIPTIGFNVXQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVV 471
T + T G T+K+L F+++D+GGQ S R W C+ G T AII+ V
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCV 225
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 226 GLLGAREMRILILGLDGAGKTTILYKLQV 312
G ARE+++L+LG +GK+TI+ ++++
Sbjct: 27 GERAAREVKLLLLGAGESGKSTIVKQMKI 55
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 503 SKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALRD 646
+K +LV ++ L A L++LANKQD+ G ++VA + + L L ++D
Sbjct: 35 NKFQLVAIIAICELKQAALLILANKQDIKGSMSVAEISEQLNLACIKD 82
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKLQVGEVVTTI-PTIG--FNVXQVTYKN--LKFQVWDLGGQT 411
++ILI+G G GK+++L + I TIG F V +T + K +WD GQ
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 412 SIRPYWRCYYGNTDAIIYVVXSXDR 486
R YY +I V + R
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSR 93
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 370 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXD 483
KN+ F VWD+GGQ ++R ++ + + +IYVV S D
Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTD 51
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 500 ISKDELVHMLXEXXLXNAILVVLANKQDMAGCLTVAXVHQALGLDALR 643
+++ +L+ +L E + + +VV+ANKQD+ L + + LGL L+
Sbjct: 55 LNEAQLLGILQEKVMVDVPVVVVANKQDLPNVLKAGDIAEHLGLLKLK 102
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEV-VTTIPTIGFNVX----QVTYKNLKFQVWDLGGQTS 414
+I+++G G GK+++L + E + + TIG QV K +K QVWD GQ
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 415 IRPYWRCYY-GNTDAII 462
R YY G A++
Sbjct: 74 YRAITSAYYRGAVGAVL 90
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG--FNVXQV--TYKNLKFQVWDLGGQTS 414
++LI+G GKT+ L++ + + T+G F V V K +K Q+WD GQ
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 415 IRPYWRCYY 441
R YY
Sbjct: 83 YRTITTAYY 91
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +1
Query: 223 RGLLGAREMRILILGLDGAGKTTILYKLQVGEVV-TTIPTIGFNVXQVTYKN------LK 381
R G M+++++G + GKTT++++L + T G ++ + K
Sbjct: 544 RSARGYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFI 603
Query: 382 FQVWDLGGQTSIRPYWRCYYGNTDAIIYV 468
F++WD GGQ +C+ I V
Sbjct: 604 FKIWDFGGQEDYYATHQCFISTLSLYILV 632
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 370 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
K +K Q+WD GQ R YY II V D+ S N+
Sbjct: 76 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV 120
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 35.5 bits (78), Expect = 0.038
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +1
Query: 331 IPTIGFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXD 483
+PT+ +++ ++F +DLGG R W+ Y+ + I++++ D
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCAD 55
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEVVT-TIPTIGFN----VXQVTYKNLKFQVWDLGGQTS 414
++++LG G GKT++ Y+L+ TIG + ++ K + VWD G
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 415 IRPYWRCYYGNTDAIIYVVXSXDRAS 492
R + YY A I + D S
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGS 98
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +1
Query: 313 GEVVTTIPTIGFNVXQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAII--YVVXSX 480
G +TTI + F + + + +K Q+WD GQ R YY T +I Y V S
Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62
Query: 481 DRASN 495
D N
Sbjct: 63 DTFVN 67
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +1
Query: 256 LILGLDGAGKTTILYKLQVGEVVTT-IPTIGFNVXQVTYKN----LKFQVWDLGGQTSIR 420
L +G G GKTT + + GE I T+G V + + +KF VWD GQ
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 421 PYWRCYYGNTDAIIYVVXSXDRASNRNI 504
YY I + R + +N+
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSRVTYKNV 123
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Frame = +1
Query: 229 LLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIP-TIGFNVXQVTY---------KNL 378
+ ++RI ++G G GKT++++ + E +++ TIG V Y K
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF 60
Query: 379 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
+ WD+GG + +Y + +I V +R S N+
Sbjct: 61 FLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNL 102
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTI----LYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDLGGQ 408
+ +R+++LG DG GK+ + L + +GE T+ + ++ Q+ +++ + D G+
Sbjct: 15 KPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAGE 74
Query: 409 TSIR 420
+R
Sbjct: 75 VRVR 78
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 343 GFNVXQVTYKNLKFQVWDLGGQTSIRPYWRCYY-GNTDA-IIYVVXSXD 483
G + V K++K Q+WD GQ R R YY G A ++Y + S +
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRE 181
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +1
Query: 247 MRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQ 360
M+++++G+ G GKTT+L L+ + + + T+G V +
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDE 704
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +1
Query: 241 REMRILILGLDGAGKTT----ILYKLQVGEVVTTIPTIGFNV 354
R +R+++LG DG GK+ +L K +GE +T+ +GF +
Sbjct: 15 RSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYI 56
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTI----LYKLQVGEVVTTIPTIGFNVXQVTYKNLKFQVWDLGGQ 408
R ++++I+G DG GK+ + L K +GE T+ + +V + + ++ D G+
Sbjct: 860 RIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGE 919
Query: 409 TSIRPYWRCY-YGNTDAIIYVVXS 477
S RC G ++Y + S
Sbjct: 920 NSPAKLERCLEIGEVFVVLYSITS 943
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTIL------YKLQVGEVVTTIP-TIGFNVXQVTY-KNLKFQVWD 396
+++++ I+G +GAGKTT++ Y ++ V+ + T G + + ++L+ +V+D
Sbjct: 566 KQVKVTIVGGEGAGKTTLVKALGFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFD 625
Query: 397 LGGQT 411
LGG +
Sbjct: 626 LGGDS 630
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 196 KMGGLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPT 339
KM GLF L A R+LI G GAGKTT+ KL +PT
Sbjct: 358 KMDGLFVVDGQLKEA--CRVLIEGESGAGKTTLCQKLAFDWAKGELPT 403
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 196 KMGGLFSYFRGLLGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPT 339
KM GLF L A R+LI G GAGKTT+ KL +PT
Sbjct: 1760 KMDGLFVVDGQLKEA--CRVLIEGESGAGKTTLCQKLAFDWAKGELPT 1805
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 370 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVXSXDRASNRNI 504
K +K Q+WD GQ YY I+ V + S NI
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI 47
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = +1
Query: 232 LGAREMRILILGLDGAGKTTILY---KLQVGEVVTTIPTIGFNVX---QVTYKNLKFQVW 393
+ A +++I+G GKT +L K Q EV +PT+ N +V K ++ +W
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALW 5982
Query: 394 DLGGQTSIRPYWRCYYGNTDAII--YVVXSXDRASN 495
D GQ Y +TD I+ + + S D N
Sbjct: 5983 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLEN 6018
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = +1
Query: 244 EMRILILGLDGAGKTTILYKLQVGEVVT-TIPTIGFNVXQVTY----KNLKFQVWDLGGQ 408
+ ++++LG GK++++ + G+ TIG T +KF++WD GQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 409 TSIRPYWRCYYGNTDAIIYV 468
YY A I V
Sbjct: 81 ERYHSLAPMYYRGAQAAIVV 100
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 370 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAII--YVVXSXDRASN 495
+++K Q+WD GQ R + YY + + +I Y + D N
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKN 136
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 250 RILILGLDGAGKTTILYKLQVGEV------VTTIPTIGFNVXQVTYKNLKFQVWDLGGQT 411
+I + G G GKT+I +L E + I + + K LK +WD G
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 412 SIRPYWRCYYGNTDAIIYVVXSXD 483
R +Y N+ ++ VV S D
Sbjct: 70 EYESLTRNHYSNS-KVVLVVYSLD 92
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTILYKLQVGEVVTTI--PTIGFNVXQVTYK-----NLKFQVWDL 399
R ++L++G GK + + K V + + PTIG + T + ++ Q+W +
Sbjct: 17 RNFKVLVVGDILTGKQSFV-KRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLI 75
Query: 400 GGQTSIRPYWRCYYGNTDAII 462
GQ R YY DA +
Sbjct: 76 AGQERFSSMTRVYYKGADACV 96
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +1
Query: 232 LGAREMRILILGLDGAGKTTILYKLQVGEVVTT-IPTIG-FNVXQVTYK---NLKFQVWD 396
L A R+++LG G GKT+++ + G PT+G VT N ++ D
Sbjct: 103 LPAAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMD 162
Query: 397 LGGQTSIRPYWRCYYGNTDAIIYVVXSXDRAS 492
G + N DA + V ++AS
Sbjct: 163 TAGSYPFPAMKKLTIQNADAFVLVYSVDEKAS 194
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 232 LGAREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIGFNVXQV 363
+ A + +L+ G G GKTT+ K++ +PT GF ++
Sbjct: 47 MAAYKKHVLLTGPPGIGKTTLCSKVKQALASRGVPTQGFYTEEI 90
>SB_16779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 241 REMRILILGLDGAGKTTILYKLQV 312
+ +R++++G DG GKT I Y L +
Sbjct: 13 KAVRVMVMGQDGVGKTDIRYTLAI 36
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 560 VVLANKQDMAGCLTVAXVHQALGLDAL 640
V LANKQD+ G + V+Q+L L AL
Sbjct: 28 VRLANKQDLEGAMNDDEVYQSLDLGAL 54
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 244 EMRILILGLDGAGKTTILYKLQVGEV 321
E RI ++G +G+GKTT+L K+ +GE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +1
Query: 184 KLINKMGGLFSYFRGL--LGAREMRILILGLDGAGKTTILYKLQVGEVVTTI---PTIGF 348
K +N + G F + + ++ +++++LG GAGKT+ + L E + T+G
Sbjct: 238 KGMNSIRGFFESMKKSRPVHSKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGV 297
Query: 349 NVX--QVTYKNLKFQVWDLGGQ 408
+ QV L+ QV D GQ
Sbjct: 298 VIRNWQVEPDGLEVQVVDCAGQ 319
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 347 NPIVGIVVTTSPTCNL*RIVVFPAPSNPSIKIRISLAPSNPLK*LNRPP 201
+P+ + TSP N V+ P P I SL P PL+ N PP
Sbjct: 867 SPLSRAPLGTSPIINTKPAVLPGLPGTPPITSPSSLPPPPPLQGYNPPP 915
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,665,417
Number of Sequences: 59808
Number of extensions: 384282
Number of successful extensions: 911
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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