Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C03
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 136 2e-32
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 86 3e-17
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 86 3e-17
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 72 5e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 66 2e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 62 3e-10
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 50 2e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 50 2e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 50 2e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 43 2e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 41 0.001
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 41 0.001
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 40 0.002
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 36 0.038
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 33 0.15
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 31 1.1
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 29 4.3
SB_1095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0) 28 5.7
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2) 28 5.7
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 28 5.7
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 28 7.6
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 136 bits (328), Expect = 2e-32
Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
RT DV I E + F S+LLS L GL +GF+KPSPIQL +PLG+CG DL+ +AKSGTG
Sbjct: 3 RTTDVLIEEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTG 62
Query: 437 KTVVFSIIALEK-LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
KT VFS+IALE + +N +Q++ILTPTREI + DVI IG H+ GL + +GG+S+
Sbjct: 63 KTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISL 122
Query: 614 NEXIXKFXKKVH 649
E K K H
Sbjct: 123 EED-KKALKSCH 133
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 85.8 bits (203), Expect = 3e-17
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
N +T DV + F L L G+ GF KPSPIQ +P+ G D+L AK+
Sbjct: 34 NRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKN 93
Query: 428 GTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
GTGKT + + LE+ + N +Q ++L PTRE+ + ++G H G V GG
Sbjct: 94 GTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGK-HMGAQVMVTTGG 152
Query: 605 LSVNEXIXKFXKK 643
S+ + I + K
Sbjct: 153 TSLKDDILRLYNK 165
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 85.8 bits (203), Expect = 3e-17
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = +2
Query: 248 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
N +T DV + F L L G+ GF KPSPIQ +P+ G D+L AK+
Sbjct: 34 NRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKN 93
Query: 428 GTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
GTGKT + + LE+ + N +Q ++L PTRE+ + ++G H G V GG
Sbjct: 94 GTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGK-HMGAQVMVTTGG 152
Query: 605 LSVNEXIXKFXKK 643
S+ + I + K
Sbjct: 153 TSLKDDILRLYNK 165
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Frame = +2
Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
R +++ E F+ +S+ TL GL+ +GF P+ IQ G+P+ G D+L AK+G+G
Sbjct: 40 RCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSG 99
Query: 437 KTVVFSIIALE-----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMG 601
KT+ F I +E K +GL ++++PTRE+ +V+ +IG+ H L+ ++G
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH-DLSAGLIIG 158
Query: 602 G 604
G
Sbjct: 159 G 159
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 66.5 bits (155), Expect = 2e-11
Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + L+++ ++ ++ G +KP+ IQL+ VP G D + AK+G+GKT F++ L+
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 470 KL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
KL + G+ ++LTPTRE+ I D K +G GL ++GGL + + K
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLG-RPIGLKEAVIVGGLDMMKQALSLANKP 126
Query: 647 H 649
H
Sbjct: 127 H 127
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Frame = +2
Query: 338 SSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILT 511
+ GF+KPS IQ + P+ K G D++ +A+SGTGKT FSI L+ ++ Q ++L+
Sbjct: 14 TEGFEKPSAIQQRAIKPILK-GRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLS 72
Query: 512 PTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
PTRE+ I V+ +G + + +GG ++ E I K H
Sbjct: 73 PTRELANQIQKVVLALGD-YMSVQCHACIGGTNIGEDIRKLDYGQH 117
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F LL L ++ GF+ PS +Q +P G D++ +AKSG GKT VF + L++
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L +G + V+++ TRE+ I ++ + + + GG+++ +
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKK 158
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F LL L ++ GF+ PS +Q +P G D++ +AKSG GKT VF + L++
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
L +G + V+++ TRE+ I ++ + + + GG+++ +
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKK 158
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Frame = +2
Query: 308 LSEFTLAGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--- 475
+SE TL G+ GF + IQ + PL K G DLL AK+G+GKT+ F + +E L
Sbjct: 579 VSEKTLQGIKDMGFTTMTEIQHKSIAPLLK-GRDLLGAAKTGSGKTLAFLVPVVELLYKL 637
Query: 476 --NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
NG V+I++PTRE+ V + + HH +MGG++ + K V+
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLLKHH-NFTYGIIMGGVNRKAEAERLQKGVN 696
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 53.6 bits (123), Expect = 1e-07
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
Frame = +2
Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV--------PLGKC---------- 397
++VE+ F M L E L G+ + GF+KPS IQ + P C
Sbjct: 60 EVVES--FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNH 117
Query: 398 ----GFDLLLEAKSGTGKTVVFSIIALEKLNLN----NG---LQVMILTPTREIXAXICD 544
D++ +A+SGTGKT F+I L++++ N NG Q ++L PTRE+ I
Sbjct: 118 YVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQK 177
Query: 545 VIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
V+ +G + + +GG +V E K + VH
Sbjct: 178 VVLALGD-YMHVKCHACIGGTNVREDRMKLEEGVH 211
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 50.8 bits (116), Expect = 9e-07
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F + E +A + +G+++P+P+Q +P+ G DL+ A++G+GKT + + L
Sbjct: 480 SFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLT 539
Query: 470 KLNLNNGLQ-------VMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIX 628
L + GL + + PTRE+ I ++ S H + V GG+SV
Sbjct: 540 SL-IKQGLNAPPRSPLALCVAPTRELAKQIYIEARKF-SDHTPIKVCVCYGGVSVPYQAS 597
Query: 629 KFXKKVH 649
+ + H
Sbjct: 598 QLERGCH 604
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 50.8 bits (116), Expect = 9e-07
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +2
Query: 380 VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXAXICDVI 550
+PL G D++ A++G+GKT F I EKL + G++ +IL+PTRE+ I
Sbjct: 312 LPLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFI 371
Query: 551 KQIGSHHKGLNVEXVMGGLSV 613
K++G GL ++GG SV
Sbjct: 372 KELG-RFTGLKSSVILGGDSV 391
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Frame = +2
Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS------IIALEKLNLNN----GL 493
G++ P+PIQ +P+G D++ A++G+GKT F+ I+ L K+ +N G
Sbjct: 120 GYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGP 179
Query: 494 QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
+IL PTRE+ I + I + G G+ V+GG
Sbjct: 180 YALILAPTRELAQQIEEEILKFG-RPLGIRTVSVIGG 215
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 463
+F + LS G+ GF KPS IQ +P L +++ +++SGTGKT F +
Sbjct: 104 SFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTM 163
Query: 464 LEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
L +++ QV+ L+PT E+ V + +G H + + + G
Sbjct: 164 LSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRG 211
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = +2
Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQVMILT 511
GF P+PIQ +P+ G D+ A +GTGKT F + LE+L + ++V+++T
Sbjct: 29 GFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVIT 88
Query: 512 PTREI 526
PTRE+
Sbjct: 89 PTREL 93
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Frame = +2
Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF----- 451
++F E +A + + +P+ IQ +P+ G D++ AK+G+GKT F
Sbjct: 517 ISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 576
Query: 452 -SIIALEKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
I+ +L + +G V+I PTRE+ I ++ G + ++V V GG
Sbjct: 577 VHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAY-NIHVVAVFGG 627
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F + L E L + +G++KP+P+Q + +P+ K DL+ A++G+GKT F I L +
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSR 936
Query: 473 L 475
+
Sbjct: 937 I 937
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
+F L E L + + ++KP+P+Q + +P+ G D++ A++G+GKT F + +
Sbjct: 712 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMT 771
Query: 470 KLNLNNGL-----------QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
+ +N GL Q M + PTRE+ I ++ +H L GG+SV+
Sbjct: 772 SM-MNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF-AHGTMLRPVVCYGGVSVS 829
Query: 617 EXI 625
+
Sbjct: 830 HQL 832
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 404 DLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGL 580
D++ A++G+GKT F++ L+ L N L +ILTPTRE+ I + + +GS G+
Sbjct: 3 DVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGS-GIGV 61
Query: 581 NVEXVMGGLSVNEXIXKFXKKVH 649
++GG+ + KK H
Sbjct: 62 KCAVIVGGIDMMSQALMLAKKPH 84
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +2
Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 523
G KP PIQ +P LL+++++GTGK++VF + +++ + G +I+ PTRE
Sbjct: 179 GITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSVQ--DPGRGYGTIIVVPTRE 236
Query: 524 IXA-XICDVIKQIGSHHKGLNVEXVMG-GLSVNEXIXK 631
+ + + +V + +G K + V G LS E + K
Sbjct: 237 LASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLK 272
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +2
Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
F+ +S+ T+ L G PIQ G D++ +A++GTGKT+ F++ +EK
Sbjct: 75 FSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEK 134
Query: 473 L-------NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
L +V+++ PTRE+ + + + + S+ L V + GG+
Sbjct: 135 LQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLKSN---LEVYCIYGGM 183
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +2
Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEKLNLNNG--L 493
L FQ P+PIQ+ + G D++ A++G+GKT+ +S+ + K N G
Sbjct: 87 LAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTP 146
Query: 494 QVMILTPTREI 526
+ILTPTRE+
Sbjct: 147 VALILTPTREL 157
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 442
+F L E L + + ++KP+P+Q + +P+ G D++ A++G+GKT
Sbjct: 135 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 323 LAGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALEKL 475
L L GF KP+PIQ +P D++ A++G+GKT+ F I ++ +
Sbjct: 142 LRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILT 511
L + G+ P+PIQ+ +P+ G D+++ A +G+GK + S G+QV++ T
Sbjct: 211 LSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKLLPSS--------PEMGVQVIVAT 262
Query: 512 PTREI 526
P R +
Sbjct: 263 PGRMV 267
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 494 QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
Q ++L+PTRE+ I V+ +G + + +GG ++ E I K H
Sbjct: 5 QALVLSPTRELANQIQKVVLALGD-YMSVQCHACIGGTNIGEDIRKLDYGQH 55
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
L +G V++L PTRE+ + +V +G H K L + GG I + + V
Sbjct: 127 LQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCK-LRSTCIYGGAPKGPQIRELERGV 183
>SB_1095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
TFT++ +S +A LISS +P+ G+P GK + + LE
Sbjct: 6 TFTALCISVLIVAILISSARASKNPVP--GIPFGKRSYLVRLE 46
>SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0)
Length = 373
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 218 AVMSLAHDIRNSTRTRDVQIVENVTF--TSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG 391
A+ D R +T T + E+V S L +I + F++P P+ G+P+
Sbjct: 174 AITPYVIDQRPNTYTFTKSLAEHVLLQEASGLPVSIFRPSIIGASFKEPLPVPSDGIPVY 233
Query: 392 KCGFDLL 412
CG +L
Sbjct: 234 NCGTGVL 240
>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
Length = 356
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 134 RPAVLFHFPTFVHFHRY*TVNKPPLLHS 51
RPA+++H P V FH+ V P+LHS
Sbjct: 196 RPAIIYHQPPIV-FHQPPPVVNQPILHS 222
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 185 LIRFKISVDFMEDPEKL-RPAVLFHFPTFVHFHRY*TVNKPPLLHS 51
++ ++ + + + P + RPA+++H P+ V FH+ V P++HS
Sbjct: 702 IVLYRAPIIYHQPPVVVHRPAIVYHQPSIV-FHQPPPVVNQPIMHS 746
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 274 NSGKCYVHFHASFRIYTSRIDIIGVPKTISNSTS 375
N+GKC HA F + +G PKT ++ T+
Sbjct: 277 NTGKCLDPTHADFLLREPTYQGVGAPKTTASPTT 310
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,160,332
Number of Sequences: 59808
Number of extensions: 364783
Number of successful extensions: 981
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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