Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D03
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.41 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   8.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 170 STGLGAHACRTLISHASRSWP 108
           +TGL   ACR   S A+  WP
Sbjct: 45  ATGLSLPACRLFCSEAAALWP 65


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 233 VFSPHRGNDSA*SPSAGTGRYSTG 162
           VFSPH G   A SP    G    G
Sbjct: 404 VFSPHAGPSGAYSPDGTMGYMMDG 427


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 386 PLDYGRNDFQNDEFENRNLKNRYSIKPKILNLSNDV 493
           PLD   N+ + D      LKN  SI   IL    DV
Sbjct: 455 PLDARCNEIRPDAICVSQLKNALSIDKGILREKPDV 490


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 332 PGTCLAGGQILIVWYKIDCIRYRF 261
           PG  +A G      Y I C RYRF
Sbjct: 197 PGGSIANG------YAISCARYRF 214


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 416 FGNHFFRSLREKYSEHLSILNANCQN 339
           +G HFF+      SE+  +LN   +N
Sbjct: 39  YGRHFFKKNLIVGSENCLVLNVYTKN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,026
Number of Sequences: 336
Number of extensions: 2297
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)