Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C11
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 62 3e-10
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 61 7e-10
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 60 9e-10
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 59 2e-09
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 59 2e-09
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 58 6e-09
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 57 9e-09
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 57 9e-09
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 56 2e-08
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 54 6e-08
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 53 2e-07
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 53 2e-07
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 51 6e-07
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 47 1e-05
At3g03290.1 68416.m00326 universal stress protein (USP) family p... 31 0.49
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 29 3.4
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 29 3.4
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 28 6.0
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 28 6.0
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 28 6.0
At5g28810.1 68418.m03542 hypothetical protein 27 7.9
At1g64430.1 68414.m07302 expressed protein 27 7.9
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 245
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP--- 61
Query: 246 TGECRYGLFDFEY--THQCQ 299
ECRY ++DF++ CQ
Sbjct: 62 ADECRYAIYDFDFVTAENCQ 81
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T+E +K K+F ++WCPD A V M+Y+SS D K+ L
Sbjct: 76 TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKREL 114
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 60.9 bits (141), Expect = 7e-10
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 72 SGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQKGGT 248
SG+ V+D KTT+ E+++ K HRYVVF I +K++ VE G Y+ FL L
Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLP---D 69
Query: 249 GECRYGLFDFEY--THQCQ 299
+CRY ++DF++ + CQ
Sbjct: 70 NDCRYAVYDFDFVTSENCQ 88
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
TSE +K K+F +W P T+ + +LYS+S D L + L
Sbjct: 83 TSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSREL 121
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 245
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VG+ YE+F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61
Query: 246 TGECRYGLFDFEY--THQCQ 299
ECRY ++DF++ CQ
Sbjct: 62 ADECRYAIYDFDFVTAENCQ 81
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T+E +K K+F ++WCPD A V M+Y+SS D K+ L
Sbjct: 76 TAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKREL 114
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 245
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 246 TGECRYGLFDFEY 284
ECRY +FDF++
Sbjct: 62 ADECRYAIFDFDF 74
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 245
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 246 TGECRYGLFDFEY 284
ECRY +FDF++
Sbjct: 62 ADECRYAIFDFDF 74
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
+SE + ++F ++W PDTA V M+Y+SS D K+ L
Sbjct: 76 SSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKREL 114
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 57.6 bits (133), Expect = 6e-09
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 248
ASG+ V D CK + E+K + +R+++F I D +Q+ VE +G Y+ F L
Sbjct: 5 ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDFTNYLP---P 60
Query: 249 GECRYGLFDFEYT 287
ECRY ++DF++T
Sbjct: 61 NECRYAVYDFDFT 73
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T+E +K K+F ++W PD++ V M+Y+SS D K+ L
Sbjct: 74 TAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKREL 112
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 57.2 bits (132), Expect = 9e-09
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 242
ASG+ V+D CK + E+K + +R++VF I DEK Q+ +E +G Y+ F +
Sbjct: 5 ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSIP-- 61
Query: 243 GTGECRYGLFDFEYTHQ--CQ 299
ECRY ++DF++T + CQ
Sbjct: 62 -DDECRYAVYDFDFTTEDNCQ 81
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T + +K K+F ++W PDT+ V MLY+SS D K+ +
Sbjct: 76 TEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREM 114
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 57.2 bits (132), Expect = 9e-09
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 242
ASG+ VSD CK + E+K + +R++VF I DEK Q+ ++ +G YE F + +
Sbjct: 5 ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSIPE- 62
Query: 243 GTGECRYGLFDFEYT--HQCQ 299
ECRY ++D+++T CQ
Sbjct: 63 --DECRYAVYDYDFTTPENCQ 81
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F ++W PDT+ V MLY+SS D K+ L
Sbjct: 76 TPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREL 114
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 78 VTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGE 254
+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L E
Sbjct: 1 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADE 57
Query: 255 CRYGLFDFEY--THQCQ 299
CRY ++DF++ CQ
Sbjct: 58 CRYAIYDFDFVTAENCQ 74
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T+E +K K+F ++WCPD A V M+Y+SS D K+ L
Sbjct: 69 TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKREL 107
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 54.4 bits (125), Expect = 6e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 69 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 248
ASG+ V D CK + E+K + R +V+ I D KQ+ VE +GE Y+ F L
Sbjct: 5 ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASLP---A 60
Query: 249 GECRYGLFDFEY--THQCQ 299
+CRY ++DF++ CQ
Sbjct: 61 DDCRYCIYDFDFVTAENCQ 79
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T+E +K K+F ++W PDTA V M+Y+SS D K+ L
Sbjct: 74 TAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKREL 112
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 78 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 257
+ V D CK + E+K + +R+++F I D +Q+ VE +G + Y+ F L EC
Sbjct: 1 MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASLP---ANEC 56
Query: 258 RYGLFDFEY 284
RY +FDF++
Sbjct: 57 RYAVFDFDF 65
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T E +K K+F ++W PD++ V M+Y+SS D K+ L
Sbjct: 67 TDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKREL 105
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +3
Query: 63 KMAS-GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQ 236
KMA+ G+ V+D C +++ ++K K HRY+VF I ++ +++ V+ VG Y + L
Sbjct: 6 KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLP 65
Query: 237 KGGTGECRYGLFDFEY 284
+CRY +FDF++
Sbjct: 66 ---VDDCRYAVFDFDF 78
Score = 33.9 bits (74), Expect = 0.092
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T + +K K+F ++W P+ + + +LY++S D L++ L
Sbjct: 80 TVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVL 118
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 84 VSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECR 260
++D CK ++ E+K K HRYVV+ + ++ +++ V+ VG Y+ L + +CR
Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPE---DDCR 57
Query: 261 YGLFDFEY 284
Y +FDF+Y
Sbjct: 58 YAVFDFDY 65
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +1
Query: 304 TSEASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
T + + K+F ++W P+ + + M+Y++S L++ L
Sbjct: 67 TVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVL 105
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +3
Query: 78 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVE------TVGERNAEYEQFLEDLQK 239
+ + D CK T+ E+K+ + R +V+ I D Q+ VE GER YE+F L
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLP- 59
Query: 240 GGTGECRYGLFDFEY 284
ECRY + D E+
Sbjct: 60 --ADECRYAILDIEF 72
Score = 34.3 bits (75), Expect = 0.069
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 322 KQKLFLMSWCPDTAXVXXXMLYSSSFDALKKSLXR-SSEVHPSDRPLGSVSGGRRR 486
++K+ ++W P TA + M+YSS+ D K+ L E H +D S+ RRR
Sbjct: 76 ERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRR 131
>At3g03290.1 68416.m00326 universal stress protein (USP) family
protein contains Pfam profile: PF00582 universal stress
protein family
Length = 274
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 183 ETVGERNAEYEQFLEDLQKGGTGE 254
ET G+ +EYE+F E+ ++GG GE
Sbjct: 45 ETDGDSTSEYEEFEEEKERGGEGE 68
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 454 PLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDDTRP 588
PL + SG + SP N TRA D T PA+ D+ +P
Sbjct: 307 PLATSSGPSGPNSVPGNSPSNIFLTRAGDRTSPAVDGMDVDEAQP 351
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 340 MSWCPDTAXVXXXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSP 510
MS C Y + L++S +S +H S S+SG RRR PR +SP
Sbjct: 94 MSTCSSNVSSQVLDRYIDGEEHLERSKQKSGSLHSS-----SLSGSRRRLPPRAQSP 145
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 385 YSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYTRARDETEPAL 558
YSS++D +S + HPS P+ S + GR+ + R S I Y R+ DE AL
Sbjct: 29 YSSAWD---QSSYYQTPNHPSASPVSSYNSGRQTPKNLERKYSRIADNY-RSIDEVTAAL 84
Query: 559 RHS 567
H+
Sbjct: 85 SHA 87
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 385 YSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYTRARDETEPAL 558
YSS++D +S + HPS P+ S + GR+ + R S I Y R+ DE AL
Sbjct: 49 YSSAWD---QSSYYQTPNHPSASPVSSYNSGRQTPKNLERKYSRIADNY-RSIDEVTAAL 104
Query: 559 RHS 567
H+
Sbjct: 105 SHA 107
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 385 YSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYTRARDETEPAL 558
YSS++D +S + HPS P+ S + GR+ + R S I Y R+ DE AL
Sbjct: 29 YSSAWD---QSSYYQTPNHPSASPVSSYNSGRQTPKNLERKYSRIADNY-RSIDEVTAAL 84
Query: 559 RHS 567
H+
Sbjct: 85 SHA 87
>At5g28810.1 68418.m03542 hypothetical protein
Length = 560
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 567 GVSES-GFGFVASSCVNAVYWRSVARSFSSTA 475
G+ E+ GFG +CV + WRS + F+ TA
Sbjct: 185 GIGEACGFGKTTLTCVPLLDWRSSRKRFNFTA 216
>At1g64430.1 68414.m07302 expressed protein
Length = 559
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 580 CRQGRSVGERVRFRRELVCKCCLLAIGGAE 491
CR G S E V F + + C CL+AI A+
Sbjct: 180 CRVGISPAEEVPFGKIVRCPSCLIAIAVAQ 209
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,914,284
Number of Sequences: 28952
Number of extensions: 225968
Number of successful extensions: 860
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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