Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C15
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   1.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   4.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.7  

>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 361 IDGSRSKG*IHDHNQVNNGNFK*Y*AINLYIRY 263
           I  S S   IH++N  NN N+  Y  +   I Y
Sbjct: 81  IISSLSNKTIHNNNNYNNNNYNNYKKLYYNINY 113


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 45  YPPQSSLAASVHIC 4
           YPP   L+ S H+C
Sbjct: 97  YPPNHPLSGSKHLC 110


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 45  YPPQSSLAASVHIC 4
           YPP   L+ S H+C
Sbjct: 97  YPPNHPLSGSKHLC 110


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 361 IDGSRSKG*IHDHNQVNNGNFK*Y 290
           I  S S   IH++N  NN N+  Y
Sbjct: 81  IISSLSNKTIHNNNNYNNNNYNNY 104


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 467 IXTASPIDXIPKTYYQN-VQ*SVYRRS 390
           +  ASPID +   +Y+N +   +Y RS
Sbjct: 13  LLAASPIDCVDANWYKNALVYQIYPRS 39


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 287  LVLFKVSIVYLIVIVNLTLRSR 352
            L++  V++V  +VIV L  RSR
Sbjct: 1617 LIVATVALVVAVVIVALRWRSR 1638


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 287  LVLFKVSIVYLIVIVNLTLRSR 352
            L++  V++V  +VIV L  RSR
Sbjct: 1613 LIVATVALVVAVVIVALRWRSR 1634


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,365
Number of Sequences: 438
Number of extensions: 2004
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)