Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C04
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 199 1e-51
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 8e-45
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 159 2e-39
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 36 0.021
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 1.1
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 30 1.9
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 30 1.9
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 29 2.5
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 27 9.9
SB_49684| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_21279| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_11412| Best HMM Match : APG6 (HMM E-Value=2.52234e-44) 27 9.9
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 27 9.9
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_24837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 199 bits (486), Expect = 1e-51
Identities = 106/191 (55%), Positives = 130/191 (68%), Gaps = 3/191 (1%)
Frame = +3
Query: 84 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 263
RE+ ++ AK+AEQAERYD+MV AM V N+ EERNLLSVAYKNV+GARR+SW
Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVVGARRSSW 67
Query: 264 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ---TGES 434
R+ISS+EQ K E+ + + YR + EL C+++L +L+ YL+ Q E+
Sbjct: 68 RVISSMEQ----KAPEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEA 123
Query: 435 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 614
KVFY KM+GDYHRYL E A G+ RKE E S AYK AS A EL P+HPIRLGLALNF
Sbjct: 124 KVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNF 182
Query: 615 SVFYYEILNSP 647
SVFYYEI N P
Sbjct: 183 SVFYYEIENKP 193
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 177 bits (430), Expect = 8e-45
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 2/168 (1%)
Frame = +3
Query: 141 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 320
M +AMK +S+ L EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K
Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERKK 55
Query: 321 NMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGN 500
YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKGDY+RY E A +
Sbjct: 56 QNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGAD 115
Query: 501 DRKEAAENSLVAYKAASDIAMTE--LPPTHPIRLGLALNFSVFYYEIL 638
R+E + ++ AY A +IA + LPPT PIRLGLALNFSVFYYEI+
Sbjct: 116 RRREVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIV 163
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Frame = +3
Query: 501 DRKEAAENSLVAYKAASDIAMT---ELPPTHPIRLGLALNFSVFYYEI 635
D E +L AYK A + A T +L PT PIRLGLALNFSVF+YEI
Sbjct: 204 DNLTVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEI 251
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 159 bits (386), Expect = 2e-39
Identities = 81/128 (63%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Frame = +3
Query: 75 LSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 254
++++E++VY AKLAEQAERYD+MV +MK VA EL+ E+RNLLSVAYKNVIGARR
Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGT---ELSTEDRNLLSVAYKNVIGARR 57
Query: 255 ASWRIISSIEQKEETKGAE-DKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGE 431
ASWRII+SIEQKEE+KG + KL MIR YR +E+EL+ IC +IL +LD LI +SQ+ E
Sbjct: 58 ASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEE 117
Query: 432 SKVFYYKM 455
SKVFY K+
Sbjct: 118 SKVFYNKI 125
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 155 bits (376), Expect = 3e-38
Identities = 72/142 (50%), Positives = 107/142 (75%)
Frame = +3
Query: 84 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 263
RE +Y AKL+EQ +RYDEM + MK V+ + +L+ EERNLLSV+YKN++G RR+SW
Sbjct: 84 RETLIYNAKLSEQCDRYDEMAKIMKEVSEKYP---KLSKEERNLLSVSYKNIVGQRRSSW 140
Query: 264 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVF 443
R+ISSIE+K L +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ E+KVF
Sbjct: 141 RVISSIEEK---TAESSSLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVF 196
Query: 444 YYKMKGDYHRYLAEFATGNDRK 509
Y+K+KGDY+RYLAEF+ G + K
Sbjct: 197 YFKLKGDYYRYLAEFSHGQEHK 218
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 72.1 bits (169), Expect = 4e-13
Identities = 39/101 (38%), Positives = 60/101 (59%)
Frame = +3
Query: 84 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 263
R + V AKLAEQ ER+++++ MK N S N+ E RNLLSV YKNV+G++R +W
Sbjct: 190 RNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVGYKNVVGSKRFAW 246
Query: 264 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDIL 386
R + + + +L I Y+ ++E EL+ +C +IL
Sbjct: 247 RHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 36.3 bits (80), Expect = 0.021
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Frame = +3
Query: 87 EDNVYKAKLAEQAERYDEMV----EAMKNVASRNVSDNELTVEE----RNLLSVAYKNVI 242
+ N+ K KL + E Y + + +A +N N N+L +E R+L S+ + N +
Sbjct: 1955 DPNLQK-KLKDLEESYQKALKDNEDAERNYLDLNRKYNKLVMEHGNISRDLESLKHDNDL 2013
Query: 243 GARRA-SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDK 401
R ++ Q++E + A++K+N + AY++ E++LR+ D++ K
Sbjct: 2014 KNERIIDLESSLAVYQEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 32.7 bits (71), Expect = 0.26
Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 99 YKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 278
+ KLAE +Y + +E M N A + + + + + +E+ L + K + A++ S + ++
Sbjct: 1460 FNDKLAETQSQYSQDMEEM-NQAKKEL-EIKYSTKEKELRAELEKREVQAKQTSETMTAN 1517
Query: 279 IEQ--KEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYK 452
I Q + E K ++ L + ++ + + S I +++++ SQ
Sbjct: 1518 ISQLNEREKKHKQEMLVLENNWKEKYSEIEERYSSQISNIIEQHQREISQ---------- 1567
Query: 453 MKGDYHRYLAEFATGNDRK 509
+K D+H LAE N +K
Sbjct: 1568 LKSDHHSELAELKAHNQQK 1586
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +3
Query: 99 YKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 278
YK K E + ++ +A ++ S N SDNE+ + RN +S + + R +S +
Sbjct: 1024 YKIKFIEWRKLQSQLQKARRSSPSVN-SDNEVCHDARNTISKLREEMEELRESSAAAQKA 1082
Query: 279 IEQKEETKGAEDKLN--MIRAYRSQVEKELRD 368
+EQ+++ + + ++N I R +++K + +
Sbjct: 1083 LEQEKQQRLEKLEMNNQEIMFLREELQKAVEE 1114
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +3
Query: 72 QLSEREDNVYKAKLAEQAERYDEM---VEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 242
++ + D V +AK A+ YD + ++ + + + D E +++LL+ +K ++
Sbjct: 349 EMDQWMDAVQQAK-AQFTREYDPAKSEIPDIETIFQKKIEDLESANNDKDLLN--HKKIV 405
Query: 243 GARRASWRIISSIEQKEETKGAED 314
G + W++ EQ GAED
Sbjct: 406 GFDKKIWKVHHEKEQMIGAGGAED 429
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Frame = +3
Query: 72 QLSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNL--LSVAYKNVIG 245
+L E+ N ++ L + ++Y+E++EA++ S+ VEER L L+ A +G
Sbjct: 1648 ELFEKMKNDHEQDLTSERKKYEEIIEALQGELSK-AEVRLKEVEERLLSALAEAKSQKLG 1706
Query: 246 ARRASWRIISSIEQKEETKGAEDKLNM-IRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 422
S I + K KG E + + + A + + E+ L+ + ++ + +K I
Sbjct: 1707 NDPESPTSIDESDIKLIKKGLEFEYDQKLSAEKRKFEETLQGLRKEVGNLQEKRKII--- 1763
Query: 423 TGESKVFYYKMKGDYHRYLAEFATGNDRKE 512
+ +V+ + G R++ E + N + E
Sbjct: 1764 --QERVYNQESFGAVDRHVIEKSIANYKME 1791
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 81 ERED-NVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRA 257
ER D +V L Q R + + MK R+ ++ + +E++ L A ++ R
Sbjct: 438 ERVDLDVQVTNLRSQKIRLEAEISVMKEERRRDDNEVDHLRKEKSDLEKAMHSL---RSE 494
Query: 258 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 380
++ + I E+T + + +R +EKELRD+ S+
Sbjct: 495 KTKVETDITMAEDTWRKRNDTSELRFEADDLEKELRDLRSE 535
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 219 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHYLPFP 79
TA S PP +A C T C + P P P T L H LP P
Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 66 HPQLSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 230
H +SERE KA++ A E A ++A + ++NE +E R+L +A+
Sbjct: 786 HRTISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 450 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHP 587
++K Y ++L +F KE AENS A A+ A PP P
Sbjct: 859 EVKEAYRKWLDDFMKSAREKEIAENSRYASTQAATSAPYASPPPSP 904
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 90 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 218
D VY+ L RY+E+V + N + +N TV +R ++
Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122
>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 90 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER 209
D VY+ L RY EMV + N + +N TV ++
Sbjct: 170 DEVYRPYLTTDETRYTEMVFVVDNTVYQRYQNNTKTVTDK 209
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 412 GMRYLSRTPRMSEQMSRSSFSTWLRYALIMFNLSSAPFVSSFCSMEE 272
G R RTP ++ + S +W YALI+F+L F+ C++ E
Sbjct: 77 GSRLKGRTPHLTRALM--SILSWSEYALILFSL----FIGVACNILE 117
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 66 HPQLSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEE 206
HP LS + A++ ++AE +E + + SDNE EE
Sbjct: 461 HPDLSTPKKTALVAEIKKEAEEEEEKEPKSEKKKRKRTSDNESEKEE 507
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 458 GRLPPVPGRVRDRQRPQGGCRELAGR 535
GR PP R DR+RP G R GR
Sbjct: 725 GRSPPPSHRFDDRRRPDEGFRGAPGR 750
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 255 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLI--PSSQTG 428
+S IS I +K+ +++ + Y Q E + S ++ LDKYLI S+TG
Sbjct: 980 SSLETISKIREKQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTG 1039
Query: 429 ESK 437
+ K
Sbjct: 1040 KKK 1042
>SB_49684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 269 HLLHRTE-GRNKRRRRQIEHDQSVP 340
HL+H++ GRNK RRQ + D P
Sbjct: 29 HLIHQSATGRNKEHRRQFDSDSWEP 53
>SB_21279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 83 FRQLWMTNDFTLTKSDRQVTYSR 15
F+QLW +LT++ +++TY R
Sbjct: 167 FKQLWPQRFLSLTRASQEITYER 189
>SB_17982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 381 ILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFAT 494
++GV D + ++GE +FYY +K HR+ F T
Sbjct: 1 MVGVDDDWFAYQCKSGEV-LFYYNVKSGEHRWAIHFCT 37
>SB_11412| Best HMM Match : APG6 (HMM E-Value=2.52234e-44)
Length = 587
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +3
Query: 276 SIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKM 455
S E ++ K E+ +N + +VE+E D+ L K S Q E++ YY
Sbjct: 177 SKELEDLQKEEEELINRL----DEVEQERHDVSE----ALKKEKEISKQLEEAEKAYYTE 228
Query: 456 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 554
+Y R L +F D K++ +N ++ +A D
Sbjct: 229 YCEYQRELLDF---EDEKQSVDNQMMYAQAQLD 258
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 255 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLI--PSSQTG 428
+S IS I +K+ +++ + Y Q E + S ++ LDKYLI S+TG
Sbjct: 1331 SSLETISKIREKQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTG 1390
Query: 429 ESK 437
+ K
Sbjct: 1391 KKK 1393
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +3
Query: 72 QLSEREDNVYKAKLAEQAERY-----DEMVEAMKNVASRNVSDNELTVEERNLLSVAYKN 236
+L ERE V +A + EQ ++Y + + +R + +N +T+ N +
Sbjct: 21 ELKERELQVLQANI-EQLKKYIGENLPTIQQERLESENRELHENVITLIRENKTLKSNAE 79
Query: 237 VIGARRASWRIISSIEQKEETKGAEDKLNMIRAY 338
++ R +S I +I++KE KG + R+Y
Sbjct: 80 LVDIRLSSLNEILTIQEKELCKGVMEAQVTDRSY 113
>SB_24837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 269 HLLHRTE-GRNKRRRRQIEHDQSVP 340
HL+H++ GRNK RRQ + D P
Sbjct: 29 HLIHQSATGRNKEHRRQFDSDSWEP 53
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +3
Query: 102 KAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSI 281
K + A E ++AMK++ ++ + +ER + A++N I R S++
Sbjct: 248 KTESMAMASSSQEQIKAMKDLLAKARDEITSLKDEREKMITAHQNRIEQLRESFK----- 302
Query: 282 EQKEETKGAEDKLN-MIRAYRSQVEKELRDICSDILGVLDKYL 407
++ EE DKLN I + + +KE ++ ++ K L
Sbjct: 303 KKMEEADAWPDKLNKAILEEQEKFKKEKDELWKELNDSFQKEL 345
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,051,770
Number of Sequences: 59808
Number of extensions: 327576
Number of successful extensions: 1118
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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