Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C11
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 62 4e-10
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 60 1e-09
03_06_0479 + 34217170-34217172,34217337-34217786 60 1e-09
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 56 2e-08
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 55 5e-08
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 55 5e-08
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 51 7e-07
05_01_0103 + 686770-687017,687120-687270 51 7e-07
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 47 1e-05
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 35 0.063
02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773... 31 1.0
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 5.4
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 28 7.2
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 28 7.2
01_03_0075 - 12218501-12218611,12219028-12219267,12219698-122198... 28 7.2
05_07_0055 - 27374028-27374080,27374205-27374295,27374930-273754... 27 9.5
03_05_0257 + 22439915-22440275,22440280-22440627,22440962-224410... 27 9.5
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 9.5
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 245
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 246 TGECRYGLFDFEYT--HQCQ 299
+CRY ++DF++ CQ
Sbjct: 69 -SDCRYAIYDFDFVTEENCQ 87
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F ++W P + + MLY++S + ++ L
Sbjct: 82 TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 245
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 246 TGECRYGLFDFEY 284
G+CR+ ++DF++
Sbjct: 82 -GDCRFAIYDFDF 93
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T+E K ++F + W PD A V MLY+SS + KK L
Sbjct: 95 TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKEL 133
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 410 KSPLXGVQKYIQATDLSEASQEAVEEKLR 496
K L G+Q +QATD E S +A++++++
Sbjct: 130 KKELNGIQLEVQATDAGEISLDALKDRVK 158
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 72 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 248
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 249 GECRYGLFDFEYT 287
CRY ++D ++T
Sbjct: 65 --CRYAVYDHDFT 75
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 283 TRTSARXTSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T T+A + + K+F +SW P A V M+Y+SS + KK L
Sbjct: 80 TATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKEL 125
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 42 FLRE*HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 218
F+R H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+
Sbjct: 3 FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61
Query: 219 FLEDLQKGGTGECRYGLFDFEY 284
FL L + +CRY L+DF++
Sbjct: 62 FLASLPEN---DCRYALYDFDF 80
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F ++W P T+ + MLYS+S D +K+ L
Sbjct: 82 TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQEL 120
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 245
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 246 TGECRYGLFDFEYT--HQCQ 299
ECRY +FDF++ CQ
Sbjct: 326 ASECRYAVFDFDFVTDENCQ 345
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F +SW PDT+ V MLY+SS D K+ L
Sbjct: 340 TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKREL 378
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 245
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 246 TGECRYGLFDFEYT--HQCQ 299
ECRY +FDF++ CQ
Sbjct: 81 ADECRYAVFDFDFVTDENCQ 100
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F +SW PDT+ V MLY+SS D K+ L
Sbjct: 95 TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKREL 133
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +3
Query: 75 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 251
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 252 ECRYGLFDFEYT--HQCQ 299
ECRY ++D ++ CQ
Sbjct: 70 ECRYAVYDLDFVTDENCQ 87
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F SW PDTA MLY+SS D ++ L
Sbjct: 82 TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRREL 120
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 78 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 254
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 255 CRYGLFDFEYT--HQCQ 299
CRY +FD+++ CQ
Sbjct: 58 CRYAIFDYDFVTEENCQ 74
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F ++W PDT+ V M+Y+SS D K+ L
Sbjct: 69 TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKREL 107
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 78 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGE 254
+ V + K+ + E+K+ K HRYV+F I D + +I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 255 CRYGLFDFEY 284
CRY ++D ++
Sbjct: 77 CRYAVYDLDF 86
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 34.7 bits (76), Expect = 0.063
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 78 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 233
+ V + K+ + E+ + K HRYV+F I D + +I VE G Y+ F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>02_03_0407 -
18675368-18675378,18676047-18676977,18677323-18677376,
18677809-18678039,18678112-18678319,18678405-18678433,
18678638-18678706,18678832-18678893,18679056-18679133,
18679243-18679315,18681135-18681260
Length = 623
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +1
Query: 388 SSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHS 567
SSS D LKK L R S P P+ + SGG+ HR Y A +P +RH+
Sbjct: 420 SSSTDDLKK-LKRESWSGPI--PIKAGSGGKPFSQADHRPSPTMAYPGAMPAAKPHVRHA 476
Query: 568 CPDDTRPR 591
P+
Sbjct: 477 SSSSVSPK 484
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 105 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 251
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 210 YEQFLEDLQKGGTGECRYGLFDFEYTHQCQGHVGG 314
YE F EDL+ G E +GLF T HV G
Sbjct: 344 YELFNEDLRPGPVSEANWGLFHGNGTPVYLLHVSG 378
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 424 RSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 522
R E P R G+ +GGRRR+A +R + I
Sbjct: 11 RGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>01_03_0075 -
12218501-12218611,12219028-12219267,12219698-12219815,
12219949-12220016,12220124-12220375,12221362-12221463,
12221734-12221802,12221892-12221987,12222161-12222208,
12222352-12222479,12222818-12222896,12223651-12223797,
12223956-12224022,12224655-12224830,12225588-12225755,
12225879-12225992,12226657-12226722,12227306-12227524,
12228142-12228321,12228481-12228584,12228998-12229277,
12230582-12231004
Length = 1084
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = +1
Query: 352 PDTAXVXXXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGR----RR--EAPRHRSPI 513
P A + ++ + S SS PS RPLG GGR RR APR R
Sbjct: 6 PAAATCATALRFAHPSSSSSSSSSSSSSSLPSPRPLGGACGGRPQHGRRSLRAPRRRGGG 65
Query: 514 NSIYTRA 534
+ + RA
Sbjct: 66 DRVAARA 72
>05_07_0055 -
27374028-27374080,27374205-27374295,27374930-27375448,
27375544-27375779,27376363-27376846,27376993-27378282
Length = 890
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 114 LRKWSCKRPKLSHQTP 67
L +W C RPK H TP
Sbjct: 54 LEEWQCARPKTRHPTP 69
>03_05_0257 +
22439915-22440275,22440280-22440627,22440962-22441015,
22441390-22441763
Length = 378
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 503 RWRGASLRRPPETLPRGRSLGCTSELRXR 417
RWRG RR ++ RGR GC + R R
Sbjct: 319 RWRGLRDRRQWQSHTRGRLCGCCAVSRLR 347
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 552 GFGFVASSCVNAVYWRSVARSFSS 481
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,352,498
Number of Sequences: 37544
Number of extensions: 299087
Number of successful extensions: 1100
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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