Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C08
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 98 1e-21
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 88 1e-18
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 88 1e-18
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 85 1e-17
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 34 0.015
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 29 0.58
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 29 0.76
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 28 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 26 4.1
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 25 9.4
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 97.9 bits (233), Expect = 1e-21
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KPPYSY LI M+I +P R LTLS IY +I + F FY ++ WQNSIRH+LS N F+
Sbjct: 128 KPPYSYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLNKAFM 187
Query: 567 KVPRTPDKPGKGSFWTLHPDSGNMF 641
K+ R + PGKG FW++ P F
Sbjct: 188 KIERPRNLPGKGHFWSIRPGHEEQF 212
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 87.8 bits (208), Expect = 1e-18
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KPPYSY +I AI ++ M+TLS IY +I +P+YR + WQNSIRH+LS N F
Sbjct: 223 KPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQNSIRHNLSLNKAFR 282
Query: 567 KVPRTPDKPGKGSFWTLHPD 626
KVPR + GKG W++ P+
Sbjct: 283 KVPRKSGEQGKGMKWSIVPE 302
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 87.8 bits (208), Expect = 1e-18
Identities = 37/86 (43%), Positives = 55/86 (63%)
Frame = +3
Query: 387 KPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 566
KP SY +LI + NP++ +TL +I ++I + + +YR W NSIRH+LS N F+
Sbjct: 291 KPNLSYANLIARTLIANPNKKMTLGDICEWIANNWSYYRHQPPAWHNSIRHNLSLNKAFI 350
Query: 567 KVPRTPDKPGKGSFWTLHPDSGNMFE 644
++PR ++PGKGSFW L P + FE
Sbjct: 351 RIPRRQNEPGKGSFWMLDPSYIDQFE 376
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 84.6 bits (200), Expect = 1e-17
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +3
Query: 378 THAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFND 557
T KPP SY +LI +AI + ++ LTLS IY +I + F +Y + WQNSIRH+LS N
Sbjct: 78 TGEKPPCSYATLIGLAILQSHNKQLTLSGIYTWIRNTFRYYLNHDGGWQNSIRHNLSLNK 137
Query: 558 CFVKVPRTPDKPGKGSFWTLHPD 626
F+KV + K KG +WT+ PD
Sbjct: 138 AFIKVEKPKGKTLKGHYWTIDPD 160
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 34.3 bits (75), Expect = 0.015
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 318 ASPTSALQRARNDKTYRRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPF 497
++PT + +R + + T+ KPP S S+ T+ IQ N S+ +T + QF +
Sbjct: 19 STPTPSARRTIGPRAPKSKTTYHKPPSSIESVSTL-IQPNKSQSVTSPYVKQFTFSSKEY 77
Query: 498 YRQNQQRWQNS 530
N+ QNS
Sbjct: 78 NSHNKHALQNS 88
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 29.1 bits (62), Expect = 0.58
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +3
Query: 159 AQPYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGA-VPYGSLPREQEAASPTSA 335
A P YS VAG S +PS GY T + A A P + P P +A
Sbjct: 318 ATDIPPPYSTPSVAGASDYSTPSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAA 377
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 28.7 bits (61), Expect = 0.76
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +3
Query: 276 GAVPYGSLPREQEAASPTSALQRARNDK---TYRRSYTHAKPPYSYISLITMAIQNNPSR 446
GAVP +LP++Q++ Q+ + Y + PYS L NPSR
Sbjct: 387 GAVPSSTLPQQQKSLDKPKPAQQPSTGQFSGNQMNQYGFSNSPYSQNMLYNFNGNANPSR 446
Query: 447 MLTLSEIYQFIMDLFPFYRQNQQR 518
+ + Y + L +QN++R
Sbjct: 447 LNPALKNYMEELKLLE--QQNKKR 468
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 165 PYPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQR 344
P P+L N V G M +P++ PST S G ++P + + P SA +
Sbjct: 219 PNPSLPLNPSVLQGQVMNNPTIPKGTPST--SIEGAKTSIPPSHAMQNPHNSFPASADRL 276
Query: 345 ARNDKTYRRSYTHAKP 392
+N ++ P
Sbjct: 277 QKNHPVQSSNFNPYTP 292
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 2.3
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -3
Query: 286 GTAPAPPMQEAMVLGGE*PTLGEPIHEPPATMLLEYRFG*GCAGMQPIPLT*GGARPGDS 107
G P PP EA + P++G P PP+T AG+ P+P+ A P +
Sbjct: 1187 GVPPVPPPSEAPPVPK--PSVGVPPVPPPSTAPPVPT---PSAGLPPVPVPTAKAPPVPA 1241
Query: 106 EDSDADVGTSPYES 65
S+A ++P S
Sbjct: 1242 PSSEAPSVSTPRSS 1255
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 446 HADALRNLPVHHGSVPFLQ-TKPAALAE 526
+ +A+RN+P G+VP+ Q PA +A+
Sbjct: 372 YMEAMRNMPAAAGAVPYPQPVMPAGMAD 399
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 9.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 168 YPNLYSNNMVAGGSCMGSPSVGYSPPSTMASCMGGAGA----VPYGSLPREQ 311
YP + S+N GG C G +G PP +A+ +G A V G P EQ
Sbjct: 244 YPFVTSSNTTVGGVCTG---LGV-PPQRIANSIGVVKAYTTRVGAGPFPTEQ 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,255,252
Number of Sequences: 5004
Number of extensions: 40610
Number of successful extensions: 131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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