Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C15
         (525 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071530-1|AAL49152.1|  241|Drosophila melanogaster RE57443p pro...    28   6.7  
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ...    28   6.7  
AJ428207-1|CAD21017.1|  241|Drosophila melanogaster ninjurin A g...    28   6.7  
AJ428206-1|CAD21016.1|  229|Drosophila melanogaster ninjurin A b...    28   6.7  
AJ428205-1|CAD21015.1|  245|Drosophila melanogaster ninjurin A a...    28   6.7  
AE014296-1849|AAS65043.1|  245|Drosophila melanogaster CG6449-PB...    28   6.7  
AE014296-1848|AAS65042.1|  229|Drosophila melanogaster CG6449-PC...    28   6.7  
AE014296-1847|AAF50137.2|  241|Drosophila melanogaster CG6449-PA...    28   6.7  

>AY071530-1|AAL49152.1|  241|Drosophila melanogaster RE57443p
           protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 203 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 233


>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
           protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 432 DLLSKCTIVGIPTLCTLYVLMVYLSTVR 349
           DL++   I  +PT  TLY++++Y S +R
Sbjct: 502 DLITNQLIKALPTKATLYLILIYNSILR 529


>AJ428207-1|CAD21017.1|  241|Drosophila melanogaster ninjurin A
           gamma protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 203 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 233


>AJ428206-1|CAD21016.1|  229|Drosophila melanogaster ninjurin A beta
           protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 191 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 221


>AJ428205-1|CAD21015.1|  245|Drosophila melanogaster ninjurin A
           alpha protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 207 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 237


>AE014296-1849|AAS65043.1|  245|Drosophila melanogaster CG6449-PB,
           isoform B protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 207 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 237


>AE014296-1848|AAS65042.1|  229|Drosophila melanogaster CG6449-PC,
           isoform C protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 191 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 221


>AE014296-1847|AAF50137.2|  241|Drosophila melanogaster CG6449-PA,
           isoform A protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 281 NRLVLFKVSIVYLIVIVNLTLRSRTVDR*TI 373
           NR+  + VS ++++ +VN+ + + TVDR T+
Sbjct: 203 NRINNYTVSGIFIVTVVNVLISAFTVDRDTV 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,041,137
Number of Sequences: 53049
Number of extensions: 275589
Number of successful extensions: 407
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)