Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C15
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.31 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.31 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   2.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 288 KRLIYIYVITYXSVAVFKNYSRIFVICLNSEWIF 187
           KRL+   +  Y ++A+   +S I VI    EW F
Sbjct: 131 KRLLCYLLARYVALALVILFSEILVIVSEQEWSF 164


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 288 KRLIYIYVITYXSVAVFKNYSRIFVICLNSEWIF 187
           KRL+   +  Y ++A+   +S I VI    EW F
Sbjct: 149 KRLLCYLLARYVALALVILFSEILVIVSEQEWSF 182


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 45  YPPQSSLAASVHIC 4
           YPP   L+ S H+C
Sbjct: 73  YPPNHPLSGSKHLC 86


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 279 IYIYVITYXSVAVFKNYS 226
           +++Y+ TY SV  +  Y+
Sbjct: 135 LFLYIFTYLSVTCYVTYA 152


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 366 YLSTVRDRRVKFTI 325
           YL  +RDRRV  T+
Sbjct: 20  YLENIRDRRVLPTV 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,259
Number of Sequences: 336
Number of extensions: 1795
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)