Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C18
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2A520 Cluster: Novel protein similar to dynein, axonem...    36   0.85 
UniRef50_UPI0000DA3660 Cluster: PREDICTED: similar to dynein, ax...    35   1.5  
UniRef50_A6C317 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_A2A520 Cluster: Novel protein similar to dynein, axonemal,
            heavy polypeptide 9; n=2; Mus musculus|Rep: Novel protein
            similar to dynein, axonemal, heavy polypeptide 9 - Mus
            musculus (Mouse)
          Length = 3582

 Score = 35.9 bits (79), Expect = 0.85
 Identities = 18/97 (18%), Positives = 46/97 (47%)
 Frame = +3

Query: 270  KPEIKLLLLVSCIYLHNTMNSLNNVFSSRMXXXXXXXXXXXXXXXXXYEQMYAEKRXAML 449
            +PE+K  + +   Y+H T+N ++ ++ +                   Y+ + A+KR   L
Sbjct: 1990 EPEVKTSISLFMAYVHTTVNEMSKIYLTIERRYNYTTPKTFLEQIKLYQNLLAKKRME-L 2048

Query: 450  VREVXRLDNQIASMRTELXSLXXLQKETHLRRVKQKK 560
            V ++ RL+N +  +++    +  L+ +  ++  + K+
Sbjct: 2049 VAKIERLENGLMKLQSTASQVDDLKAKLAVQETELKQ 2085


>UniRef50_UPI0000DA3660 Cluster: PREDICTED: similar to dynein,
            axonemal, heavy polypeptide 9 isoform 2; n=1; Rattus
            norvegicus|Rep: PREDICTED: similar to dynein, axonemal,
            heavy polypeptide 9 isoform 2 - Rattus norvegicus
          Length = 3668

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 18/97 (18%), Positives = 45/97 (46%)
 Frame = +3

Query: 270  KPEIKLLLLVSCIYLHNTMNSLNNVFSSRMXXXXXXXXXXXXXXXXXYEQMYAEKRXAML 449
            +PE+K  + +   Y+H T+N ++  + +                   Y+ + A+KR   L
Sbjct: 2162 QPEVKTSISLFMSYVHTTVNEMSKTYLATERRYNYTTPKTFLEQIKLYQNLLAKKRME-L 2220

Query: 450  VREVXRLDNQIASMRTELXSLXXLQKETHLRRVKQKK 560
            V ++ RL+N +  +++    +  L+ +  ++  + K+
Sbjct: 2221 VAKIERLENGLMKLQSTASQVDDLKAKLAVQEAELKQ 2257


>UniRef50_A6C317 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 96

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 633 VPVHQQHLHLVQTSLEPFQVEVCQIFFVSLAEGVFLSAVXLSXRVPSSLMRSGYLILXLP 454
           + V Q HL++    L   Q  + Q F   +A  +FL+A   + R P S + SG LI    
Sbjct: 20  IAVAQFHLYVSVVELSLSQDHIRQAFGKGIAACIFLTAGGTALRYPLSGLLSGMLICFFF 79

Query: 453 ALAWLFVF 430
           AL ++ ++
Sbjct: 80  ALGYIVLW 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,945,905
Number of Sequences: 1657284
Number of extensions: 8386111
Number of successful extensions: 23307
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23301
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)