Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C24
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1015 + 33819203-33821827                                         31   0.60 
11_04_0001 + 11984639-11984875,11984989-11985278,11985361-119857...    28   7.4  

>01_06_1015 + 33819203-33821827
          Length = 874

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 219 LWYVQCEAILAPXKLSDEARYNLVVTKLGKDV 314
           +W    + ++ P  L+ E  YNL+ TK+GKDV
Sbjct: 56  MWPHGPDTVIMPQPLTYEESYNLLCTKIGKDV 87


>11_04_0001 +
           11984639-11984875,11984989-11985278,11985361-11985719,
           11985797-11985984,11986058-11986247,11986497-11986631,
           11986694-11986947
          Length = 550

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +3

Query: 348 PDEKKFDTLKERLLKIYEXSXMRQFQKLLXEMELGDQKPSQLLRR 482
           PD   F  +KER+ KI+  + +  +  LL E  L    P    RR
Sbjct: 50  PDSLDFMVMKERMYKIFSNAIVVCYSHLLPEFALMKSDPPITQRR 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,759
Number of Sequences: 37544
Number of extensions: 264757
Number of successful extensions: 669
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)