Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C08
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...   233   9e-64
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...   123   1e-30
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   1.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   1.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   1.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score =  233 bits (570), Expect = 9e-64
 Identities = 111/137 (81%), Positives = 117/137 (85%)
 Frame = +3

Query: 237 SPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLI 416
           +P +TM S  G  G +  G L       SP SALQRAR DKTYRRSYTHAKPPYSYISLI
Sbjct: 93  TPMATMNS-YGSVGTLGRGDLGGGD--TSPNSALQRARADKTYRRSYTHAKPPYSYISLI 149

Query: 417 TMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG 596
           TMAIQN+P +MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG
Sbjct: 150 TMAIQNSPQKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG 209

Query: 597 KGSFWTLHPDSGNMFEN 647
           KGSFW+LHPDSGNMFEN
Sbjct: 210 KGSFWSLHPDSGNMFEN 226


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score =  123 bits (296), Expect = 1e-30
 Identities = 53/96 (55%), Positives = 71/96 (73%)
 Frame = +3

Query: 354 DKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 533
           +K      +  KPPYSY +LI MAI+N+P + LTL+ IY++IM  FP+YR+N+Q WQNSI
Sbjct: 72  EKESEEKKSKEKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYYRENKQGWQNSI 131

Query: 534 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMF 641
           RH+LS N CFVKVPR  D PGKG++W L P + ++F
Sbjct: 132 RHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVF 167


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 213 MGSPSVGYSPPSTMASCMGGAG 278
           +GSPS G +PP      MG  G
Sbjct: 271 LGSPSSGPAPPGDFTENMGTLG 292


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +3

Query: 306 EQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPS 443
           + E     S L+R +    Y  S     PP + ++L     + NPS
Sbjct: 111 QHERGPRNSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPS 156


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +3

Query: 306 EQEAASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPS 443
           + E     S L+R +    Y  S     PP + ++L     + NPS
Sbjct: 111 QHERGPRNSTLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPS 156



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 491 PFLQTKPAALAELDPTFAVLQRLLCESAA 577
           P  Q  P  L  + P   +    +CESAA
Sbjct: 176 PLPQVPPLPLPPIFPPTMINPSAICESAA 204


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 576 RTPDKPGKGSFWTLHPD 626
           RTPD+ G+G  W  + D
Sbjct: 367 RTPDENGEGGAWVGYED 383


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 576 RTPDKPGKGSFWTLHPDS 629
           R PD+   G FW  + D+
Sbjct: 375 RLPDENNNGGFWVGYEDT 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,310
Number of Sequences: 336
Number of extensions: 2742
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)