Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C24
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15530.2 68417.m02373 pyruvate phosphate dikinase family prot...    27   8.2  
At4g15530.1 68417.m02372 pyruvate phosphate dikinase family prot...    27   8.2  
At3g19170.1 68416.m02434 peptidase M16 family protein / insulina...    27   8.2  

>At4g15530.2 68417.m02373 pyruvate phosphate dikinase family protein
           contains Pfam profiles: PF01326 pyruvate phosphate
           dikinase, PEP/pyruvate binding domain, PF02896
           PEP-utilizing enzyme, TIM barrel domain
          Length = 960

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 195 EFWCDQPRLWYVQCEAILAPXKLSDEARYNLVVTKLGKDVVQQVSDILLKPP 350
           EF   + RLW +QC A     K + +    + V  +G+ +V++ S I +  P
Sbjct: 394 EFTVQEERLWMLQCRA----GKRTGKGAVKIAVDMVGEGLVEKSSAIKMVEP 441


>At4g15530.1 68417.m02372 pyruvate phosphate dikinase family protein
           contains Pfam profiles: PF01326 pyruvate phosphate
           dikinase, PEP/pyruvate binding domain, PF02896
           PEP-utilizing enzyme, TIM barrel domain
          Length = 898

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 195 EFWCDQPRLWYVQCEAILAPXKLSDEARYNLVVTKLGKDVVQQVSDILLKPP 350
           EF   + RLW +QC A     K + +    + V  +G+ +V++ S I +  P
Sbjct: 332 EFTVQEERLWMLQCRA----GKRTGKGAVKIAVDMVGEGLVEKSSAIKMVEP 379


>At3g19170.1 68416.m02434 peptidase M16 family protein / insulinase
           family protein contains Pfam domain, PF05193: Peptidase
           M16 inactive domain
          Length = 1080

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 640 CVVSMTLSAIADRCSKSFA-SQTASTPRTAADR*PCHIILRVSSGILSRARSLIRR 476
           C+ S + S++  R  + F  S  + T  TAA R P   + R+SS  ++  R L+RR
Sbjct: 7   CLASRSSSSLFFRFFRQFPRSYMSLTSSTAALRVPSRNLRRISSPSVAGRRLLLRR 62


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,847,196
Number of Sequences: 28952
Number of extensions: 211552
Number of successful extensions: 432
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)