Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C05
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding...    51   8e-07
AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding...    51   8e-07
Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding...    49   3e-06
Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical pr...    47   1e-05
AF003141-5|AAK21486.1|  136|Caenorhabditis elegans Lipid binding...    46   3e-05

>AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform b protein.
          Length = 137

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 335 IAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVXHK 514
           + GK+    +E+ D+Y   VGV +  R + + + P +E +++GD  T+ ++S  +    K
Sbjct: 7   LVGKWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLK 66

Query: 515 FKLGEXYEXKMPNS-IIKSVTTITND 589
           +KLG   + K  +   + SV +I ND
Sbjct: 67  WKLGTASDEKTADGRDVSSVFSIEND 92


>AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform a protein.
          Length = 152

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 335 IAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVXHK 514
           + GK+    +E+ D+Y   VGV +  R + + + P +E +++GD  T+ ++S  +    K
Sbjct: 22  LVGKWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLK 81

Query: 515 FKLGEXYEXKMPNS-IIKSVTTITND 589
           +KLG   + K  +   + SV +I ND
Sbjct: 82  WKLGTASDEKTADGRDVSSVFSIEND 107


>Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.2 protein.
          Length = 137

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +2

Query: 326 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 505
           M    G+++  + E+ D+Y   +GV  + RK  +   P++EI +DG+T      S  +  
Sbjct: 4   MNDFIGRWKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNT 63

Query: 506 XHKFKLGEXYEXKMPN 553
              FKLGE +    P+
Sbjct: 64  KLSFKLGEEFVENSPD 79


>AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding
           protein protein 6 protein.
          Length = 135

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
 Frame = +2

Query: 341 GKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVXHKFK 520
           G+++   +E+ ++Y   VGV  + RK  +   P +EI ++GD       S  +     FK
Sbjct: 7   GRWKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFK 66

Query: 521 LGEXYEXKMPNS-IIKSVTTITNDSEMXTKSVIPDT 625
           LG+ ++   P+   +KSV    N   +  +  I D+
Sbjct: 67  LGQEFDETTPDGRTVKSVVNFENGKFIHIQKKIKDS 102


>Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.6 protein.
          Length = 137

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 22/76 (28%), Positives = 39/76 (51%)
 Frame = +2

Query: 326 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 505
           M    G+++   +E+ ++Y   +GV  + RK  S++SP +EI +DGDT      S  +  
Sbjct: 4   MKEFIGRWKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNN 63

Query: 506 XHKFKLGEXYEXKMPN 553
              FK+ E +    P+
Sbjct: 64  KLAFKIREKFVEIAPD 79


>AF003141-5|AAK21486.1|  136|Caenorhabditis elegans Lipid binding
           protein protein 5 protein.
          Length = 136

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
 Frame = +2

Query: 341 GKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVXHKFK 520
           G+++  ++E+ +DY   VGV  + RK    + P +EI ++G+   +   S  +    +F 
Sbjct: 8   GRWKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFT 67

Query: 521 LGEXYEXKMPNS-IIKSVTTITNDSEMXTKSVIPDT 625
           LG  ++   P+    KS  TI +   +  +  I D+
Sbjct: 68  LGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDS 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,347,432
Number of Sequences: 27780
Number of extensions: 232756
Number of successful extensions: 407
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)