Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C08
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    35   0.003
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     28   0.29 
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    25   2.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   4.8  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +3

Query: 321 SPTSALQRARNDKTYRR--SYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFP 494
           S  + LQ A +  + ++  S  +A    SY  LIT AI +     LTLS+IY++++   P
Sbjct: 92  SSNTQLQAAASSSSSKKNSSRRNAWGNLSYADLITQAISSASDSRLTLSQIYEWMVQNVP 151

Query: 495 FYR 503
           +++
Sbjct: 152 YFK 154


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
 Frame = +3

Query: 135 VNGMGCMPAQPYPNLYSN--NMVAGGSCMGSPSVGYSPPSTMASCMGGAGAVPYG--SLP 302
           V      P+Q      SN     + G  + SP+    PPS  +   G   + P G   +P
Sbjct: 73  VQAQSAAPSQTQNTSSSNASQQQSSGGAVVSPATQIVPPSAASESPGSVSSQPSGPIHIP 132

Query: 303 REQEAASPTSALQRA---RNDKTYRRSYTHAKPPYS 401
            ++ A    + L+ +    ND     +Y    PPY+
Sbjct: 133 AKRPAFDTDTRLRHSYPWGNDSAADYAYHAQYPPYA 168


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 528 SIRHSLSFNDCFVK 569
           S+R+SL F +CFVK
Sbjct: 39  SVRNSLCFGECFVK 52


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +3

Query: 213 MGSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYTHAK 389
           +G  S+G     + AS   G G+    ++     ++SP S         T  RSY+  K
Sbjct: 617 VGVRSIGPGVVESTASIAVGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIK 675


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +3

Query: 213 MGSPSVGYSPPSTMASCMGGAGAVPYGSLPREQEAASPTSALQRARNDKTYRRSYTHAK 389
           +G  S+G     + AS   G G+    ++     ++SP S         T  RSY+  K
Sbjct: 617 VGVRSIGPGVVESTASIAVGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIK 675


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 159 AQPYPNLYSNNMVAGGSC--MGSPSVGYSPPSTMA 257
           A  YPN   N   +  +    GS + GY PPST A
Sbjct: 18  ASCYPNNSQNTNSSPNTAGSQGSQNDGYFPPSTYA 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,472
Number of Sequences: 2352
Number of extensions: 11953
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)