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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C07
         (620 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22H12.04c |rps102|rps1-2, rps3a-2|40S ribosomal protein S3a|...   144   7e-36
SPAC13G6.02c |rps101|rps1-1, rps3a-1|40S ribosomal protein S3a|S...   144   9e-36
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy...    28   0.95 
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ...    28   1.3  
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz...    27   1.7  
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb...    27   2.9  
SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|c...    26   3.8  
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe...    26   5.1  
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo...    25   6.7  
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch...    25   8.8  

>SPAC22H12.04c |rps102|rps1-2, rps3a-2|40S ribosomal protein
           S3a|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 252

 Score =  144 bits (350), Expect = 7e-36
 Identities = 70/141 (49%), Positives = 101/141 (71%)
 Frame = +3

Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
           K A++ LKGR+ EVSLADLQ D   E +FRK +L  E +QG++ L +F+G+ +T+DKLR 
Sbjct: 55  KNANDSLKGRILEVSLADLQKDE--EHAFRKVKLRVEDIQGKSCLTSFNGLSITSDKLRS 112

Query: 375 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAITKKMCEII 554
           +V+KWQT IEA+  + TTDGY+ RVF IGFT + +   +KT YAQ +Q+RAI +KM ++I
Sbjct: 113 LVRKWQTTIEADQTIKTTDGYLCRVFVIGFTRRRANQVKKTTYAQSSQIRAIRQKMFQVI 172

Query: 555 TRDVTNSELREVVNXLIPDSI 617
               ++  +RE+V  LIP+ I
Sbjct: 173 QNQTSSCSMRELVQKLIPEVI 193



 Score = 38.3 bits (85), Expect = 9e-04
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = +1

Query: 88  IVDPFTRKDWYDVKAPLYVQ 147
           +VDPF+RK+WYD+KAP + +
Sbjct: 20  VVDPFSRKEWYDIKAPAFFE 39



 Score = 25.4 bits (53), Expect = 6.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 137 SMFSKRQVGTTLVNRTQXNENCFGRIEGK 223
           + F  + VG TLVNRT   +N    ++G+
Sbjct: 36  AFFEVKNVGKTLVNRTAGLKNANDSLKGR 64


>SPAC13G6.02c |rps101|rps1-1, rps3a-1|40S ribosomal protein
           S3a|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 252

 Score =  144 bits (349), Expect = 9e-36
 Identities = 70/141 (49%), Positives = 99/141 (70%)
 Frame = +3

Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
           K A++ LKGR+ EVSLADLQ D   E SFRK +L  E +QG++ L +F+G D+T+DKLR 
Sbjct: 55  KNANDSLKGRILEVSLADLQKDE--EHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRS 112

Query: 375 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAITKKMCEII 554
           +V+KWQ+ IEAN  + TTDGY+ R+F IGFT++     +KT YAQ +Q+RAI +KM ++I
Sbjct: 113 LVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVI 172

Query: 555 TRDVTNSELREVVNXLIPDSI 617
                   ++E+V  LIP+ I
Sbjct: 173 QNQANGCSMKELVQKLIPEVI 193



 Score = 39.9 bits (89), Expect = 3e-04
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +1

Query: 88  IVDPFTRKDWYDVKAPLYVQ 147
           +VDPF+RKDWYD+KAP + +
Sbjct: 20  VVDPFSRKDWYDIKAPAFFE 39



 Score = 25.4 bits (53), Expect = 6.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 137 SMFSKRQVGTTLVNRTQXNENCFGRIEGK 223
           + F  + VG TLVNRT   +N    ++G+
Sbjct: 36  AFFEVKNVGKTLVNRTAGLKNANDSLKGR 64


>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1019

 Score = 28.3 bits (60), Expect = 0.95
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
 Frame = +3

Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
           TK+A    KG   +V++  L+   DAE + + F  I EY++  N        D T  K  
Sbjct: 91  TKLAET--KGAAADVNI--LKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGK-- 144

Query: 372 WMVKKWQTLIE-ANIDVXTTDGYVLRVFCIGFTNKDSLSQRK 494
             + +W ++ E    +    D  +    C+   ++  L+  K
Sbjct: 145 -FINEWDSIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIK 185


>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 308

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 225 VFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV--KKWQTL 398
           VF+V   + + D    R+  +   +A   Q R V C  H MDL  + LR +V  ++   L
Sbjct: 86  VFDVESREFERDLVTFRNCLE-ATVANSPQAR-VFCLIHKMDLVQEDLRDLVFEERKAIL 143

Query: 399 IEANIDVXTT 428
           +E + D+ TT
Sbjct: 144 LETSKDLETT 153


>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1273

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 228 KLFPSILPKQFSLXWVRLTSVVPTCLLLNIERSLDI 121
           K+   +  K+ ++ W +L   V  C  +N+E S+ I
Sbjct: 649 KVLDMVEVKKLNILWEKLLEYVSVCFFINVEESVRI 684


>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 522

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 392 LPFFNHPPELIGCEVHAVEVAEHITS 315
           L    H PEL+ C     +VA+H+TS
Sbjct: 181 LQSMGHSPELVQCITCLPDVADHLTS 206


>SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 438

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -2

Query: 286 LRKDLSASVSACRSARETSKTLPFNPSEAIFVALGTVDKRGADLPL 149
           + KD S + +A  SA E    +P      +FV  GTV    +DLP+
Sbjct: 332 VNKD-SENQNAGESADEKMSVVPLKKYSHVFVYDGTVHANQSDLPI 376


>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 882

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +3

Query: 369 RWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYA 506
           ++    W  L+       T  GYV+R    GFT+  ++ + K  +A
Sbjct: 795 KFATSNWDKLLSRLPVAGTMRGYVVRFVTSGFTHASAIDKIKEFFA 840


>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1309

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +2

Query: 452  LHWFHQ*GLLEPTQDVLRPAHSGQ--SNHKENV 544
            LHW+    L+  +Q +  P H+GQ  S  + NV
Sbjct: 1162 LHWYSLMSLMGTSQGICIPRHAGQVLSTPRRNV 1194


>SPCC417.08 |tef3||translation elongation factor
           eEF3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1047

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 371 PELIGCEVHAVEVAEHITSL 312
           PELI C  H  EV E I SL
Sbjct: 216 PELINCIAHPEEVPETIHSL 235


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,467,522
Number of Sequences: 5004
Number of extensions: 49879
Number of successful extensions: 134
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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