Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D03
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456537-1|CAG30423.1| 674|Homo sapiens PCQAP protein. 38 0.031
BC013985-1|AAH13985.1| 748|Homo sapiens PC2 (positive cofactor ... 38 0.031
BC007529-1|AAH07529.1| 384|Homo sapiens PCQAP protein protein. 38 0.031
BC003078-1|AAH03078.1| 767|Homo sapiens PCQAP protein protein. 38 0.031
AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein. 38 0.031
AK000003-1|BAA92228.1| 235|Homo sapiens FLJ00003 protein protein. 38 0.031
AF328769-1|AAK58423.1| 746|Homo sapiens PC2-glutamine-rich-asso... 38 0.031
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 33 0.88
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 33 0.88
AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. 30 8.2
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 30 8.2
>CR456537-1|CAG30423.1| 674|Homo sapiens PCQAP protein.
Length = 674
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 634 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 670
>BC013985-1|AAH13985.1| 748|Homo sapiens PC2 (positive cofactor 2,
multiprotein complex) glutamine/Q-rich-associated pro
protein.
Length = 748
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 708 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 744
>BC007529-1|AAH07529.1| 384|Homo sapiens PCQAP protein protein.
Length = 384
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 344 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 380
>BC003078-1|AAH03078.1| 767|Homo sapiens PCQAP protein protein.
Length = 767
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 727 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 763
>AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein.
Length = 811
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 771 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 807
>AK000003-1|BAA92228.1| 235|Homo sapiens FLJ00003 protein protein.
Length = 235
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 195 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 231
>AF328769-1|AAK58423.1| 746|Homo sapiens
PC2-glutamine-rich-associated protein protein.
Length = 746
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1
Query: 43 FLHRVERAMDARCARLPKSCSVGQLLDAWEMSVRQAC 153
FL V R M +R +LP SV LL+ W SV QAC
Sbjct: 706 FLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 742
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 84 QATKKLFCGPTPGRVGDERAAGVRTQPGRVPAGPRARALSG 206
QATK P P + GD R A + +P R P PR R LSG
Sbjct: 648 QATKTTAPVPEPTKPGDPREARRKERPARTP--PRRRTLSG 686
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +3
Query: 84 QATKKLFCGPTPGRVGDERAAGVRTQPGRVPAGPRARALSG 206
QATK P P + GD R A + +P R P PR R LSG
Sbjct: 413 QATKTTAPVPEPTKPGDPREARRKERPARTP--PRRRTLSG 451
>AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein.
Length = 1269
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 99 LFCGPT-PGRVGDERAAGVRTQPGRVPAGPRARAL 200
LF G PGR RAAG +PGR P GPRA L
Sbjct: 1174 LFPGAAVPGRRPRRRAAGHPRRPGR-PCGPRAPGL 1207
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 398 GRNDFQNDEFENRNLKNRYSIKPKILNLSNDVLXVIKLSRSAF 526
G+ +++ EFE ++R +++ K++NL DV+ ++ S F
Sbjct: 805 GKRVYRDLEFEEDQREHRAAVQQKLMNLHQDVVTIMTNSYEVF 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,949,687
Number of Sequences: 237096
Number of extensions: 1321725
Number of successful extensions: 3229
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3229
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -