Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_D01
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33747-1|AAC46903.1| 376|Drosophila melanogaster extradenticle ... 171 7e-43
L19295-1|AAC37182.1| 376|Drosophila melanogaster extradenticle ... 171 7e-43
AY061065-1|AAL28613.1| 376|Drosophila melanogaster LD03509p pro... 171 7e-43
AE014298-2315|AAN09379.1| 376|Drosophila melanogaster CG8933-PC... 171 7e-43
AE014298-2314|AAF48556.1| 376|Drosophila melanogaster CG8933-PB... 171 7e-43
AE014298-2313|AAF48555.1| 376|Drosophila melanogaster CG8933-PA... 171 7e-43
Z18864-1|CAA79313.1| 365|Drosophila melanogaster Dpbx protein. 168 5e-42
AY328470-1|AAP93640.1| 332|Drosophila melanogaster nuclear migr... 30 3.2
AY071485-1|AAL49107.1| 332|Drosophila melanogaster RE55422p pro... 30 3.2
AE014296-2806|AAF49407.2| 332|Drosophila melanogaster CG9710-PA... 30 3.2
>U33747-1|AAC46903.1| 376|Drosophila melanogaster extradenticle
protein.
Length = 376
Score = 171 bits (416), Expect = 7e-43
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQEE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEE 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>L19295-1|AAC37182.1| 376|Drosophila melanogaster extradenticle
protein.
Length = 376
Score = 171 bits (416), Expect = 7e-43
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQEE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEE 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>AY061065-1|AAL28613.1| 376|Drosophila melanogaster LD03509p
protein.
Length = 376
Score = 171 bits (416), Expect = 7e-43
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQEE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEE 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>AE014298-2315|AAN09379.1| 376|Drosophila melanogaster CG8933-PC,
isoform C protein.
Length = 376
Score = 171 bits (416), Expect = 7e-43
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQEE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEE 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>AE014298-2314|AAF48556.1| 376|Drosophila melanogaster CG8933-PB,
isoform B protein.
Length = 376
Score = 171 bits (416), Expect = 7e-43
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQEE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEE 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>AE014298-2313|AAF48555.1| 376|Drosophila melanogaster CG8933-PA,
isoform A protein.
Length = 376
Score = 171 bits (416), Expect = 7e-43
Identities = 89/128 (69%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQEE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEE 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>Z18864-1|CAA79313.1| 365|Drosophila melanogaster Dpbx protein.
Length = 365
Score = 168 bits (409), Expect = 5e-42
Identities = 88/128 (68%), Positives = 95/128 (74%), Gaps = 7/128 (5%)
Frame = +3
Query: 291 RKQDIGEILQQIMNITDQSLHEAQARKHTLNCHTMKPALFSVLCEIKEKTVLSLXNTQEE 470
+++DIGEILQQIM+I++QSL EAQARKHTLNCH MKPALFSVLCEIKEKTVLS+ NTQE
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEG 98
Query: 471 EPPDPXLMRLDNMLIAEGVXGPXKXXXXXXXXXXXXXXXEW-------DNAIEHSDYRAK 629
EPPDP LMRLDNMLIAEGV GP K DNAIEHSDYRAK
Sbjct: 99 EPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAK 158
Query: 630 LAXIXQIY 653
LA I QIY
Sbjct: 159 LAQIRQIY 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 182 MDDPNRMMAHXGGMMGPQG 238
M+DPNRM+AH GGMM PQG
Sbjct: 1 MEDPNRMLAHTGGMMAPQG 19
>AY328470-1|AAP93640.1| 332|Drosophila melanogaster nuclear
migration protein NudC protein.
Length = 332
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 129 ITYTYFVRDFQFQVGKPKFKVNVKNETPLVE 37
+T+ RD +GK KV +K +TP+++
Sbjct: 190 LTFGLRARDLVISIGKKSLKVGIKGQTPIID 220
>AY071485-1|AAL49107.1| 332|Drosophila melanogaster RE55422p
protein.
Length = 332
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 129 ITYTYFVRDFQFQVGKPKFKVNVKNETPLVE 37
+T+ RD +GK KV +K +TP+++
Sbjct: 190 LTFGLRARDLVISIGKKSLKVGIKGQTPIID 220
>AE014296-2806|AAF49407.2| 332|Drosophila melanogaster CG9710-PA
protein.
Length = 332
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 129 ITYTYFVRDFQFQVGKPKFKVNVKNETPLVE 37
+T+ RD +GK KV +K +TP+++
Sbjct: 190 LTFGLRARDLVISIGKKSLKVGIKGQTPIID 220
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,156,553
Number of Sequences: 53049
Number of extensions: 396220
Number of successful extensions: 1020
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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