Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_D03
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92806-1|CAB07258.1|  802|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AL032627-21|CAD66221.1|  289|Caenorhabditis elegans Hypothetical...    28   5.0  
AF106579-6|ABS19465.1|  406|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z92806-1|CAB07258.1|  802|Caenorhabditis elegans Hypothetical
           protein K10G4.1 protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 541 MNFKHNFEYFKVIKISLERNKIXNLFILSXA 633
           +NF   FE+FK +K+ L+   + NL  +  A
Sbjct: 688 LNFNQLFEHFKTLKVCLQNFTVDNLLFMKQA 718


>Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical
           protein F52B11.4 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 117 PGRVGDERAAGVRTQPGRVPAGP 185
           PGR G   AAG+   PGR PA P
Sbjct: 119 PGRPGRPGAAGLPGNPGRPPAQP 141


>Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.6 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 117 PGRVGDERAAGVRTQPGRVPAGP 185
           PGR G   AAG+   PGR PA P
Sbjct: 119 PGRPGRPGAAGLPGNPGRPPAQP 141


>Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.5 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 117 PGRVGDERAAGVRTQPGRVPAGP 185
           PGR G   AAG+   PGR PA P
Sbjct: 119 PGRPGRPGAAGLPGNPGRPPAQP 141


>Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.1 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 117 PGRVGDERAAGVRTQPGRVPAGP 185
           PGR G   AAG+   PGR PA P
Sbjct: 119 PGRPGRPGAAGLPGNPGRPPAQP 141


>AL032627-21|CAD66221.1|  289|Caenorhabditis elegans Hypothetical
           protein Y41C4A.19 protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 117 PGRVGDERAAGVRTQPGRVPAGP 185
           PGR G   AAG+   PGR PA P
Sbjct: 103 PGRPGRPGAAGLPGNPGRPPAQP 125


>AF106579-6|ABS19465.1|  406|Caenorhabditis elegans Hypothetical
           protein F54E2.4 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 84  QATKKLFCGPTPGRVGDERAAGVRTQPGRVPAGPRA 191
           Q+T  L C P P  V   ++A     P + P GP A
Sbjct: 100 QSTCILICAPAPTPVPGAKSAVASPAPPQTPVGPSA 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,530,601
Number of Sequences: 27780
Number of extensions: 221360
Number of successful extensions: 577
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)