Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C11
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 69 3e-12
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 69 3e-12
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 41 7e-04
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 41 7e-04
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 41 7e-04
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.53
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 31 0.53
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 30 1.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 30 1.6
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 29 2.1
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 29 2.8
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.6
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 27 8.6
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 239
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 240 -GGTGECRYGLFDFEYTHQCQGHVG 311
ECRY D E T Q QG G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 265 ACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSS 432
A + + + S K+ + +CPD A V MLY+SS ALK SL S
Sbjct: 70 AAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLES 125
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 239
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 240 -GGTGECRYGLFDFEYTHQCQGHVG 311
ECRY D E T Q QG G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 265 ACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSS 432
A + + + S K+ + +CPD A V MLY+SS ALK SL S
Sbjct: 70 AAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLES 125
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 287
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 289 TSARXTSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T +R + SK K+ + CPD A + M+Y+SS A+K SL
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 287
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 289 TSARXTSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T +R + SK K+ + CPD A + M+Y+SS A+K SL
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECRYGLFDFEYT 287
A +++F+ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 289 TSARXTSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T +R + SK K+ + CPD A + M+Y+SS A+K SL
Sbjct: 90 TCSRVGAGTSKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +1
Query: 307 SEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSS 432
SE S K+ L++ CPD A V MLY+SS ALK SL S
Sbjct: 147 SEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASLGLES 185
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 334 FLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPI 513
FL S+C D A + + SSS + S+ S + LG +S G R + SP+
Sbjct: 1000 FLSSFCDDPAFLIPFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPV 1059
Query: 514 NSI 522
NS+
Sbjct: 1060 NSV 1062
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 334 FLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPI 513
FL S+C D A + + SSS + S+ S + LG +S G R + SP+
Sbjct: 1000 FLSSFCDDPAFLIPFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPV 1059
Query: 514 NSI 522
NS+
Sbjct: 1060 NSV 1062
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.6
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 205 PNTNSSSRICRRAVPGNADMACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAXVXXXML 384
P+T SSS+ RRAV AD L T+A T+ A K +K CP +
Sbjct: 103 PST-SSSKSQRRAVARFADDGALPA---TAAYHTTSAPKLRKG--PQSCPGGYRDESDVS 156
Query: 385 YSSSFDALKKSLXRSSEV-HPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETE 549
Y S + K + R +V H S R ++ GR+ + RH S S + R + +E
Sbjct: 157 YESDKYSQKSNSHRRRDVLHQSMRQNYTIDEGRKPSSRRHHSS-KSDFRRRGESSE 211
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.6
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 205 PNTNSSSRICRRAVPGNADMACLTLNTRTSARXTSEASKKQKLFLMSWCPDTAXVXXXML 384
P+T SSS+ RRAV AD L T+A T+ A K +K CP +
Sbjct: 38 PST-SSSKSQRRAVARFADDGALPA---TAAYHTTSAPKLRKG--PQSCPGGYRDESDVS 91
Query: 385 YSSSFDALKKSLXRSSEV-HPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETE 549
Y S + K + R +V H S R ++ GR+ + RH S S + R + +E
Sbjct: 92 YESDKYSQKSNSHRRRDVLHQSMRQNYTIDEGRKPSSRRHHSS-KSDFRRRGESSE 146
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 280 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 179
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 280 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 179
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 577 RQGRSVGERVRFRRELVCKCC 515
R+GR G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 457 LGSVSGGRRREAPRHRSPINSIYTRARDETEPA 555
L ++S R+ P R P+ ++Y R +D PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 457 LGSVSGGRRREAPRHRSPINSIYTRARDETEPA 555
L ++S R+ P R P+ ++Y R +D PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,571,401
Number of Sequences: 27780
Number of extensions: 237982
Number of successful extensions: 828
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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