Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C03
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 144 1e-33
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 140 3e-32
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 136 6e-31
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 128 2e-28
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 126 3e-28
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 113 3e-24
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 98 2e-19
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 94 3e-18
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 93 5e-18
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 92 1e-17
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 92 1e-17
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 91 2e-17
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 87 3e-16
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 84 2e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 82 1e-14
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 81 2e-14
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 81 2e-14
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 80 4e-14
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 79 7e-14
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 79 1e-13
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 79 1e-13
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 78 2e-13
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 78 2e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 78 2e-13
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 78 2e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 77 3e-13
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 77 3e-13
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 77 5e-13
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 76 8e-13
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 76 8e-13
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 75 1e-12
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 75 1e-12
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 74 3e-12
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 74 3e-12
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 73 5e-12
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 73 5e-12
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 73 5e-12
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 73 6e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 73 6e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 6e-12
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 73 8e-12
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 73 8e-12
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 73 8e-12
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 72 1e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 72 1e-11
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 72 1e-11
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 72 1e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 72 1e-11
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 72 1e-11
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 72 1e-11
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 71 2e-11
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 71 2e-11
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 71 2e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 71 2e-11
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 71 2e-11
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 71 3e-11
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 71 3e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 71 3e-11
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 70 4e-11
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 70 4e-11
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 4e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 70 4e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 70 4e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 70 6e-11
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 69 7e-11
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 69 7e-11
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 7e-11
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 69 1e-10
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 69 1e-10
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 1e-10
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 69 1e-10
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 68 2e-10
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 68 2e-10
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 68 2e-10
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 68 2e-10
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 68 2e-10
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 67 3e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 3e-10
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 67 3e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 67 3e-10
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 67 3e-10
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 67 3e-10
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 54 3e-10
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 67 4e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 4e-10
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 67 4e-10
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 67 4e-10
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 67 4e-10
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 66 5e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 66 5e-10
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 66 5e-10
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 66 5e-10
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 66 5e-10
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 66 7e-10
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 66 7e-10
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 66 7e-10
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 66 7e-10
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 66 9e-10
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 66 9e-10
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 66 9e-10
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 66 9e-10
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 65 1e-09
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 65 1e-09
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 65 1e-09
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 65 1e-09
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 65 1e-09
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 65 2e-09
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 65 2e-09
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 65 2e-09
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 65 2e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 64 2e-09
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 64 2e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 2e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 64 2e-09
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 64 2e-09
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 64 2e-09
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 64 2e-09
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 64 3e-09
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 64 3e-09
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 64 3e-09
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 64 4e-09
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 64 4e-09
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 64 4e-09
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 64 4e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 63 5e-09
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 63 5e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 63 5e-09
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 63 5e-09
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 63 5e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 63 6e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 63 6e-09
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 63 6e-09
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 63 6e-09
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 63 6e-09
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 63 6e-09
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 63 6e-09
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 63 6e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 62 8e-09
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 62 1e-08
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 62 1e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 62 1e-08
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 62 1e-08
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 62 1e-08
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 62 1e-08
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 62 1e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 62 1e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 62 1e-08
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 62 1e-08
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 61 2e-08
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 2e-08
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 61 2e-08
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 61 2e-08
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 61 2e-08
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 61 2e-08
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 3e-08
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 61 3e-08
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 61 3e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 61 3e-08
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 61 3e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 3e-08
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 60 3e-08
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 60 3e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 60 3e-08
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 60 3e-08
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 60 3e-08
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 60 5e-08
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 60 5e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 60 5e-08
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 60 5e-08
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R... 60 5e-08
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 60 5e-08
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 60 5e-08
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 60 6e-08
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 60 6e-08
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 60 6e-08
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 59 8e-08
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 59 8e-08
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 59 8e-08
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 8e-08
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 59 8e-08
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 59 8e-08
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 59 8e-08
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 59 8e-08
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 59 8e-08
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 59 8e-08
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 59 8e-08
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 59 1e-07
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 59 1e-07
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 59 1e-07
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 59 1e-07
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 58 1e-07
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 58 1e-07
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 58 1e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 58 1e-07
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 58 1e-07
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 58 2e-07
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 58 2e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 58 2e-07
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 58 2e-07
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 58 2e-07
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 58 2e-07
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 58 2e-07
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 58 2e-07
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 58 2e-07
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 58 2e-07
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 58 2e-07
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 58 2e-07
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 58 2e-07
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 58 2e-07
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 58 2e-07
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 57 3e-07
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 57 3e-07
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 57 3e-07
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 57 3e-07
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 57 3e-07
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 57 3e-07
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 57 3e-07
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 57 3e-07
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 57 4e-07
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 4e-07
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 57 4e-07
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 57 4e-07
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 57 4e-07
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 57 4e-07
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 57 4e-07
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 57 4e-07
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 56 6e-07
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 56 6e-07
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 56 6e-07
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 6e-07
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 56 6e-07
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 56 6e-07
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 56 6e-07
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 56 7e-07
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 56 7e-07
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 56 7e-07
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 56 7e-07
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 56 7e-07
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 56 7e-07
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 56 7e-07
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 56 1e-06
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 56 1e-06
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 56 1e-06
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 56 1e-06
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 56 1e-06
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 56 1e-06
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 55 1e-06
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 55 1e-06
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 55 1e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 55 1e-06
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 1e-06
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 55 1e-06
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 55 1e-06
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 55 1e-06
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 55 1e-06
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 55 1e-06
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 55 1e-06
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 51 2e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 55 2e-06
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 55 2e-06
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 55 2e-06
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 55 2e-06
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 55 2e-06
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 55 2e-06
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 55 2e-06
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 55 2e-06
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 55 2e-06
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 54 2e-06
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 54 2e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 54 2e-06
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 54 2e-06
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 54 2e-06
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 2e-06
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 54 2e-06
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 54 2e-06
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 54 2e-06
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 54 2e-06
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 54 2e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 54 2e-06
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 54 2e-06
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_Q873H9 Cluster: ATP-dependent rRNA helicase spb-4; n=14... 54 2e-06
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 54 2e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 54 2e-06
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 54 2e-06
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 54 3e-06
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 54 3e-06
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 3e-06
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 54 3e-06
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 54 3e-06
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 54 3e-06
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 54 3e-06
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 54 3e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 54 3e-06
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 54 4e-06
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 54 4e-06
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 54 4e-06
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 54 4e-06
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 54 4e-06
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 54 4e-06
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 54 4e-06
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 54 4e-06
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 53 5e-06
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 53 5e-06
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 53 5e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 53 5e-06
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 5e-06
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 53 5e-06
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 53 5e-06
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 53 5e-06
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 53 5e-06
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 53 5e-06
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 53 5e-06
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 53 5e-06
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 7e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 53 7e-06
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 53 7e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 7e-06
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 53 7e-06
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 53 7e-06
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 53 7e-06
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 53 7e-06
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 53 7e-06
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 53 7e-06
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 7e-06
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 52 9e-06
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 9e-06
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 52 9e-06
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 52 9e-06
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 52 9e-06
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 52 9e-06
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 52 1e-05
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 52 1e-05
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 52 1e-05
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 52 1e-05
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 52 1e-05
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 52 1e-05
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 52 1e-05
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 52 1e-05
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 52 1e-05
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 52 1e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 52 2e-05
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 52 2e-05
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 52 2e-05
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 52 2e-05
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 52 2e-05
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 52 2e-05
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 52 2e-05
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 52 2e-05
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 52 2e-05
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 52 2e-05
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 52 2e-05
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 51 2e-05
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 51 2e-05
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 2e-05
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 51 2e-05
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 51 2e-05
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 51 2e-05
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 51 2e-05
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 51 2e-05
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 51 2e-05
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 51 2e-05
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 51 3e-05
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 51 3e-05
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 51 3e-05
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 51 3e-05
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 51 3e-05
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 50 4e-05
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 50 4e-05
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 50 4e-05
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 50 4e-05
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 50 4e-05
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 4e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 50 4e-05
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 50 4e-05
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 50 4e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 50 4e-05
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 50 4e-05
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 50 4e-05
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 50 4e-05
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 50 4e-05
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 50 4e-05
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 50 4e-05
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 50 5e-05
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 5e-05
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 50 5e-05
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 50 5e-05
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 50 5e-05
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 50 5e-05
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 50 5e-05
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 50 5e-05
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 50 5e-05
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 50 5e-05
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 50 5e-05
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 50 5e-05
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 50 5e-05
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 50 5e-05
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 50 5e-05
UniRef50_P38112 Cluster: ATP-dependent RNA helicase MAK5; n=6; S... 50 5e-05
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 50 5e-05
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 50 5e-05
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 50 6e-05
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 50 6e-05
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 50 6e-05
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 50 6e-05
UniRef50_A5A159 Cluster: DEAD-box helicase; n=5; Plasmodium|Rep:... 50 6e-05
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 50 6e-05
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 50 6e-05
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 50 6e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 49 8e-05
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 49 8e-05
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 49 8e-05
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 49 8e-05
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 49 8e-05
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 49 8e-05
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 49 8e-05
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 49 8e-05
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 49 8e-05
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 49 8e-05
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 49 8e-05
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 49 8e-05
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 49 1e-04
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 49 1e-04
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 49 1e-04
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 49 1e-04
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 49 1e-04
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 49 1e-04
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 49 1e-04
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 49 1e-04
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 49 1e-04
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 49 1e-04
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 49 1e-04
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 48 1e-04
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 48 1e-04
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 48 1e-04
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 48 1e-04
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 48 1e-04
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 48 1e-04
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 48 1e-04
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 48 1e-04
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 144 bits (350), Expect = 1e-33
Identities = 69/139 (49%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
Frame = +2
Query: 227 SLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 406
++AHD+ RT+DV + EN++F S+LL + GL SGF+KPSPIQ +PLG+CGFD
Sbjct: 4 TIAHDLDAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFD 63
Query: 407 LLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLN 583
L++++KSGTGKT+VFS IALE +N + LQV+IL PTREI I DV++ +G H GL
Sbjct: 64 LIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLK 123
Query: 584 VEXVMGGLSVNEXIXKFXK 640
+E +GG + + + K K
Sbjct: 124 IESFIGGRPLEDDLKKSSK 142
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 140 bits (338), Expect = 3e-32
Identities = 67/131 (51%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Frame = +2
Query: 227 SLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 406
++AH++ RT D++I E+VTF+ M LS+ L GL++ GF KPSPIQ +PLG+CGFD
Sbjct: 4 NIAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFD 63
Query: 407 LLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLN 583
L++ AKSGTGKT VF IIALE +++ + +QV+IL PTREI I +VI +G KGL
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 584 VEXVMGGLSVN 616
VE +GG++++
Sbjct: 124 VESFIGGVAMD 134
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 136 bits (328), Expect = 6e-31
Identities = 71/145 (48%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Frame = +2
Query: 218 AVMSLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKC 397
A + AH++++ TRT DV I V F+S+LLS+ L GL +SGFQ+PSPIQL +PLG+C
Sbjct: 3 ASVKAAHELQSRTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRC 62
Query: 398 GFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHK 574
G DL+++AKSGTGKT VF+ IAL+ L L N QV++L PTREI I V+ IGS +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 575 GLNVEXVMGGLSVNEXIXKFXKKVH 649
GL +GG +++ + KK H
Sbjct: 123 GLECHVFIGGRPISQD-KQHLKKCH 146
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 128 bits (308), Expect = 2e-28
Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 2/141 (1%)
Frame = +2
Query: 233 AHDIRNS-TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDL 409
AHDI TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG+CG DL
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDL 103
Query: 410 LLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNV 586
+++AKSGTGKT VFS IAL+ L L N Q++IL PTREI I VI IG +GL
Sbjct: 104 IVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLEC 163
Query: 587 EXVMGGLSVNEXIXKFXKKVH 649
+GG +++ + KK H
Sbjct: 164 HVFIGGTPLSQDKTRL-KKCH 183
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 126 bits (305), Expect = 3e-28
Identities = 67/147 (45%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Frame = +2
Query: 215 IAVMSLAHDIRNS-TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG 391
+ ++ A D+ + TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG
Sbjct: 37 VRILRTAQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLG 96
Query: 392 KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSH 568
+CG DL+++AKSGTGKT VFS IAL+ L L N Q++IL PTREI I VI IG
Sbjct: 97 RCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIK 156
Query: 569 HKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+GL +GG +++ + KK H
Sbjct: 157 MEGLECHVFIGGTPLSQDKTRL-KKCH 182
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 113 bits (273), Expect = 3e-24
Identities = 55/105 (52%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +2
Query: 302 MLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 481
M S+ L GL GFQ+PSPIQL +PLG+CGFDL++ AKSGTGKT+VF II+LE +++
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 482 N-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+ + +QV+IL PTREI I V +G K L VE +GGL++
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAI 105
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
RT DV+ ++ F+ M LSE L GL + F PSPIQ +PL K G DLL++AKSGTG
Sbjct: 12 RTADVEFDLSLQFSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTG 71
Query: 437 KTVVFSIIALEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
KT+VF+++ E N + Q + + PTREI I DV+ +IG + +GGL +
Sbjct: 72 KTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDI 131
Query: 614 NE 619
++
Sbjct: 132 SQ 133
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 93.9 bits (223), Expect = 3e-18
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +2
Query: 224 MSLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF 403
M + I R + + N TF S+++ + TL L +S F +PSP+Q +P+G G
Sbjct: 1 MEFSEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGR 60
Query: 404 DLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGL 580
D+L++AKSGTGKT+VFS++A+E L+ + +Q +I+TPTREI I + ++++ G
Sbjct: 61 DMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGA 118
Query: 581 NVEXVMGG 604
+GG
Sbjct: 119 RTSVYVGG 126
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 93.1 bits (221), Expect = 5e-18
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
+T DV + F L L G+ ++GF++PSPIQ +P+ G D+L AK+GTG
Sbjct: 26 QTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTG 85
Query: 437 KTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
KT F I L ++N + + +Q +IL PTRE+ V K +G+H L V GG ++
Sbjct: 86 KTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTL 145
Query: 614 NEXIXKFXKKVH 649
+ I + + VH
Sbjct: 146 RDDILRLQQPVH 157
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 91.9 bits (218), Expect = 1e-17
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +2
Query: 248 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
N RT DV + F L L G+ G++KPSPIQ +P+ G D+L AK+
Sbjct: 76 NRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKN 135
Query: 428 GTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
GTGK+ + I LE+++L + +Q ++L PTRE+ + + QI H G+ V GG
Sbjct: 136 GTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGG 195
Query: 605 LSVNEXIXKFXKKVH 649
++ + I + + VH
Sbjct: 196 TNLRDDIMRLDETVH 210
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 91.9 bits (218), Expect = 1e-17
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
+T DV + TF L L G+ +GF+KPSPIQ +P+ G D+L AK+GTG
Sbjct: 36 QTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTG 95
Query: 437 KTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
KT F I LEK+ N +Q +I+ PTRE+ V++ +G H G++ GG ++
Sbjct: 96 KTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGK-HCGISCMVTTGGTNL 154
Query: 614 NEXIXKFXKKVH 649
+ I + + VH
Sbjct: 155 RDDILRLNETVH 166
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
RT D++I +N+TF+ +LL + L GL G+Q+PSPIQL +PLG G DL+ +AKSGTG
Sbjct: 33 RTNDIEIEDNITFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTG 92
Query: 437 KTVVFSIIALE 469
KT+VF +IALE
Sbjct: 93 KTIVFGVIALE 103
Score = 39.9 bits (89), Expect = 0.052
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 497 VMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
V+I+ PTREI I DVIK I + K + E +GGL+ N
Sbjct: 152 VLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLNSN 191
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Frame = +2
Query: 227 SLAHDIRNS-TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF 403
++AH++ N RT DV+ + F+++ L + GL + F+ P+ IQ +P+ G
Sbjct: 4 AIAHNLANGQNRTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 404 DLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGL 580
DLL+++KSGTGKT+++ + AL+ +L+ +V+++ PTRE+ + D+ + +G +
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSF 123
Query: 581 NVEXVMGGLSV 613
V MGG V
Sbjct: 124 KVSSFMGGTDV 134
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 84.2 bits (199), Expect = 2e-15
Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 6/137 (4%)
Frame = +2
Query: 257 RTRDVQI--VENV-TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
+T+D+Q +E V TF + LS+ L G+ S GF++PS IQ + G D+L +A+S
Sbjct: 43 QTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQS 102
Query: 428 GTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEX--VM 598
GTGKT F+I AL++++ N QV+IL P RE+ I DV+K IG + LN+E +
Sbjct: 103 GTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY---LNIEAFCCI 159
Query: 599 GGLSVNEXIXKFXKKVH 649
GG S E K + VH
Sbjct: 160 GGTSTQETREKCKQGVH 176
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+ F+ + L+ L+ L GF P+PIQ +P+ G D L +A++GTGKT FS+ L
Sbjct: 26 IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
Query: 467 EKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
KLNL+ Q +++ PTRE+ + IK +G + KGL V + GG S+ + +
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSG 145
Query: 644 VH 649
H
Sbjct: 146 AH 147
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 81.4 bits (192), Expect = 2e-14
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = +2
Query: 239 DIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
D N T D VTFT + +++ L+ L SG+ P+PIQ +P G DLLL
Sbjct: 28 DTNNEAATTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLS 87
Query: 419 AKSGTGKTVVFSIIALEKL----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNV 586
A++G+GKT F I L++L + + + +ILTPTRE+ + D ++ +GL
Sbjct: 88 AQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFC 147
Query: 587 EXVMGGLSVNEXIXKFXKKV 646
++GG N I K V
Sbjct: 148 VPLVGGAPYNGQITALKKGV 167
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/116 (35%), Positives = 67/116 (57%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + +S+ T+ L S GF++P+PIQ +P G D+L +A++GTGKT F I +EK
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
+ G+Q +IL PTRE+ + + +++ S +G+ V V GG+ + I K
Sbjct: 64 VVGKQGVQSLILAPTRELAMQVAEQLREF-SRGQGVQVVTVFGGMPIERQIKALKK 118
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 80.2 bits (189), Expect = 4e-14
Identities = 40/112 (35%), Positives = 63/112 (56%)
Frame = +2
Query: 308 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 487
L +F L G+ +GF PSP+Q +P+ G DL+ +A++GTGKT F+I L LN N
Sbjct: 52 LKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNK 111
Query: 488 GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
++ +I+TPTRE+ I + I ++G + + + GG S+ KK
Sbjct: 112 DIEALIITPTRELAMQISEEILKLGRFGR-IKTICMYGGQSIKRQCDLLEKK 162
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/113 (34%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFS 454
VE + F + LS+ L + + GF+KP+ IQ+ +PL ++++ +A++G+GKT F+
Sbjct: 3 VEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFA 62
Query: 455 IIALEKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
I +E +N NNG++ +ILTPTRE+ + D I+ + +K L + + GG ++
Sbjct: 63 IPLIELVNENNGIEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAI 114
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/109 (34%), Positives = 63/109 (57%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+ F + + E +I GF++PSPIQ +P G D++ +A++GTGKT F I +
Sbjct: 6 IKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV 65
Query: 467 EKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
EK++ +Q +ILTPTRE+ + I+++ S HK + + GG S+
Sbjct: 66 EKVSTGRHVQALILTPTRELAIQVSGEIQKL-SKHKKIRTLPIYGGQSI 113
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 469
F + L+E L +I GF+ P+ +Q +P L + DL+ A++GTGKT F ++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 470 KLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
K++ NN Q +IL+PTRE+ I + +K + KG+NV V GG S+ E
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITE 114
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF + LSE L L GF++PSPIQ +P G D++ +A++GTGKT F + +
Sbjct: 6 LTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIV 65
Query: 467 EKL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
E+L +Q ++LTPTRE+ + + I +IG H + + + GG S+ I
Sbjct: 66 ERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHAR-VKTIAIYGGQSIERQI 118
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
+T V E V F S+ L E L+ ++S GF + IQ +P G D+L EA++GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 437 KTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
KT F + AL K++ + Q+M+L PTRE+ + + I+ G KGL V + GG S
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQS 123
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 77.8 bits (183), Expect = 2e-13
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +2
Query: 263 RDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 442
R V + +N F+++ LS L + GF+ +PIQ +PL G D++ +AK+G+GKT
Sbjct: 40 RGVPVSQN-EFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKT 98
Query: 443 VVFSIIALEKLNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
FS+ L K+NL+ LQ +IL PTRE+ + + I+++G GL V + GG S E
Sbjct: 99 AAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +2
Query: 260 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 439
TR + + ++ F M LSE L G+ P+P+Q G DL++ +K+GTGK
Sbjct: 20 TRPAEYIADIGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGK 79
Query: 440 TVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
T F + LEK+ + ++ +IL PTRE+ + D +K + + HKGL + + GG S+
Sbjct: 80 TAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKML-AKHKGLKIAAIYGGASMK 138
Query: 617 E 619
+
Sbjct: 139 Q 139
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS + + S G+ + +PIQ +P+ G DL +A++GTGKT F I A+E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 473 LNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
++++ N Q +IL PTRE+ +C +K++ KGL V V GG S+ I H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/107 (36%), Positives = 60/107 (56%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM L L + GF+KP+PIQ+ +P+ G DL+ +A++GTGKT F I L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+ GLQ ++L PTRE+ + + I + S + V + GG S+
Sbjct: 66 VIKGEGLQALVLCPTRELAVQVTEEISSL-SRRMRIQVLAIYGGQSI 111
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
E TF +SE L + GF++P+PIQ +P G D+ +A++GTGKT F I
Sbjct: 3 ETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIP 62
Query: 461 ALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
+E+L+ +N +Q ++L+PTRE+ + ++ + KGLNV + GG + +
Sbjct: 63 IIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQL 118
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 76.6 bits (180), Expect = 5e-13
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
Q+ EN F S+ LS L GL S G+ KPSPIQ +P+ G D++ A +G+GKT F
Sbjct: 228 QMYEN--FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAF 285
Query: 452 SIIALEKLNLN----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
I +E+L +V++L PTRE+ + DV KQI G+ +GGL++ +
Sbjct: 286 MIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQ 345
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 75.8 bits (178), Expect = 8e-13
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
+T DV + F L L G+ G++ PS IQ +P+ G D+L AK+GTG
Sbjct: 72 KTLDVTSTKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTG 130
Query: 437 KTVVFSIIALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
K+ + I LE+L+L + +Q M++ PTRE+ + + Q+ H G V GG ++
Sbjct: 131 KSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNL 190
Query: 614 NEXIXKFXKKVH 649
+ + + H
Sbjct: 191 RDDVMRLDDTGH 202
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 75.8 bits (178), Expect = 8e-13
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 9/131 (6%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
+ +F + L E L ++GF PSP+QL VPLG+ G D++ +AKSGTGKT+ F +IA
Sbjct: 36 SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIA 95
Query: 464 LEKLNL-NNGLQVMILTPTRE--IXAXIC--DVIKQI----GSHHKGLNVEXVMGGLSVN 616
LE+++ Q + L PTRE + C ++I++ G G+ ++GGL V
Sbjct: 96 LERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVK 155
Query: 617 EXIXKFXKKVH 649
E + + H
Sbjct: 156 EDRARLASQPH 166
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Frame = +2
Query: 311 SEFTLAGLISS-----GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL 475
SEF ++G I+ GF+ +PIQ +P+ G D++ EA++GTGKT F+I LE L
Sbjct: 7 SEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENL 66
Query: 476 NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
Q +I+ PTRE+ + + IK+IG + K + V V GG S+ I + + VH
Sbjct: 67 EAERVPQALIICPTRELCLQVSEEIKRIGKYMK-VKVLAVYGGQSIGNQIAQLRRGVH 123
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 74.9 bits (176), Expect = 1e-12
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
+IV+N F M L E L G+ + GF+KPS IQ + G+D++ +A+SGTGKT F
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATF 87
Query: 452 SIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIX 628
+I L++L + Q ++L PTRE+ I VI +G + G +GG +V +
Sbjct: 88 AISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGD-YMGATCHACIGGTNVRNEMQ 146
Query: 629 K 631
K
Sbjct: 147 K 147
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLL-EAKSGTGKTVVFSIIALE 469
F M LS+ L+ + G++ P+PIQ +PL G + ++ +A++GTGKT F I +E
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
+L+ N +Q ++LTPTRE+ +C+ I + +K LN+ V GG+S+ I ++V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSL-KGNKRLNLLPVYGGVSIGNQIRALKRRV 122
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/101 (40%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 439
T DVQ N TF S+++ + TL +K +Q +P+G G D+L++AKSGTGK
Sbjct: 15 TLDVQ--SNCTFESLMIGQKTL--------EKLKSVQAKAIPVGLLGRDMLVQAKSGTGK 64
Query: 440 TVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQI 559
T+VFS++A+E L+L + +Q +I+TPTREI I + ++++
Sbjct: 65 TLVFSVLAVENLDLKAHYIQKVIITPTREISTQIKETVRKL 105
>UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 729
Score = 73.7 bits (173), Expect = 3e-12
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Frame = +2
Query: 257 RTRDVQIVENV-TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 433
R D+ + E+ FT + LSE TL+GL +S ++ + IQ V G D+L AK+G+
Sbjct: 35 RVEDLDLKESFKAFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGS 94
Query: 434 GKTVVFSIIALEKLNL-----NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVM 598
GKT+ F I LE L ++GL +IL+PTRE+ I +V++++G +H + V+
Sbjct: 95 GKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKVGRYHH-FSAGLVI 153
Query: 599 GGLSVNEXIXKFXK 640
GG S+ E + K
Sbjct: 154 GGKSLKEEQERLGK 167
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + LS TL GL G+ KP+ IQ + LG G D+L A++G+GKT+ F I LE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 470 KLNLN-----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
+L +GL +++TPTRE+ I + ++++G HH+ + ++GG
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHE-FSAGLIIGG 160
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ + +S TL GL + G+ + + IQ +P G D++ +A++G+GKT+ + I LE
Sbjct: 73 FSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIPILEN 132
Query: 473 LNLNN-----GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+ +N GL +ILTPTRE+ + + DVIK+IG H L+ ++GG +
Sbjct: 133 IYRDNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDI 184
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +2
Query: 266 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 445
D +I + F + +S+ TL GL S F K + IQ +P+ G D+L AK+G+GKT+
Sbjct: 34 DPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTL 93
Query: 446 VFSIIALEKLNLN-----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
F + +EKL +GL +I++PTRE+ I +V+ +IGS H + V+GG
Sbjct: 94 AFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGS-HTSFSAGLVIGGKD 152
Query: 611 VNEXIXKFXK 640
V + + +
Sbjct: 153 VKFELERISR 162
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 72.9 bits (171), Expect = 6e-12
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +2
Query: 404 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGL 580
DL+++AKSGTGKT VFS+IALE ++L N QV+IL PTREI I D I+ IG +GL
Sbjct: 5 DLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGL 64
Query: 581 NVEXVMGGLSVNEXIXKFXKKVH 649
+GG K KK H
Sbjct: 65 RSHVFIGGTLFGPDRQKL-KKCH 86
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
++ + M LS A L ++ + +PSPIQ +PL G D+L +A++GTGKT F I
Sbjct: 3 DINYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPI 62
Query: 464 LEKLN---LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
+E+L + Q +ILTPTRE+ + D I ++ +H + +NV V GG + + K
Sbjct: 63 IERLEHGPNSRNPQALILTPTRELAVQVRDEIAKL-THGQRINVVAVYGGKPLRSQMEKL 121
Query: 635 XKKVH 649
+ H
Sbjct: 122 KRAPH 126
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + LS+ L + S GF++ +PIQ +P G D++ +A++GTGKT F + L+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
K++ + +Q +++ PTRE+ + + + +IG HK + + + GG +N I K
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQIRALKKHP 121
Query: 647 H 649
H
Sbjct: 122 H 122
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F M L L L + F P+PIQL +P G D+L EA++GTGKT F + AL
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 467 EKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
K++ + QV+++TPTRE+ + + ++ + +G+ V V GG
Sbjct: 68 AKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGG 114
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/117 (29%), Positives = 67/117 (57%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + + + L + F++P+ IQ +PL G D++ A +G+GKT+ F ++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 470 KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
K+ NG++ ++LTPTRE+ + + +K+ S HK L V + GG+++N I + +
Sbjct: 63 KIEKGNGIRALVLTPTRELAEQVQNSLKEF-SRHKQLRVAPIYGGVAINPQIRQLER 118
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 72.5 bits (170), Expect = 8e-12
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT + L E T +GL +S F+ + +Q +PL G D+L AK+G+GKT+ F + LEK
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 473 L-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L +GL +I++PTRE+ I +V+++IG +H + V+GG S+ E
Sbjct: 115 LYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNH-FFSAGLVIGGKSLKE 167
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
+T DV + F L L G+ G++KPSPIQ +P+ G D+L AK+GTG
Sbjct: 86 KTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTG 145
Query: 437 KTVVFSIIALEKLNL-NNGLQVMILTPTREIXAXICDV 547
K+ + I LE+L+L + +Q M++ PTRE+ + +
Sbjct: 146 KSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + LS+ + + GF++ +PIQ +PL D++ +A++GTGKT F I +E
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 470 KLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
K+N+ N+ +Q +++ PTRE+ + + + +IG+ K + V + GG + I K
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDIERQIRALKKHP 121
Query: 647 H 649
H
Sbjct: 122 H 122
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM LS L G++ G++ P+PIQ +PL G D++ A++G+GKT F I EK
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 473 LNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L + G + +IL+PTRE+ IK++G GL ++GG
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELG-RFTGLKATIILGG 143
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS+ + + G++ PSPIQ +P G D+L +A++GTGKT F++ L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 473 LNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
LN QV++L PTRE+ + + ++ + G V V GG S + + + VH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 71.7 bits (168), Expect = 1e-11
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
V+FT L +A L+ GF +P+PIQ +PL G DL+ +A++GTGKT F + L
Sbjct: 55 VSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL 114
Query: 467 EKLNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
++ + +Q ++L PTRE+ + D + S G NV V GG S
Sbjct: 115 NNIDFSKKCVQALVLAPTRELAQQVGDALATY-SGDDGRNVLVVYGGSS 162
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 71.7 bits (168), Expect = 1e-11
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
R + + + F S+ + E L + G+Q P+PIQ +PL G DLL A++GTG
Sbjct: 72 RNQTTDHTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTG 131
Query: 437 KTVVFSIIALEKLNL------NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVM 598
KT F+I L+ LN ++ +I+TPTRE+ I + K G H GL +
Sbjct: 132 KTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYG-RHTGLTSTVIF 190
Query: 599 GGLSVNEXIXKFXKKV 646
GG++ N K +
Sbjct: 191 GGVNQNPQTASLQKGI 206
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 71.7 bits (168), Expect = 1e-11
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 469
F + LS+ L GL GF+ P+ IQ +P L K D + A++GTGKT F + L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 470 KLNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
+++N+ +Q +IL PTRE+ IC ++Q+ H LNV V GG ++ I
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQI 127
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
R +++ E F+ +S+ TL GL+ +GF P+ IQ G+P+ G D+L AK+G+G
Sbjct: 40 RCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSG 99
Query: 437 KTVVFSIIALE-----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMG 601
KT+ F I +E K +GL ++++PTRE+ +V+ +IG+ H L+ ++G
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH-DLSAGLIIG 158
Query: 602 G 604
G
Sbjct: 159 G 159
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/113 (29%), Positives = 61/113 (53%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT L + A + +GF++PSP+Q +PL G D++ +A++GTGKT F + +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
+ + ++ +++ PTRE+ + D + + G GL V GG + + I +
Sbjct: 63 MKADGSVEGLVIVPTRELAMQVSDELFRFGK-LSGLKTATVYGGTAYGKQIER 114
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
+E +F+ + LS + + G+++P+PIQ +PL G D+ +A +GTGKT F I
Sbjct: 1 MEIPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGI 60
Query: 458 IALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
A+E N +Q ++L P+RE+ + + ++ H KG+++ V GG + I
Sbjct: 61 PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKAL 120
Query: 635 XKKV 646
+ V
Sbjct: 121 SRGV 124
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM LS+ + G++ G++ P+PIQ +P+ G D++ A++G+GKT F I EK
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 473 L---NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
L G + +IL+PTRE+ IK+IG GL ++GG S++
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIG-RFTGLKSSVILGGDSMD 149
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF L+E L L S G+ PS +Q +P G +L++ +K+G+GKT F+I E
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
+N++ N +Q +I+ PTRE+ + D I IG K + + G S+ + I + ++V
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIG-RLKKVRCSAIFGKQSIKDQIAELKQRV 122
Query: 647 H 649
H
Sbjct: 123 H 123
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF +M L E L G+ + GF+KPS IQ + G D++ +++SGTGKT FSI L+
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
L++ Q +IL PTRE+ I + +G + + +GG +V E I K
Sbjct: 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGD-YMNVQCHACIGGTNVGEDIRKLDYGQ 157
Query: 647 H 649
H
Sbjct: 158 H 158
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + L L L G++ PSPIQ +P G DLL EA++GTGKT F++ L+
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
+L+L QV++L PTRE+ + + ++ + G +V V GG S+ + + +
Sbjct: 105 RLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGA 164
Query: 647 H 649
H
Sbjct: 165 H 165
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 70.5 bits (165), Expect = 3e-11
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SE L L G+ PSPIQ P G DL+ +A++GTGKT F++ LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 473 LNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
L QV++L PTRE+ + D K + H L V V GG I + V
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGV 191
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + L L L G++KPSPIQ +P G D+L A++G+GKT FS+ L+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L+ Q+++L PTRE+ + + + H +G+NV + GG
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 112
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
N++F + +S+ + L GF P+ IQ +P G D++ ++++GTGKT FS+
Sbjct: 2 NLSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPI 61
Query: 464 LEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
LE+L+ +Q ++LTPTRE+ + D + Q + GL + GG S++ + + +
Sbjct: 62 LERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG-NSGLRTLAIYGGQSIDRQMLQLKR 120
Query: 641 KVH 649
VH
Sbjct: 121 GVH 123
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + L+ L L +G+ KP+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 473 LNL------NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
L NG +V++L PTRE+ + I D + S H+ + V + GG+S
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESF-SRHQPVRVTTIFGGVS 119
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F ++ L L + G++ P+PIQ +P G DLL +A++GTGKT F++ +EK
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 473 LNLNNGL--QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
L N L +V+++TPTRE+ + + K S + GG I +KV
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Frame = +2
Query: 314 EFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN--- 484
+FTL L G+++P+PIQ +PL G DLL EA++GTGKT F++ +EKL+ N
Sbjct: 16 QFTLKNL---GYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPID 72
Query: 485 --NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
++ ++L PTRE+ + D + G G+ V V GG+ V I + +
Sbjct: 73 GYRPVRALVLAPTRELAIQVADNTLEYG-RDLGMRVISVYGGVPVENQIKRLKR 125
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + +SE L S +P+P+QL +P D++ +A++GTGKT+ F + LE+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 473 LNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+N+ +Q +I+TPTRE+ I K++ + KG+N+ GG V + + K +H
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKL-AEVKGINILAAYGGQDVEQQLRKLKGSIH 123
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS L L S G++ PSPIQ + D++ +A++GTGKT F + L+K
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 473 LNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+NLN N Q++IL PTRE+ + + ++ KG +V + GG S + + + VH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF LS + + GF++ +PIQ +PLG D++ +A++GTGKT F I +
Sbjct: 3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62
Query: 467 EKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
EK+N + +Q +++ PTRE+ + + + +IG K V + GG + I K
Sbjct: 63 EKINPESPNIQAIVIAPTRELAIQVSEELYKIG-QDKRAKVLPIYGGQDIGRQIRALKK 120
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 69.3 bits (162), Expect = 7e-11
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT + L++ L L G+ P+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 473 LNLN------NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
L + G + ++L+PTRE+ I + + G H GL V + GG+
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGK-HMGLTVATIFGGV 176
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 69.3 bits (162), Expect = 7e-11
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
+NV F + L + L+ + ++G++KP+PIQ + + G D L+ AK+GTGKT F+I
Sbjct: 3 KNVQFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIP 62
Query: 461 ALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
AL+ L QV+ILTP RE+ I ++G + V V GG
Sbjct: 63 ALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGG 111
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 69.3 bits (162), Expect = 7e-11
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
+I E +F+ LS+ TL GL + KP+ IQ + G D+L AK+G+GKT+ F
Sbjct: 57 KIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAF 116
Query: 452 SIIALEKLNLN-----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
I EKL N +GL +I+TPTRE+ I + + +IG H ++GG
Sbjct: 117 LIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLH-DFTTGLIIGG 171
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 68.9 bits (161), Expect = 1e-10
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF ++ L E L L G+ P+PIQ +P+ G DLL A++GTGKT FSI L
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 467 EKL---NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
+KL + G++ ++LTPTRE+ I + + G + GL + GG+
Sbjct: 61 QKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG-RYTGLKHAVIFGGV 109
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +2
Query: 266 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 445
D E F ++ + LA + + G+++PSPIQ +P+ G D++ +A++GTGKT
Sbjct: 16 DPMTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTA 75
Query: 446 VFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
F++ L +++ Q++IL PTRE+ + + S G+ V V GG
Sbjct: 76 AFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGG 129
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/122 (28%), Positives = 65/122 (53%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
+ +F + LS LA L +GF+ P+PIQ +P G D++ A +GTGKT F +
Sbjct: 1 MSTTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLL 60
Query: 458 IALEKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFX 637
+++L G + ++L PTRE+ I + +++ G H + + ++GG+ + +
Sbjct: 61 PLIDRLAGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGMAQQAEALR 119
Query: 638 KK 643
+K
Sbjct: 120 QK 121
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LSE L L G++ PSPIQ +PL D+L +A++GTGKT F++ L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 473 LNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+++ Q ++L PTRE+ + + ++ ++ G +V + GG S + + VH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 68.5 bits (160), Expect = 1e-10
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Frame = +2
Query: 251 STRTRDVQIVENVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
S+ RD + + +T F M LS+ L ++ F P+P+Q +P G D+L A++
Sbjct: 14 SSHKRDPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQT 73
Query: 428 GTGKTVVFSIIALEKLNLNN--GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMG 601
GTGKT+ F I ALE L G+QV+IL PTRE+ + V +Q+ K + VMG
Sbjct: 74 GTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQL-KGKKLKSAALVMG 132
Query: 602 GLSVNEXI 625
G S I
Sbjct: 133 GTSERNQI 140
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F M+L+E L G+ + GF+KPS IQ + GFD++ +++SGTGKT + I AL+
Sbjct: 22 SFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAALQ 81
Query: 470 KLN-LNNGLQVMILTPTREIXAXICDVI 550
+++ + Q +IL PTRE+ I V+
Sbjct: 82 RIDMMKEDTQAIILAPTRELANQIQKVV 109
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
V + TF + L L+ L + G++ PS IQ +P G D+L +A++GTGKT F++
Sbjct: 6 VASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFAL 65
Query: 458 IALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
L +L+L QV++L PTRE+ + Q G KGL V + GG E +
Sbjct: 66 PLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQL 122
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 467 EKLNLNN-----GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
E L+ N ++ ++LTPTRE+ A + + ++ G + L V GG+ +N I K
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +2
Query: 230 LAHDIRNST-RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 406
+AH + R+ DV + TF + L L GL + F P+ IQ +P+ D
Sbjct: 5 IAHSLAGGEERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMD 64
Query: 407 LLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLN 583
L++++KSGTGKT+++ I ++ N N N MI+ PTRE+ + D + +
Sbjct: 65 LIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFK 124
Query: 584 VEXVMGGLSV 613
+GG V
Sbjct: 125 CSAFIGGTDV 134
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/86 (37%), Positives = 53/86 (61%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ M LS+ L + + GF+KPS IQ +P G ++++++KSGTGKT+ ++ L
Sbjct: 53 FSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCGVLGN 112
Query: 473 LNLNNGLQVMILTPTREIXAXICDVI 550
+ QVM++TPTRE+ + +VI
Sbjct: 113 TKIGERTQVMVVTPTRELSTQVTEVI 138
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + LS L + G++KP+PIQ +PL G DL A +G+GKT F++ LE
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 470 KLNLNN----GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
+L +V+ILTPTRE+ I +I+ + + + ++GGLSV E
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNL-AQFTDIKCGLIVGGLSVRE 280
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
+ NG + V+++ TRE+ I ++ + + V GGLS+ +
Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKK 155
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
+ N+ F + L E L + GF++PS IQ +P+ G D++ +A++GTGKT F
Sbjct: 1 MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60
Query: 458 IALEKLNLN---NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
+ + + + +IL PTRE+ + + + ++G H K L+V + GG ++ I
Sbjct: 61 AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEK-LSVLPIYGGQPIDRQI 118
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 67.3 bits (157), Expect = 3e-10
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + +SE L +G + +PIQ +P+ G D++ +AK+GTGKT+ F + LEK
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 473 LN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
++ ++ +Q +I+ PTRE+ I IK++ + +NV + GG V + + K H
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + L E L + GF +PSPIQ +P G D++ +A++GTGKT F + L+
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 470 KLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
+++ + +Q ++L PTRE+ + + + + H +G+ + V GG
Sbjct: 66 RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGG 111
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 67.3 bits (157), Expect = 3e-10
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 467 EKLNLNN-----GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
E L+ N ++ ++LTPTRE+ A + + ++ G + L V GG+ +N I K
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 67.3 bits (157), Expect = 3e-10
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
+++F + LS L + G+ +PS IQ +P G D++ A++GTGKT F++
Sbjct: 4 SMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL 63
Query: 464 LEKLN-----LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
LE L+ +N ++ ++LTPTRE+ A + + +K G H L V GG+ +N
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYG-QHLSLKSTVVFGGVKIN 118
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F L + + +G+ +P+ +Q +P+ G DL++ +K+G+GKT + I +
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
G++ +IL PTRE+ + V + +G G+ V GG+S+N+ I
Sbjct: 64 TAKEKGIRALILLPTRELAVQVAKVSEALGK-RSGIRTVVVYGGVSINKQI 113
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
V FT + L+ + + GF++ +PIQ +PL G DL+ +A++GTGKT F I +
Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 467 EKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
E + + G+Q +++ PTRE+ + + + +IG +G+ + GG + +
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGK-VRGIRSVAIYGGQDFRSQVKALEEL 120
Query: 644 VH 649
H
Sbjct: 121 PH 122
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 469
FT + LS+ T GL +G+ + IQ + L G D+L A++G+GKT+ F I LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEI 119
Query: 470 ----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
K ++GL ++++PTRE+ I +V+++IGS+H + V+GG V +
Sbjct: 120 LYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHT-FSAGLVIGGKDVKQ 172
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 54.4 bits (125), Expect(2) = 3e-10
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF S+ LS ++ L ++G+ KP+P+Q +P G G DLL+ + +G+GKT F + A+E
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 103
Query: 470 K 472
+
Sbjct: 104 R 104
Score = 32.7 bits (71), Expect(2) = 3e-10
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 497 VMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
+++LTPTRE+ + G H + L ++GG++ + + K
Sbjct: 140 LLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAK 187
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 66.9 bits (156), Expect = 4e-10
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +2
Query: 314 EFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL 493
++ L LI+ +P+PIQL +PL +++ A +GTGKT+ F + L L+L+ L
Sbjct: 9 KWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILNNLDLSQKL 68
Query: 494 QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
QV+I+TPTRE+ I I H L V+ ++GG S+++ I
Sbjct: 69 QVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQI 112
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = +2
Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 523
GF+ P+PIQ +PL G +L+ +A +GTGKT + + L+++ QV+I+TPTRE
Sbjct: 21 GFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE 80
Query: 524 IXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
+ + D + ++G + K + V GG ++ I
Sbjct: 81 LALQVADEVAKLGKYLK-VRALAVYGGQAIERQI 113
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
EN+ F + L L GL G++ PS IQ +PL D+L +K+GTGKT+ F I
Sbjct: 13 ENLKFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIP 72
Query: 461 ALEKL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE 589
L+ + + + G++ +IL PTRE+ I +++++ + K +N++
Sbjct: 73 ILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQ 116
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 66.9 bits (156), Expect = 4e-10
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS+ T+ GL S + + IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 72 FDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFLIPVLEK 131
Query: 473 L-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L +G+ +I++PTRE+ + DV+K +G +H + ++GG
Sbjct: 132 LYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYH-SFSAGLLIGG 179
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 66.9 bits (156), Expect = 4e-10
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLH--GVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
F M L L G+ S GF+ PS IQ G ++ +A+SGTGKT FSI L
Sbjct: 93 FDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVL 152
Query: 467 EKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
K++++ Q ++L PTRE+ I +V K+IGS GL++ +GG
Sbjct: 153 SKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGG 199
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 66.5 bits (155), Expect = 5e-10
Identities = 38/119 (31%), Positives = 61/119 (51%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+++ LS L + F+KP+ IQ +P G DLL A +G+GKT+ + + LEK
Sbjct: 3 FSTLSLSS-ELIHALPKDFKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEK 61
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
L +N + +IL P RE+ + + I Q+G GLN + GG+ + + H
Sbjct: 62 LGVNPEQKALILVPIRELATQVSEAINQVG-QALGLNAVCLCGGVDKEQQLQALATNPH 119
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 66.5 bits (155), Expect = 5e-10
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF + L++ L L G++KPSPIQ +P G D+L A++GTGKT F+ L
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 467 EKLN----LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
++L ++ +ILTPTRE+ I + + G H L + GG+ + K
Sbjct: 61 QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGK-HLPLRSAVIFGGVGQQPQVDKL 119
Query: 635 XKKV 646
K V
Sbjct: 120 KKGV 123
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 66.5 bits (155), Expect = 5e-10
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCG-FDLLLEAKSGTGKTVVFSIIAL 466
+F ++ LS+ L L GF P+PIQ +P+ G D++ +A++GTGKT F I L
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 467 EKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
E ++ + Q +IL PTRE+ + + I I K LNV V GG S++ I + +
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELRRG 121
Query: 644 V 646
V
Sbjct: 122 V 122
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 66.5 bits (155), Expect = 5e-10
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+FT+M LS L L S F P+PIQ +PL G D+L A +G+GKT F + LE
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 470 KLNLNN------GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE--XVMGGLSVN 616
+L + +V++L PTRE+ A C+ + + + GL+V ++GGLS+N
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTREL-AVQCEAVGKALAEKGGLDVRFALLVGGLSLN 338
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 66.5 bits (155), Expect = 5e-10
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
Q EN++F M LS L + + GF++P+PIQ +P+G G D+ A +GTGKT F
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAF 272
Query: 452 SIIALEKLNLNNG----LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
++ LE+L +V++L PTRE+ + V +Q+ + + +GGL V
Sbjct: 273 ALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQL-AQFCNITTCLAVGGLDV 329
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 66.1 bits (154), Expect = 7e-10
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +2
Query: 239 DIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 134 DTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM 193
Query: 419 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE 589
A++G+GKT F I EKL ++ G + ++L+PTRE+ K++G GL +
Sbjct: 194 ARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGK-FTGLKMA 252
Query: 590 XVMGG 604
++GG
Sbjct: 253 LILGG 257
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 66.1 bits (154), Expect = 7e-10
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Frame = +2
Query: 266 DVQIVENVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 442
D+ E+V F + L L L + G+++P+PIQ VP G DLL +A +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 443 VVFSIIALEKL----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
F++ L +L ++G Q ++L PTRE+ + + I + G G V V GG
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYG-RDLGARVLPVYGGAP 167
Query: 611 VNEXI 625
+ +
Sbjct: 168 IGRQV 172
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 66.1 bits (154), Expect = 7e-10
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L G + V+++ TRE+ I ++ + + V GGLS+ +
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F LL L ++ SGF+ PS +Q +P G D++ +AKSG GKT VF + L++
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+ + G + ++L TRE+ IC+ + ++ V GG+++
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 65.7 bits (153), Expect = 9e-10
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +2
Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 508
L +G+++P+PIQ +PL G+D+L +A +GTGKT F+I +EKL ++ ++L
Sbjct: 15 LEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVL 74
Query: 509 TPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
TPTRE+ + + I + + +K L+ GG SV + +
Sbjct: 75 TPTRELAIQVKEQIYML-TKYKRLSSYVFYGGTSVKQNL 112
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 65.7 bits (153), Expect = 9e-10
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Frame = +2
Query: 239 DIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 21 DTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAM 80
Query: 419 AKSGTGKTVVFSIIALEKL---NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE 589
A++G+GKT F I E+L G + +IL+PTRE+ K++G K L
Sbjct: 81 ARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTK-LKTA 139
Query: 590 XVMGGLSVNE 619
++GG S+++
Sbjct: 140 LILGGDSMDD 149
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 65.7 bits (153), Expect = 9e-10
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F +M LS L ++ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 473 L---NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
L + +G + ++LTPTRE+ IKQ+G L V+GG S++
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGK-FTDLKTILVLGGDSMD 149
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 65.7 bits (153), Expect = 9e-10
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Frame = +2
Query: 239 DIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 80 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAM 139
Query: 419 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE 589
A++G+GKT F + E+L ++ G + +IL+PTRE+ K++G GL
Sbjct: 140 ARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGK-FTGLKTA 198
Query: 590 XVMGG 604
++GG
Sbjct: 199 LILGG 203
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 65.7 bits (153), Expect = 9e-10
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
E F+ + +S T GL SS F P+PIQ +P D+L AK+G+GKT+ F I
Sbjct: 58 EITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIP 117
Query: 461 ALEKLNLN-----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
LE+L L +GL ++++PTRE+ ++ IG +H + V+GG + E
Sbjct: 118 LLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYH-NFSAGLVIGGKPLKE 174
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 473 L--NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L + NN V+++ TRE+ I ++ + + V GG+++ +
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQK 153
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 65.3 bits (152), Expect = 1e-09
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
E +F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F +
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 350
Query: 461 ALEKLNLN----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
LE+L +V+ILTPTRE+ A C + + H + +GGLS+
Sbjct: 351 ILERLLYRPKKVPTTRVVILTPTREL-AIQCHAVAVKLASHTDIKFCLAVGGLSL 404
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 65.3 bits (152), Expect = 1e-09
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F + LE
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 470 KLNLN----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+L +V++LTPTRE+ V ++ S H + +GGLS+
Sbjct: 337 RLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLAS-HTDIKFCLAVGGLSL 387
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 65.3 bits (152), Expect = 1e-09
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +2
Query: 260 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 439
+ DV+ E + + S+ L L + G+ PSP+Q+ +P G +LL+ +K+GTGK
Sbjct: 99 SEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGK 158
Query: 440 TVVFSIIALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
T + + L +N + +Q +IL P RE+ I +K++ S G+ V+GG S+
Sbjct: 159 TASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRM-SEGTGVISAPVVGGTSMQ 217
Query: 617 EXIXKFXKKVH 649
+ I + VH
Sbjct: 218 DDIIRVSNGVH 228
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + LS+ L + GF++P+PIQ +PL G D++ A++G+GKT F + LE
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 470 KLNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
KL +++ G + +IL+P+RE+ V+K S L + ++GG S+ E
Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDF-SAGTDLRLAMLVGGDSLEE 214
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
++ + F+ + LS ++ GF++ SPIQ +P+ G D++ A++GTGKT F+I
Sbjct: 6 MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI 65
Query: 458 IALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
+E L + + LQ +IL PTRE+ + + +++ + V + GG + +
Sbjct: 66 PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRAL 125
Query: 635 XK 640
K
Sbjct: 126 RK 127
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F S+ L +F L S G++ +PIQ +PL G D++ A++GTGKT F++ L
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 473 LNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+++ Q ++L PTRE+ + + + G GL + + GG + + + + H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Frame = +2
Query: 239 DIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
D + + I+ N TF S+ LS+ T + GF + + IQ +P G D+L
Sbjct: 138 DKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGA 197
Query: 419 AKSGTGKTVVFSIIALE-----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLN 583
A++G+GKT+ F I A+E K NG V+++ PTRE+ V K++ +H
Sbjct: 198 ARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYH-SQT 256
Query: 584 VEXVMGG 604
V V+GG
Sbjct: 257 VGKVIGG 263
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 64.9 bits (151), Expect = 2e-09
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Frame = +2
Query: 308 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN- 484
LS L L +GF KP PIQ +P GFD++ +A +G+GKT+ F I LE N
Sbjct: 129 LSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNV 188
Query: 485 --NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+Q +++ PTRE+ IC + I + V + GGL+V + K H
Sbjct: 189 DAKYVQALVVAPTRELAHQICQHFELI-KPSPNIRVMSITGGLAVQKQQRLLNKHPH 244
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F + L L + +G+ +P+PIQ +P +L A++GTGKT F + L
Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60
Query: 467 EKLNLN----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
+KL N G +V+I++PTRE+ I D IK+ S + +N + GG+S F
Sbjct: 61 DKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKY-SRYLRINSITITGGISYGLQNRMF 119
Query: 635 XKKV 646
K +
Sbjct: 120 SKPI 123
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF + LS+ L L + F + + IQ +PL G ++ ++ +GTGKT F + L
Sbjct: 1 MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL 60
Query: 467 EKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
EK+ N +Q +I+ PTRE+ I + I+ GS + L + ++GG + + I +
Sbjct: 61 EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKR 116
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F S + L + G+Q +P+Q +P + G D+L A++GTGKT F++ L+K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 473 LN------LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
++ ++ + +ILTPTRE+ A + D I S H ++V + GG+ +
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAY-SKHMNISVLTIYGGMKM 114
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 64.5 bits (150), Expect = 2e-09
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ + LS+ L L G+ P+PIQ +P G DLL A++GTGKT F + ++++
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 473 L-NLNNGL-----QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
L +N + ++++L PTRE+ + I K G+ GL V+ ++GG SVN+ K
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGA-LAGLKVQSIVGGTSVNKDRNKL 122
Query: 635 XK 640
+
Sbjct: 123 HR 124
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Frame = +2
Query: 242 IRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEA 421
++++ + + + E TF + LS L + GF +P+PIQ +PL G D+L A
Sbjct: 175 LQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASA 234
Query: 422 KSGTGKTVVFSIIALEKLNLNN----GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE 589
+G+GKT F + LE+L + ++V+IL PTRE+ A C + + + +
Sbjct: 235 STGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTREL-ALQCQSVMENLAQFSNITSC 293
Query: 590 XVMGGLS 610
++GGLS
Sbjct: 294 LIVGGLS 300
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSI 457
N+ ++ + LS L G+ + GF KPS IQ +PL G C +++ +AK+G+GKT F++
Sbjct: 98 NMQWSQLPLSPDLLKGIQNMGFAKPSKIQQCALPLILGSCT-NIIAQAKNGSGKTATFAL 156
Query: 458 IALEKLNLNNGL-QVMILTPTREIXAXICDVIKQIG 562
L K+N+N L Q + + PTRE+ VI+++G
Sbjct: 157 AMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLG 192
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +2
Query: 224 MSLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF 403
MS H+ R +++ T+ SM L + + +G++KPSPIQ + + G
Sbjct: 1 MSEVHEDRQFQSNVPLEVYP--TWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGK 58
Query: 404 DLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGL 580
+++ ++++G+GKT FSI L +L L + +++I++PTRE+ + +K +G+
Sbjct: 59 NIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLGA----- 113
Query: 581 NVEXVMGGLSVNEXIXKFXKKVH 649
N +GG S+ + K +H
Sbjct: 114 NTRACVGGNSLGADVKALQKGIH 136
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
+E + F + +S + GF++ SPIQ +P D+ +A++GTGKT F I
Sbjct: 1 MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI 60
Query: 458 IALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
LE ++ +N LQ +IL PTRE+ + + ++++ + ++V V GG ++ I
Sbjct: 61 PLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKAL 120
Query: 635 XKKV 646
K V
Sbjct: 121 QKGV 124
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
V +F + LSE + G+++P+P+Q+ + G D+++ +K+GTGKT F+I
Sbjct: 17 VSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAI 76
Query: 458 IALEKL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
LE++ + +++ PTRE+ + + + H+ L+V V GG S+ E + K
Sbjct: 77 PILERIADGRRRPSALVMCPTRELAIQVAQEFTAL-AKHRDLSVVAVYGGASMGEQLQK 134
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTR 520
G+++P+ IQ+ +P+ G D++ A++G+GKT F+I L+K L L +IL PTR
Sbjct: 60 GWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTR 119
Query: 521 EIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
E+ I + + +GS GL+V ++GGL + + KK H
Sbjct: 120 ELSLQIKEQLISLGS-EIGLDVCLILGGLDMVSQALQLSKKPH 161
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 64.1 bits (149), Expect = 3e-09
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +2
Query: 263 RDVQIVE-NVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
+D+QI NV+ F + L E L + +GF+ P+ +Q + G L+ +AK+GTG
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTG 122
Query: 437 KTVVFSIIALEKLNL-NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
KT VF + L +N +N ++ +++T TRE+ D ++G K + VE GG
Sbjct: 123 KTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGG 179
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + + L + G++ P+ IQ +P G D++ A++GTGKT F+I L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 470 KLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
K+++ + + Q ++L PTRE+ + + + G++ LNV + GG S
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 275 IVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 454
+ + +TF + L EF L + GF+ PSPIQ +P G D+L A++G+GKT F+
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA 60
Query: 455 IIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
+ L +++ Q++++ PTRE+ + D + + +G + + GG
Sbjct: 61 LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGG 111
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
+I +N F M L E L G+ + GF+KPS IQ + G+D++ +A+SGTGKT F
Sbjct: 32 EITDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATF 89
Query: 452 SIIALEKLNLN-NGLQVMILTPTREI 526
+I L++L ++ Q ++L PTRE+
Sbjct: 90 AISILQQLEIDQKETQALVLAPTREL 115
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT M + L L GF+KP+ IQ +P G D++ +A++GTGKT F+I L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 473 LNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
L+ + N +Q +++ PTRE+ I D + +G + + ++GG+S
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KIALILGGVS 108
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALE 469
F S LS +A + GF P+PIQ +P+ G D + A +GTGKT F I +E
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
++ Q ++L+PTRE+ + + + +G KG+ V + GG S I +
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGK-KKGVRVVTIYGGASYRTQIDGIKRGA 164
Query: 647 H 649
H
Sbjct: 165 H 165
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/107 (31%), Positives = 59/107 (55%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + + + L L GF+K PIQ +P+ G D++ +A +GTGKT +SI L++
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+ G+Q +I+ PTRE+ I + +K+ + K + + GG S+
Sbjct: 64 IKEGGGIQGLIVAPTRELAVQITEEVKKFAKYTK-VRPVAIYGGQSM 109
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/111 (28%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM L++ TL G++ G++ P+PIQ +P G D++ A++G+GKT + + + +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 473 LNLNN--GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L ++ G++ +I+ PTRE+ V ++G L ++GG +++
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGK-LTNLKASLIIGGSKLSD 124
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 63.3 bits (147), Expect = 5e-09
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF---SI 457
++F+++ LSE LA + ++G+ P+PIQ +P D+L A++GTGKT F +
Sbjct: 1 MSFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPML 60
Query: 458 IALEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
LEK + + +IL PTRE+ A + + + G+ K LNV ++GG+S + K
Sbjct: 61 TILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQK-LNVALLIGGVSFGDQDAKL 119
Query: 635 XKKV 646
+ V
Sbjct: 120 TRGV 123
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/107 (28%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ + L++ + +I G++ P+PIQ + +P G D+L +A++GTGKT F++ +
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 473 LNL---NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
++L + QV++L PTRE+ + + + + L+V + GG
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F S+ LSE + + S G+++ + IQ +P G DL+ +AK+GTGKT F + L K
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 473 LNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
L L++ +QV+IL PTRE+ + I+ + + + + GG+
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGM 111
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/122 (26%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S +AG+ + G+++P+PIQ +P G D++ A++GTGKT +++ +
Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60
Query: 467 EK-LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
+K L+ G ++ +++ PTRE+ I D + +G + + + GG+++++ I +
Sbjct: 61 QKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRAR-IRECSIYGGVNMDQQIRRLRS 119
Query: 641 KV 646
V
Sbjct: 120 GV 121
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 63.3 bits (147), Expect = 5e-09
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S+ LS L + G+++P+PIQ +P G DL+ A++GTGKT F++ L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 467 EKL-------NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEX--VMGGLSVNE 619
+ L ++ +ILTPTRE+ A I + ++ + K LN+ V GG+S+N
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVR---DYSKYLNIRSLVVFGGVSINP 117
Query: 620 XIXK 631
+ K
Sbjct: 118 QMMK 121
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Frame = +2
Query: 254 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 433
T+ + ++ + S+ LSE L +G+ K + IQ +PL G D++ +A++G+
Sbjct: 70 TKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGS 129
Query: 434 GKTVVFSIIALEKLN-----LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVM 598
GKT+ F I +E LN NG +I++PTRE+ DV+++I +H + ++
Sbjct: 130 GKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHSERTRT-LII 188
Query: 599 GGLS 610
GG S
Sbjct: 189 GGSS 192
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ + LS+ L L +GF KP+PIQ +PL D++ +A++G+GK+ F + LE
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 473 LNLNN-----GLQVMILTPTREIXAXICDVIKQIGSH-HKGLNVEXVMGGLSVNEXIXKF 634
L+ ++ ++V++LTPTRE+ I + G+ K V V+GG + E +
Sbjct: 63 LSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLFNI 122
Query: 635 XK 640
K
Sbjct: 123 QK 124
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 62.9 bits (146), Expect = 6e-09
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +2
Query: 338 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTP 514
+SGFQKP+P+Q L G D++ E+ +GTGKT+ +++ LE++ Q +IL P
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 515 TREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+RE+ I VI+ + + L ++GG +V + + K K H
Sbjct: 81 SRELVMQIFQVIQDWKAGSE-LRAASLIGGANVKKQVEKLKKHPH 124
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 62.9 bits (146), Expect = 6e-09
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+S+ L L L GF +P+PIQ +P G D++ A +G+GKT F + L +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 473 L--NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
L + +++TPTRE+ A I + + + + H ++ V GG+S+ F + V
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDL-AVHTPISAAAVFGGVSIRPQEHAFRRGV 121
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 62.9 bits (146), Expect = 6e-09
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
+ ++F + L L + + G++ PSPIQ +P G LL A++GTGKT F++
Sbjct: 21 MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFAL 80
Query: 458 IALEKLNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L +++ N Q+++L PTRE+ + + S + +V + GG
Sbjct: 81 PLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGG 130
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 62.9 bits (146), Expect = 6e-09
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +2
Query: 323 LAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQ 496
L ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 176 LQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFR 235
Query: 497 VMILTPTREIXAXI 538
+I++PTRE+ + I
Sbjct: 236 ALIISPTRELASQI 249
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 62.9 bits (146), Expect = 6e-09
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF+ + L E L L GF +P+ IQ +P G D+L A +GTGKT + + AL+
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 470 KL-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
L + +++ILTPTRE+ + D +++ + H L++ + GG++
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHAREL-AKHTHLDIATITGGVA 115
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 62.9 bits (146), Expect = 6e-09
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM L E G+ G++ P+PIQ +PL G D+ A++G+GKT F + +++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 473 LNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
L ++ G++ +IL+PTR++ +Q+G L + ++GG S+
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGK-FTDLKISLIVGGDSM 159
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 62.9 bits (146), Expect = 6e-09
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +2
Query: 323 LAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQ 496
L ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 177 LQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFR 236
Query: 497 VMILTPTREIXAXI 538
+I++PTRE+ + I
Sbjct: 237 ALIISPTRELASQI 250
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM L++ L + GF+ P+PIQ +PL G D++ A++G+GKT F I +E
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 473 LN---LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L N+ + +IL+P RE+ V+K S L ++GG+S+ E
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDF-SKGTDLRSVAIVGGVSLEE 181
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 62.5 bits (145), Expect = 8e-09
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F S+ L + G++ P+PIQ +PL G D++ A++G+GKT F I LEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 473 LNLN---NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
L + G++ +IL+PTR++ K++G L V ++GG S+ + + K
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGK-FTDLRVSLLVGGDSMEDQFEELTK 147
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +2
Query: 347 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTRE 523
F+K P+Q +PL + D+L+EA +GTGKT+ + I ALE ++ N +QV+I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 524 IXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
+ I VI Q+ S G+ +GG+ + + KK
Sbjct: 77 LVMQIHQVI-QLFSQGSGIKSGAFIGGVELKRQHERLKKK 115
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 266 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 445
D V + +F + L + L+ L G+++ + IQ +P DL+ +AK+G+GKT
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAEKDLIAKAKTGSGKTA 88
Query: 446 VFSIIALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEX 622
F I L KL N Q ++L PTRE+ + + ++++ + L + + GG +
Sbjct: 89 AFGIGLLLKLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPIGPQ 148
Query: 623 IXKFXKKVH 649
I H
Sbjct: 149 IGSLEHGAH 157
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT L E + L + +P+PIQ +PL G D++ ++K+G+GKT F+I E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 473 LNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
+ L Q ++L PTRE+ + D I +G K + V V GG ++ +K H
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVG-RMKRVKVPVVFGGFPFDKQALTLKQKSH 124
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 62.1 bits (144), Expect = 1e-08
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM L + G+ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 473 LNL---NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
L G + +IL+PTRE+ IK++G + L V+GG S++
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFME-LKSILVLGGDSMD 150
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + L+ + +A GF+ PS IQ + +P G D++ AK+G+GKT F+I L
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
+L+ + G+ +ILTPTRE+ I + IG+ +N V+GG+
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGA-PMNVNCSVVIGGI 110
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 463
+F+ + L + + GL++ F+KPS IQ +P L +++ +++SGTGKT F +
Sbjct: 97 SFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTI 156
Query: 464 LEKLNLN--NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L +++ N N Q + L P+RE+ I VI+ IG GL V+ + G
Sbjct: 157 LSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPG 205
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 61.7 bits (143), Expect = 1e-08
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF +M LS L + S F P+PIQ +P+ G D+ A +GTGKT + + LE
Sbjct: 155 TFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLE 214
Query: 470 KL---NLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+L L+ + +V++L PTRE+ + V KQ+ S + V +GGL V
Sbjct: 215 RLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQL-SQFTSVEVGLSVGGLDV 265
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 61.7 bits (143), Expect = 1e-08
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Frame = +2
Query: 242 IRNSTRTRDV-QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
+ NS + D Q E++TF M LS L + + F +P+PIQ +P+G G D+
Sbjct: 165 VGNSGFSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICAC 224
Query: 419 AKSGTGKTVVFSIIALEKLNLNNG----LQVMILTPTREIXAXICDVIKQIGSHHKGLNV 586
A +GTGKT F + LE+L +V++L PTRE+ + V +Q+ + +
Sbjct: 225 AATGTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTE-VTT 283
Query: 587 EXVMGGLSV 613
+GGL V
Sbjct: 284 CLAVGGLDV 292
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 61.7 bits (143), Expect = 1e-08
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 463
TF + +S + G++ P P+Q +P LG+ D++ A++GTGKT F +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENN-DVVALAQTGTGKTAAFGLPL 61
Query: 464 LEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
L+++++ N + Q +IL PTRE+ I + + GL V V GG S++ I +
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 641 KVH 649
VH
Sbjct: 122 GVH 124
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S+ LS+F + L S G+++P+ IQ +P G DL+ A++G+GKT F + L
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 467 EKLNL-----NNGLQVMILTPTREIXAXICDVIKQIGSH-HKGLNVEXVMGGLSVNEXIX 628
EKL+ NN ++L PTRE+ + + + + + + + GG ++N +
Sbjct: 61 EKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQ 120
Query: 629 KFXK 640
K
Sbjct: 121 SLSK 124
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F SM L++ L ++ GF P+PIQ +P+ G D++ A++G+GKT F I ++K
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 473 LNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L ++ G++ +IL+PTRE+ V+K S L ++GG S+ +
Sbjct: 292 LGDHSTTVGVRAVILSPTRELAIQTFKVVKDF-SQGTQLRTILIVGGDSMED 342
>UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 782
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT + LS TL GL S + + IQ + L G D+L AK+G+GKT+ F I +E
Sbjct: 43 FTDLPLSMQTLKGLKDSEYIDLTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVMEI 102
Query: 473 LNLN-----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L +GL +I+TPTRE+ I + ++++G +H ++ ++GG
Sbjct: 103 LYCKQWTRLDGLGALIITPTRELAYQIYETLRKVGRYH-DISAGLIIGG 150
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/118 (27%), Positives = 60/118 (50%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F S L + GL G++ + +Q VP+ + G D++ +A++G+GKT F + LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
+ LQ ++L PTRE+ + + + + GL++ V GG + + K V
Sbjct: 67 CQPSGKLQALVLAPTRELANQVAQEFELL-QGNAGLSIVTVYGGTDLEKQAKTLAKGV 123
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIA 463
+TF + L+ L + GF+ PS IQ +P L D++ A++GTGKT F
Sbjct: 1 MTFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPL 60
Query: 464 LEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L+ ++ ++ Q +I+ PTRE+ I + +K H KG+ V V GG ++ E
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQE 113
>UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=3;
Cryptosporidium|Rep: CG6539/Dhh1-like SF II RNA helicase
- Cryptosporidium parvum Iowa II
Length = 581
Score = 61.3 bits (142), Expect = 2e-08
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Frame = +2
Query: 233 AHDIRNSTRTRDVQ--IVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 406
+ D++ + D++ + N+ F+ L + L S+GF PSP+Q H + G +
Sbjct: 3 SQDLKKNELPDDIRLKVSHNIRFSDFPLHRCLIDALFSNGFIFPSPVQYHILSQGAIEEN 62
Query: 407 LLLEAKSGTGKTVVFSIIALEKL--NLNN---------GLQVMILTPTREIXAXICDVIK 553
LL++AKSGTGKT+ F + L KL +L+N L+ + + PTREI I I
Sbjct: 63 LLVQAKSGTGKTIAFVLFILNKLLDSLDNCLERSSLCFELKSLFIAPTREICIQINKTIS 122
Query: 554 QIGSHHKGL-NVEXV--MGGLSVNEXIXKF 634
+ K + +++ V +GG + E KF
Sbjct: 123 MFLNSIKDIYSIDSVCCIGGSPIFEDFGKF 152
>UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 32; n=1; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 32 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 739
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + +S+ T GL + + + +Q +P CG D+L A++G+GKT+ F I LEK
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 473 LNL-----NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L+ +G+ +I++PTRE+ A V+ ++G HK + ++GG
Sbjct: 133 LHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHK-FSAGLLIGG 180
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Frame = +2
Query: 269 VQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 448
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 449 FSIIALEKL-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
F + LE L +GL V+I++PTRE+ +V++++G +H + ++GG
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGG 178
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Frame = +2
Query: 269 VQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 448
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 449 FSIIALEKL-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
F + LE L +GL V+I++PTRE+ +V++++G +H + ++GG
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGG 178
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F S+ L L + G+++PSPIQ +P G D+L A++GTGKT F++ L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 473 L-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
N QV++L PTRE+ + ++ H + V + GG
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGG 112
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ + L + G+ + G+ P+P+QL +P+ G DL+ A++GTGKT F++ L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 473 L--NLNNGLQVMILTPTREIXAXICDVIKQIG 562
L + G +V++L PTRE+ A + + G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFG 94
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 60.9 bits (141), Expect = 3e-08
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS +AGL + P+PIQ +P G G D+L A++GTGKT F + L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 473 LNLNNGLQV-------MILTPTREIXAXICDVIKQI--GSHHKGLNVEXVMGGLSVNEXI 625
L + G + +IL PTRE+ + IC+ ++ GSH L ++ ++GG+++ I
Sbjct: 133 L-MKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSH---LKLQVIVGGVAIGPQI 188
Query: 626 XK 631
+
Sbjct: 189 KR 190
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 469
F LS TL GL + + KP+ IQ + G D++ AK+G+GKT+ I LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 470 ----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
K + + GL +I++PTRE+ I +G+HH G + V+GG V
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHH-GFSCGLVIGGSDV 188
>UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 546
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 299 SMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN 478
S +LSE T+ L GF +P+Q P D+ +EA +G+GKT+ + + ++E +
Sbjct: 14 SEVLSEETINVLTKIGFPSMTPVQKSVTPYLLGHKDVAVEAVTGSGKTLAYLVPSMEYIK 73
Query: 479 LN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
+ +GL V++L PTRE+ + +V + I + + + V+GG V I F
Sbjct: 74 KSTDGLAVLVLVPTRELAQQVYEVAQSISAEFPAMVPQYVIGGSQVTADIETF 126
>UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 32 - Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 60.9 bits (141), Expect = 3e-08
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS T GL +G+ + S IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEK 141
Query: 473 L-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMG 601
L +G+ ++L+P +++ I +V +++G H G + ++G
Sbjct: 142 LYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLH-GFSAACIVG 188
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 60.9 bits (141), Expect = 3e-08
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IA 463
+ F L E L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + +
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262
Query: 464 LEKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
+ L + +ILTPTRE+ I K++ S + ++GGL + + + +
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH 322
Query: 644 V 646
V
Sbjct: 323 V 323
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 60.9 bits (141), Expect = 3e-08
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 457
+F M + L GL + G + P+PIQ+ G+P G DL+ A +G+GKT+VF +
Sbjct: 178 SFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIM 237
Query: 458 IALEK-----LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXV-----MGGL 607
ALE+ N G +I+ P+RE+ ++I+ H + + + MGGL
Sbjct: 238 FALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGL 297
Query: 608 SVNEXIXKFXKKVH 649
V+E + + VH
Sbjct: 298 PVSEALDVISRGVH 311
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 60.5 bits (140), Expect = 3e-08
Identities = 34/114 (29%), Positives = 61/114 (53%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
++ ++F+S+ LS + L +PS IQ +P G D+ A +G+GKT+ + +
Sbjct: 20 IQPMSFSSLALSADLIQAL-PKAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGL 78
Query: 458 IALEKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
LE+L + Q ++L PTRE+ + +V+ +G+ GLN + GG+ E
Sbjct: 79 PLLERLKTSPEQQALVLVPTRELAMQVSEVLTHVGT-ALGLNTLCLCGGVDKTE 131
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+++ + + +A L +G P IQ+ +P G D+L A +G+GKT+ F + L +
Sbjct: 231 FSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSR 290
Query: 473 LNL----NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
L+ +N + +IL+PTRE+ I D + + S GL+ + GG+S F +
Sbjct: 291 LSATPREDNRPRALILSPTRELAMQIADALSSLAS-SMGLSTILIAGGMSYGPQTKAFKR 349
Query: 641 KV 646
V
Sbjct: 350 GV 351
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 60.5 bits (140), Expect = 3e-08
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S+ LSE + + ++G+ +P+P+Q +P G DL++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 467 EKL--------NLNNG---LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
E+L + +G +V++LTPTRE+ A + D K + + + GG+ +
Sbjct: 61 ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK-VYARDLNFISACIFGGVGM 119
Query: 614 NEXIXKFXKKV 646
N + K V
Sbjct: 120 NPQVQAMAKGV 130
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 60.5 bits (140), Expect = 3e-08
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +2
Query: 266 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 445
D + + VTF S+ L E LA + GF+ P+PIQ +P D++ A++GTGKT
Sbjct: 38 DEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTA 97
Query: 446 VFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
F + L ++ + +Q ++L PTRE+ I+ + L+V V GG
Sbjct: 98 AFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGG 151
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 457
TF SM L L L GFQ PS +Q +PL G D+L +A++G+GKT +SI
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83
Query: 458 ---IALEKLNLNNGLQVMILTPTREIXAXICDVIKQI 559
+A EK N+ G++ ++L PTRE+ + + Q+
Sbjct: 84 KVLMAKEKSNI-KGVKAVVLVPTRELCEQVKNHFNQV 119
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 60.5 bits (140), Expect = 3e-08
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 469
F + LS+ TL + GF + +Q +P G D+L AK+G+GKT+ F I A+E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 470 ----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFX 637
K NG ++++TPTRE+ I V +++ H V+GG + + K
Sbjct: 104 LHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFH-SQTFGIVIGGANRRQEAEKLM 162
Query: 638 KKVH 649
K V+
Sbjct: 163 KGVN 166
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 60.5 bits (140), Expect = 3e-08
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Frame = +2
Query: 281 ENVTFTSM--LLSEFTLAGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 451
E+ +F S+ L++E TL + GF + IQ + PL + G DLL AK+G+GKT+ F
Sbjct: 175 EDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAF 233
Query: 452 SIIALE---KLNL--NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
I A+E KL NG V+IL+PTRE+ V+K++ +HH +MGG
Sbjct: 234 LIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVH-TYGLIMGG 288
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 60.5 bits (140), Expect = 3e-08
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + + + GL +GF +Q +P+ G D++ +++GTGKT+ F + L++
Sbjct: 6 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQR 65
Query: 473 L-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
L +GL +++TPTRE+ I DV+ +I + + L+ +MGGL + + K
Sbjct: 66 LVSLGWGGGDGLGCLVITPTRELALQIFDVLSRI-AKYTVLSTGLIMGGLEAEDELLK 122
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 275 IVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 454
+V+N F M L E L G+ + GF+KPS IQ + G D++ +A+SGTGKT F
Sbjct: 28 VVDN--FDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFV 85
Query: 455 IIALEKLNLN-NGLQVMILTPTREI 526
I L++++ + Q +IL PTRE+
Sbjct: 86 ISILQRIDTSLKETQALILAPTREL 110
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 60.1 bits (139), Expect = 5e-08
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Frame = +2
Query: 281 ENVTFTSM--LLSEFTLAGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 451
E+ +F S+ L+SE TL G+ GF+ + IQ + PL + G D+L AK+G+GKT+ F
Sbjct: 57 EDTSFASLAELVSENTLKGVKELGFEHMTEIQHKTIRPLLE-GRDVLAAAKTGSGKTLAF 115
Query: 452 SIIALE-----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
I +E K NG V+IL+PTRE+ V+K++ +HH +MGG
Sbjct: 116 LIPCIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVH-TYGLIMGG 170
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 60.1 bits (139), Expect = 5e-08
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF + L L + + KP+PIQ +P D+L A +GTGKT F + AL
Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60
Query: 467 EKL----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
+ L + +V+IL PTRE+ I V+KQ+G+H V GG + ++ +
Sbjct: 61 QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCP-FESNVVTGGFASDKQLEIL 119
Query: 635 XKKV 646
K+
Sbjct: 120 QSKI 123
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 60.1 bits (139), Expect = 5e-08
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALE 469
F LSE L + G++KP+ IQ +P DL+ +A++GTGKT F I LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 470 KLNL--NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
+++ N ++ +I+TPTRE+ I + +K + K + + + GG S+ + K
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSL-KGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 644 V 646
V
Sbjct: 139 V 139
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
Q+ E V + + LS + + G+ + +P+Q +P D++ +A +GTGKT F
Sbjct: 7 QVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAF 66
Query: 452 SIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIX 628
I +E ++ ++ +Q ++L PTRE+ I D ++ + +G+ + GG + + I
Sbjct: 67 GIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQIT 126
Query: 629 KFXK 640
K
Sbjct: 127 TLKK 130
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 60.1 bits (139), Expect = 5e-08
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S AG+ G+ P+PIQ +P G D++ A++GTGKT F + L
Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60
Query: 467 EKL--NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
++L ++ MI+TPTRE+ I VI+ +G + GL + GG+ I + +
Sbjct: 61 QRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGK-YTGLRSVTLYGGVGYQGQIQRLRR 119
Query: 641 KV 646
V
Sbjct: 120 GV 121
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 60.1 bits (139), Expect = 5e-08
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Frame = +2
Query: 230 LAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDL 409
++ DIR+ +T I+ N F+S+ L ++ L + G++ P+PIQ +P G DL
Sbjct: 14 VSDDIRSERKTT---IMSN-PFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDL 69
Query: 410 LLEAKSGTGKTVVFSIIALEKLN---------LNNGLQVMILTPTREIXAXI 538
L A++GTGKT F + +LE+L + +++++LTPTRE+ I
Sbjct: 70 LAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQI 121
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 60.1 bits (139), Expect = 5e-08
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Frame = +2
Query: 239 DIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
DI S E FT + +S+ T GL + +P+Q + L G D+L
Sbjct: 53 DIAESNEANTSTEHEYSKFTELPISQRTQMGLERGHYTILTPVQKGTLHLALAGLDVLGA 112
Query: 419 AKSGTGKTVVFSIIALEKL-----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLN 583
AK+G+GKT+ F I LE+L + + G+ ++L+PTRE+ I V++ +G H L+
Sbjct: 113 AKTGSGKTLCFVIPVLERLYRERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHV-LS 171
Query: 584 VEXVMGGLSVNE 619
+ GG V E
Sbjct: 172 AALLTGGRDVQE 183
>UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|Rep:
DEAD-box helicase 18 - Plasmodium falciparum
Length = 946
Score = 60.1 bits (139), Expect = 5e-08
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Frame = +2
Query: 245 RNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 424
+N+ D ++ + F ++ +S+ TL L + F + IQ +P+ + +A+
Sbjct: 109 KNNLTIIDKNVLTSAEFKTLPISKRTLRALNENNFIYMTNIQYVSLPIVLLNKHIYAQAQ 168
Query: 425 SGTGKTVVFSIIALEKL------NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNV 586
+GTGKT+ F I +EK+ N N L +I+TPTRE+ I +V+ + +HK LN+
Sbjct: 169 TGTGKTLCFCIPLIEKMYRNSIDNYNKILGGIIITPTRELVFQIFEVLNMLNKYHK-LNI 227
Query: 587 EXVMGG 604
+GG
Sbjct: 228 CCAIGG 233
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 60.1 bits (139), Expect = 5e-08
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +2
Query: 236 HDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLL 415
HD V+ E TF + +++ G+ KP+ IQ+ +PL G D++
Sbjct: 7 HDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIG 66
Query: 416 EAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEX 592
A++G+GKT F++ L L L ++LTPTRE+ I + + +GS G+
Sbjct: 67 LAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAV 125
Query: 593 VMGGLSVNEXIXKFXKKVH 649
++GG+ KK H
Sbjct: 126 IVGGIDSMSQSLALAKKPH 144
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 60.1 bits (139), Expect = 5e-08
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 463
+F + L E + G+I++GFQKPS IQ +P L +L+ +++SGTGKT F++
Sbjct: 149 SFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNM 208
Query: 464 LEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
L +++ Q + + P+RE+ I +VI QIG + + G S N I K
Sbjct: 209 LSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSWSRNSRIDK 265
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 59.7 bits (138), Expect = 6e-08
Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S+ L + L L +Q P+P+Q +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 60
Query: 467 EKL------NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVE--XVMGGLSVNEX 622
++L +N +V++L PTRE+ V++ ++ KGL++ GG+S+N
Sbjct: 61 QRLVQHGPAVSSNRARVLVLVPTRELAE---QVLQSFIAYGKGLDLRFLAAYGGVSINPQ 117
Query: 623 IXKFXKKV 646
+ K K V
Sbjct: 118 MMKLRKGV 125
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 59.7 bits (138), Expect = 6e-08
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ + LS + L + F +P+PIQ + G D++ A++GTGKT+ F + ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 473 LNL---NNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
L+ G++ +ILTPTRE+ I + + QI + G+ +GGL+
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQI-ARGTGIRAAVAVGGLN 111
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +2
Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 517
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 518 REIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
RE+ V+K++G GL ++GG + E
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEE 135
>UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4;
Sulfolobaceae|Rep: ATP-dependent RNA helicase -
Sulfolobus solfataricus
Length = 360
Score = 59.7 bits (138), Expect = 6e-08
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +2
Query: 308 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 487
LSE L +G+ KP+ +Q +P G ++++AK+G+GKT + I LE+
Sbjct: 22 LSEDLRKALNEAGYIKPTRVQEVVIPELMNGKSVIVQAKTGSGKTAAYVIPILER----- 76
Query: 488 GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
+IL+PTRE+ I D IK++G +K ++V ++GG+S ++
Sbjct: 77 NSTALILSPTRELATQILDEIKKLGK-YKQIDVSLIIGGMSYDD 119
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
+V+F ++ L + L G+ KP+PIQ +P G DL A++GTGKT F++ +
Sbjct: 5 SVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPS 64
Query: 464 LEKLNLN------NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
+ L N G +++IL+PTRE+ + I + H ++V V GG+ +
Sbjct: 65 IHYLATNPQARPQRGCRMLILSPTRELASQIARACNDY-TRHLRMSVNAVFGGVPI 119
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 59.3 bits (137), Expect = 8e-08
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Frame = +2
Query: 314 EFTLAGLISS-GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----- 475
+FT+ IS GF+ P+ IQ +P+ G DLL A +GTGKT+ F A++ +
Sbjct: 25 DFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQHILDRDE 84
Query: 476 NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
+V+IL P+RE+ I +V++Q+ H + + ++GG
Sbjct: 85 QSTTAPKVLILAPSRELARQIFNVVEQLTKHTR-IQSHLIIGG 126
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 59.3 bits (137), Expect = 8e-08
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
R+RD V FT++ L+E L + ++ P+PIQ +P+ G DL+ A++GTG
Sbjct: 48 RSRDESAVLT-DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTG 106
Query: 437 KTVVFSIIALEKLNLN------NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVM 598
KT F + L ++ N + ++L PTRE+ I D + G + +V V+
Sbjct: 107 KTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRP-SVAVVI 165
Query: 599 GG 604
GG
Sbjct: 166 GG 167
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 59.3 bits (137), Expect = 8e-08
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
E++TF + L+ L L S G++ P+PIQ + G D+L A++GTGKT FS+
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 461 ALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
L +++ N Q ++L PTRE+ + + + +V + GG + +
Sbjct: 63 LLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQL 118
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 59.3 bits (137), Expect = 8e-08
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Frame = +2
Query: 302 MLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 481
M LSE L + + P+PIQ +P G DL+ A++GTGKT F++ L +L+L
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 482 NNGL------QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
+ QV++L+PTRE+ I G + K + + GG+ N + +
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVK-FRLTTIFGGVGQNPQVRALKRG 119
Query: 644 VH 649
VH
Sbjct: 120 VH 121
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 59.3 bits (137), Expect = 8e-08
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 323 LAGLISSGFQKPSPIQLHG-VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQ 496
L ++ G +KPS IQ G VP K G D++ +A+SGTGKT F L++LN Q
Sbjct: 24 LLNVLCEGIEKPSAIQQKGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQ 82
Query: 497 VMILTPTREIXAXICDVIKQIGSH 568
++L PTRE+ I V++ +G H
Sbjct: 83 ALVLAPTRELAQQIEKVMRALGDH 106
>UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-PA
- Drosophila melanogaster (Fruit fly)
Length = 826
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Frame = +2
Query: 254 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 433
T+ ++ F LS+ T L S F P+ +Q + G D+L A +G+
Sbjct: 61 TKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGS 120
Query: 434 GKTVVFSIIALEKLNLN-----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVM 598
GKT+ F I LE L +N +G+ +I++PTRE+ I + +K++G HH + ++
Sbjct: 121 GKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHH-DFSAGLII 179
Query: 599 GG 604
GG
Sbjct: 180 GG 181
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 59.3 bits (137), Expect = 8e-08
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Frame = +2
Query: 269 VQIVENVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 445
V+ E +T F M LS + + G+ P+PIQ +P+ G D+ A +GTGKT
Sbjct: 150 VEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTA 209
Query: 446 VFSIIALEKL---NLNNG--LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
+ + LE+L LNN +V++L PTRE+ A + V KQ+ ++V +GGL
Sbjct: 210 AYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQL-CQFTTIDVGLAIGGLD 268
Query: 611 V 613
V
Sbjct: 269 V 269
>UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 156
Score = 59.3 bits (137), Expect = 8e-08
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Frame = +2
Query: 272 QIVENV----TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 439
++VEN TFTS+ + E L F+K PIQ +PL G D++ AK+G+GK
Sbjct: 7 EVVENENHDDTFTSLKVCEGAKGVLTKLPFEKMFPIQKKAIPLLLEGADVVGAAKTGSGK 66
Query: 440 TVVFSIIAL-----EKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
T+ F I A+ + ++ + G+ V+IL PT E+ + I DV+ + ++V GG
Sbjct: 67 TLAFVIPAINLLISKNISKSEGIAVLILVPTHELASQIFDVVSSL-ILDLDISVGLFCGG 125
Query: 605 LSVNEXIXKF 634
++ I ++
Sbjct: 126 SNIKTDIEQY 135
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
N+ F+S+ L L GL +GF +PIQ +P+ G D+ +A++GTGKT+ F ++
Sbjct: 8 NLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVV 67
Query: 464 LEKLNLNNGL--------QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
+ +L GL + +IL PTRE+ I + + G + GL + GG+ ++
Sbjct: 68 VNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGG-NLGLRFALIYGGVDYDK 126
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LS + + G ++P+P+QL +P G D L AK+G+GKT F + L+K
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 473 LNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
L+ + G+ ++LTPTRE+ I + + +G GL ++GG+ + + +K H
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGK-PLGLKDCIIVGGMDMVAQALELSRKPH 122
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 59.3 bits (137), Expect = 8e-08
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F +M L+ L + GF+ P+PIQ VPL G D++ A++G+GKT F I +E+
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 473 LNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L ++ G + +I++P+RE+ V+K+ G L ++GG S+ E
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFG-RGTDLRTILLVGGDSLEE 190
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 58.8 bits (136), Expect = 1e-07
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
FT + L L +G++ P+PIQL +P+ G DLL A++GTGKT FS+ L+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 473 LNLN------NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
L+ + + +ILTPTRE+ I + I+ S H + + GG+ N +
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAY-SKHLNMKHAVIFGGVGQNPQV 121
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = +2
Query: 332 LISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMI 505
++S GF+KPSPIQ G+ P+ K G D + +A+SGTGKT FSI L+ ++ ++ Q +I
Sbjct: 49 VLSYGFEKPSPIQQCGIIPIIK-GKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALI 107
Query: 506 LTPTREI 526
L PTRE+
Sbjct: 108 LAPTREL 114
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Frame = +2
Query: 263 RDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 442
RDV+ VE+ F +L+ A + G++KP+P+Q +G+P+ G DL+ A++G+GKT
Sbjct: 466 RDVKPVED--FADLLVEPALAANIERCGYKKPTPVQRYGIPVALSGSDLMACAQTGSGKT 523
Query: 443 VVFSIIALEKLNLNNGLQ----------VMILTPTREIXAXICDVIKQIGSHHKGLNVEX 592
F +I + + L +G+ ++L PTRE+ I D ++++ + + + +
Sbjct: 524 AAF-LIPVVQYMLVHGVSPARQRKSYPIALVLAPTRELAVQIFDEVRKL-TFNTDIFYDV 581
Query: 593 VMGG 604
V GG
Sbjct: 582 VYGG 585
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +2
Query: 269 VQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 448
V+ E TF + +++ G+ KP+ IQ+ +PL G D++ A++G+GKT
Sbjct: 7 VEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 66
Query: 449 FSIIALEK-LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 625
F++ L L L ++LTPTRE+ I + + +GS G+ ++GG+
Sbjct: 67 FALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAVIVGGIDSMSQS 125
Query: 626 XKFXKKVH 649
KK H
Sbjct: 126 LALAKKPH 133
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 58.8 bits (136), Expect = 1e-07
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = +2
Query: 245 RNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 424
R S + + + F +M L+ L + GF P+PIQ +P+ D++ A+
Sbjct: 77 RKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMAR 136
Query: 425 SGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXV 595
+G+GKT F I +EKL ++ G + +IL+P+RE+ V+K++G KG +++ V
Sbjct: 137 TGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELG---KGTDLKSV 193
Query: 596 M--GGLSVNE 619
+ GG S+ E
Sbjct: 194 LLVGGDSLEE 203
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + E L L + G +P+ IQ +P G +L++ +++GTGKT+ + + L K
Sbjct: 4 FQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPMLTK 63
Query: 473 L-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKK 643
L Q +IL PT+E+ I +V KQ+ + + V ++GG ++ + K KK
Sbjct: 64 TEELPEQTQALILAPTQELAMQIVEVAKQL-TATTSITVLPLIGGANIKRQVEKLKKK 120
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F S + + L G++K +PIQ +P+ + G D+ A++GTGKT FS+ +
Sbjct: 1 MSFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLI 60
Query: 467 EKLNLNNG-------LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
++L L +G + +I PTRE+ I D IK + + L+V + GG
Sbjct: 61 QQL-LESGKSASRKTARALIFAPTRELAEQIADNIKAY-TKYTNLSVAAIFGG 111
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 451
++ + F + L + + + GF+ S IQ +P+ G+D++ +A++GTGKT F
Sbjct: 66 EVEGKMRFHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAF 125
Query: 452 SI--------IALEKLNLNNGLQVMILTPTREIXAXICD-VIKQIGSHHKGLNVEXVMGG 604
I LE+ NN + +I+ PTRE+ I D +K + H LNV ++GG
Sbjct: 126 LIAMISDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNCH--LNVVTLVGG 183
Query: 605 LS 610
LS
Sbjct: 184 LS 185
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +2
Query: 308 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--NL 481
L ++ GL SSGF +PIQ + +P+ G D++ A +G+GKTV F++ AL+K +
Sbjct: 125 LPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMIGLAPTGSGKTVAFAVPALKKFQWSP 184
Query: 482 NNGLQVMILTPTREIXAXICDVIKQIGS 565
N ++++L PTRE+ V Q+ S
Sbjct: 185 NGSPRIVVLAPTRELVQQTAKVFHQLSS 212
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
N FTS+ EF G KP+ +Q V G + ++ +++GTGKT F++
Sbjct: 2 NNPFTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPI 61
Query: 464 LEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEX--VMGGLSVNEXIXKF 634
+ L+ + G+ ++++PTRE+ IC K G +G+N + ++GGL++ +
Sbjct: 62 ISTLSKDPYGIYALVISPTRELAQQICQQFKIFG---RGMNADICPIIGGLAITDQASAL 118
Query: 635 XKKVH 649
K H
Sbjct: 119 EKNPH 123
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
+VTF S+ LS + L S +KP+ IQ V G D + AK+G+GKT+ F++
Sbjct: 151 DVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPI 210
Query: 464 LEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
+E++ + G+ ++LTPTRE+ + + IG GL ++GG+ + + +
Sbjct: 211 VERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGK-PLGLTTATIVGGMDMMKQAQELEA 269
Query: 641 KVH 649
+ H
Sbjct: 270 RPH 272
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F M L L + F P+P+Q +PL G D+L A++GTGKT+ F+I +
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 470 K-LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
K L N +++ PTRE+ + + I ++ + L + ++GG
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGG 108
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF + L T+ + SG+ P+PIQ +P G D++ A++GTGKT F + +
Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83
Query: 467 EKLNLNN-----GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXK 631
E L + + ++LTPTRE+ A + + + + + L + V GG+S+ + +
Sbjct: 84 ELLRAEDKPKRYQVHSLVLTPTRELAAQV-EASAKAYTKYLALRSDAVFGGVSIRPQVKR 142
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
+TF + L L S GF KP+PIQ +P+ DL+ A++GTGKT + + L
Sbjct: 1 MTFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPIL 60
Query: 467 EKLNLNN--GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
K+ +N L ++L PTRE+ I I+ S+ ++ V GG
Sbjct: 61 HKIIESNTDSLDTLVLVPTRELAIQIDQQIEGF-SYFINVSSIAVYGG 107
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +2
Query: 281 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 460
++ F+ + L++ + G+ +P+PIQ VP G D+ A++GTGKT F++
Sbjct: 131 QDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALP 190
Query: 461 ALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
L KL + L+ ++L PTRE+ + + ++ S + L V GG+
Sbjct: 191 ILHKLGAHERRLRCLVLEPTRELALQVEEAFQKY-SKYTDLTATVVYGGV 239
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 508
L S G + SPIQ +P G D++ +A++G+GKT+ F I ALEK+ +N+ Q ++L
Sbjct: 19 LDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIML 78
Query: 509 TPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
PTRE+ + + + V + GG + I H
Sbjct: 79 CPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSPH 125
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
NV+F M LS L +G+ P+PIQ +P+ G D+ A +GTGKT F +
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 464 LEKLNLN----NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
LE++ + +V++L PTRE+ + V +++ + + L V GGL +
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDL 259
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Frame = +2
Query: 245 RNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 424
R++ T D V F+S+ L + L GL GFQ+ +P+Q +P D++ AK
Sbjct: 7 RDTRITTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAK 66
Query: 425 SGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGL--NVEXV 595
+GTGKT F I L+ +N + +Q ++L TRE+ V K + + + +
Sbjct: 67 NGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCA 126
Query: 596 MGGLSVNE 619
+GG+S+ E
Sbjct: 127 IGGVSIAE 134
>UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1;
Toxoplasma gondii|Rep: Dead-box helicase, putative -
Toxoplasma gondii
Length = 822
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
N T L + +LA + GF +P+PIQ +PL G D +L +++G+GKT F +
Sbjct: 24 NAFETLGLSTPTSLAAIKGLGFSQPTPIQRRAIPLLLKGKDCILMSRTGSGKTACFLLPL 83
Query: 464 LEKLNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L+ L ++ G++ +++ PTRE+ A I V ++ H L V ++GG
Sbjct: 84 LDLLGEHSSVVGVRAVLIAPTRELVAQIHRVCSKL-LHSSSLRVCCLLGG 132
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 463
+F + L L G+ S GF+KPS IQ +P L +L+ +++SGTGKT F +
Sbjct: 49 SFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLLTM 108
Query: 464 LEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLS 610
L K+++N+ Q + + PTRE+ I +V + + + + GLS
Sbjct: 109 LSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKGLS 158
>UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX55
homolog; n=7; Endopterygota|Rep: Probable ATP-dependent
RNA helicase DDX55 homolog - Drosophila melanogaster
(Fruit fly)
Length = 613
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Frame = +2
Query: 308 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 487
LS+ L + S GFQ+ +P+Q +PL D+ EA +G+GKT+ F + LE L +
Sbjct: 14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRH 73
Query: 488 --------GLQVMILTPTREIXAXICDVIKQIGSHH--KGLNVEXVMGGLSVNEXIXKFX 637
+ ++++PTRE+ I +V+ Q H + LN + ++GG S+ E I
Sbjct: 74 KETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLR 133
Query: 638 KK 643
++
Sbjct: 134 RE 135
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 215 IAVMSLAHDIRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGK 394
+ + A R +T + ++ F +M L+ L + GF P+PIQ +PL
Sbjct: 66 LIALQQAASFRKTTNLKGKTGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLIL 125
Query: 395 CGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXAXICDVIKQIGS 565
D++ A++G+GKT F I +E+L ++ G + +I++P+RE+ V+K+ G
Sbjct: 126 DRRDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFG- 184
Query: 566 HHKGLNVEXVM--GGLSVNE 619
KG +++ V+ GG S+ +
Sbjct: 185 --KGTDLKTVLLVGGDSLED 202
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F +M L+ L + GF P+PIQ +PL D++ A++G+GKT F I +E+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 473 LNLNN---GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVM--GGLSVNE 619
L ++ G + +I++P+RE+ V+K++G KG +++ V+ GG S+ E
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELG---KGTDLKTVLLVGGDSLEE 198
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F L + L + +GF++PS +Q +P G D+L +AK+GTGKT VF + L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 470 KL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF-XKK 643
+L + ++L TRE+ I + K++G V+ V GG+ + I KK
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGK-FTNFKVKAVYGGVEESVDIHTLKTKK 157
Query: 644 VH 649
H
Sbjct: 158 PH 159
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
TF + L E + L +G P PIQ +P G D+L ++G+GKT+ F + L
Sbjct: 62 TFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLA 121
Query: 470 KL----NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFX 637
L + + +ILTPTRE+ + D ++ G GL ++ V GG S+ I
Sbjct: 122 TLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGD-VLGLKMKVVCGGTSMGNQIYALE 180
Query: 638 KKV 646
+ V
Sbjct: 181 RGV 183
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + + L+ + G+ + +PIQ +P G G D+ A++GTGKTV F I +
Sbjct: 3 FEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIHN 62
Query: 473 LNLNNGLQ---VMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
+ L G+Q ++L PTRE+ I + K++ H +G+ ++GG
Sbjct: 63 I-LTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGG 108
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + LSE L L+ G ++P+ IQ +P G +++ +A++GTGKT+ + + +EK
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 473 L-NLNNGLQVMILTPTREIXAXICDVIKQI-GSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
+ + N +Q +IL+PT E+ I +V+ + K + ++G ++ + K K
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 647 H 649
H
Sbjct: 124 H 124
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 469
F+ L + L+ L ++KP PIQ+ +P CG D+L A++G+GKT+ + + A+
Sbjct: 390 FSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRH 449
Query: 470 -----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
KL N G+ V+I+ PTRE+ + I V G+ + V GG + E +
Sbjct: 450 VLYQPKLRENEGMIVLIIAPTRELASQI-GVESSKLCKLVGIRTKAVYGGSPIGEQLNAL 508
Query: 635 XKKV 646
+ V
Sbjct: 509 KRGV 512
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+FT L L + S + +P+PIQ +P G D++ A++G+GKT F+I L+
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 470 KL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
L ++L PTRE+ I + +GS GL ++GG+S+ E +K
Sbjct: 159 TLYTAAQPYYALVLAPTRELAFQIKETFDALGS-SMGLRSVCIIGGMSMMEQARDLMRKP 217
Query: 647 H 649
H
Sbjct: 218 H 218
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +2
Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKLNLNNGLQVMIL 508
L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + + + L + +IL
Sbjct: 218 LKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRALPEDKTPSALIL 277
Query: 509 TPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
TPTRE+ I K++ + ++GGL + + + + V
Sbjct: 278 TPTRELAIQIERQAKELMRGLPRMKTVLLVGGLPLPPQLYRLQQHV 323
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + L++ + GL G KP+ IQ+ +PL D++ ++ +G+GKT+ + + +
Sbjct: 4 SFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLPIFQ 63
Query: 470 KLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHK-GLNVEXVMGGLSVNEXIXKFXKK 643
K++ + +Q +IL PT E+ I I+ + + K + ++G +V I K +K
Sbjct: 64 KIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKLKEK 123
Query: 644 VH 649
H
Sbjct: 124 PH 125
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 57.2 bits (132), Expect = 3e-07
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +2
Query: 284 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 463
N F + + E T L F +PIQ +P G D++ +A++GTGKT F I
Sbjct: 2 NTLFEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPI 61
Query: 464 LEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXK 640
+EK+ Q +IL PTRE+ + + +K++ ++ + + V GG S +
Sbjct: 62 IEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEA 121
Query: 641 KVH 649
K H
Sbjct: 122 KPH 124
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/125 (23%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +2
Query: 278 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 457
+ +F+S+ L L+ L G+ + +P+Q +P G D+ +AK+G+GKT F I
Sbjct: 1 MSTTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGI 60
Query: 458 IALEKLNLNN-GLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
L+++ +++ Q ++L PTRE+ + ++++ + + + + GG + + +
Sbjct: 61 GLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL 120
Query: 635 XKKVH 649
H
Sbjct: 121 VHAPH 125
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 466
++F + LS+ L + G+++P+P+Q +P DL+ A++GTGKT F + +
Sbjct: 1 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
Query: 467 EKLNLNNGL----QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKF 634
+ L + +IL PTRE+ A + + ++ G +HK L++ ++GG+ + E
Sbjct: 61 DILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHK-LSMSLLIGGVPMAEQQAAL 119
Query: 635 XKKV 646
K V
Sbjct: 120 EKGV 123
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 469
F S L+ L +GF +P+ IQ +P G D+L A++GTGKT F I L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 470 ----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
K + + + +++ PTRE+ I +V K+IG++ + L + GG+
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTR-LRTVCITGGV 111
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,218,220
Number of Sequences: 1657284
Number of extensions: 11088986
Number of successful extensions: 27798
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 26510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27313
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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