Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C02
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_53704| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-18) 72 5e-13
SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) 52 5e-07
SB_47705| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_57929| Best HMM Match : K-box (HMM E-Value=4.3) 31 1.1
SB_55895| Best HMM Match : ig (HMM E-Value=2.2e-05) 29 2.5
SB_39813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_20449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_25294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_23341| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.065) 28 5.7
SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 82.2 bits (194), Expect = 3e-16
Identities = 44/115 (38%), Positives = 64/115 (55%)
Frame = +1
Query: 139 RKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTVXXXXXXXXX 318
+K P +E+ RRARIN L+EL L++ A++ + K+EKADILE+TV
Sbjct: 22 KKSKKPQMEKLRRARINDSLNELKSLVLEAMKKDASRYSKMEKADILEMTVKYLRSAPEK 81
Query: 319 XXXXXNPTVDVDRFRAGFTHAAXEVSRCLASIPGVDVRLGTQLMTHLGHRLNEMQ 483
+PT + ++RAG+ A EV+R L S V +L TQL++HL R Q
Sbjct: 82 QSKISDPT-SLAKYRAGYNECAAEVTRFLLSSENVSDQLRTQLLSHLASRCYTQQ 135
>SB_53704| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-18)
Length = 722
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 154 PMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTVXXXXXXXXXXXXXX 333
PM+E+ RRARIN+ L+EL L++ A++ + KLEKADILE+TV
Sbjct: 470 PMMEKRRRARINQSLNELKILILEAMKKDTSCYSKLEKADILEMTVKYLRAMKTTQQLTG 529
Query: 334 NPTVD---VDRFRAGFTHAAXEVSRCLASIPGVDVRLGTQLMTHL 459
D V ++RAGF A EV+R + VD+++ T++++HL
Sbjct: 530 IVPSDPSSVAQYRAGFNECALEVTRYFMANDNVDLQMKTRILSHL 574
>SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 68.9 bits (161), Expect = 3e-12
Identities = 42/107 (39%), Positives = 53/107 (49%)
Frame = +1
Query: 139 RKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTVXXXXXXXXX 318
RK PM+E+ RRARIN L+EL L++ L + K+EKADILE+TV
Sbjct: 20 RKAKKPMMEKLRRARINDSLNELKVLVLELLNKDASRYSKMEKADILEMTVGYLRAAQRI 79
Query: 319 XXXXXNPTVDVDRFRAGFTHAAXEVSRCLASIPGVDVRLGTQLMTHL 459
T D FRAGF A EVS L+ L L++HL
Sbjct: 80 EKRTQGSTPPSD-FRAGFNACAVEVSNRLSPADANTDNLRETLLSHL 125
>SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 139 RKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTV 291
R++M P+ ER RR RIN L EL L++SAL + ++EKADILE+TV
Sbjct: 23 RRIMKPITERLRRERINSSLKELKFLVLSALGQDVSRYSRMEKADILEMTV 73
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 139 RKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTV 291
RK P++E+ RR RINR L+EL L++ A + KLEKADILE+TV
Sbjct: 21 RKWSKPVMEKRRRERINRSLEELKRLVLEAQHRDCSRYTKLEKADILEMTV 71
>SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15)
Length = 272
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 139 RKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTV 291
RK ++E+ RR RINRCL EL L+ +AL+ EG + KLEKA+IL LTV
Sbjct: 12 RKRRRGLIEKKRRDRINRCLVELRRLVPTALEKEGSS--KLEKAEILHLTV 60
>SB_47705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Frame = +1
Query: 142 KVMXPMLERXRRARINRCLDELXELMVSAL-----QSEGXNVXKLEKADILELTV 291
K P+LER RRARIN L+EL L++S+L Q+E N K+EKA+ILELTV
Sbjct: 20 KSSKPLLERQRRARINHSLNELKTLVLSSLYQNCPQAE-QNCEKMEKAEILELTV 73
>SB_57929| Best HMM Match : K-box (HMM E-Value=4.3)
Length = 213
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +1
Query: 97 AEDGPQPVSRTYQYRKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLE 264
AED P PVS+ Q K + LE +R N +E ELM L+ +G K++
Sbjct: 120 AEDQPSPVSQQKQKIKYLSKPLEGVKRLLSNLFTEE--ELMRCTLKGKGRTSNKMQ 173
>SB_55895| Best HMM Match : ig (HMM E-Value=2.2e-05)
Length = 420
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -2
Query: 571 GSRNQTMKKQSREQGWEGLLVEFQCQRLLAAFRSVCARGGSLVECPTSRPH 419
G+ N T+ KQ Q W G +V F R C ECP H
Sbjct: 320 GAINITITKQGSSQAWGGGVVTFSPVSAADQARYTCTAREGASECPAVTKH 370
>SB_39813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 97 AEDGPQPVSRTYQYRKVMXPMLERXRRARINRCLDELXELMVSALQSEG 243
AED P PVS+ Q K + LE +R N +E ELM L+ +G
Sbjct: 67 AEDQPSPVSQQKQKIKYLSKPLEGVKRLLSNLFTEE--ELMRCTLKGKG 113
>SB_20449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 97 AEDGPQPVSRTYQYRKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLE 264
AED P PVS+ Q K + LE +R + +E ELM L+ +G K++
Sbjct: 67 AEDQPSPVSQQKQKIKYLSKPLEGVKRLLSDLFTEE--ELMRCTLKGKGRTSNKMQ 120
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 97 AEDGPQPVSRTYQYRKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLE 264
AED P PVS+ Q K + LE +R + +E ELM L+ +G K++
Sbjct: 212 AEDQPSPVSQQKQKIKYLSKPLEGVKRLLSDLFTEE--ELMRCTLKGKGRTSNKMQ 265
>SB_25294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 97 AEDGPQPVSRTYQYRKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLE 264
AED P PVS+ Q K + LE +R + +E ELM L+ +G K++
Sbjct: 7 AEDQPSPVSQQKQKIKYLSKPLEGVKRLLSDLFTEE--ELMRCTLKGKGRTSNKMQ 60
>SB_23341| Best HMM Match : Pkinase_Tyr (HMM E-Value=0.065)
Length = 263
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 11 RASTLFANVRSYSRHTYXQHVIRDRVFRSRKTVRSQSRALI 133
+A TL VRS S TY H I ++R +T+ SR+ +
Sbjct: 197 KADTLGDFVRSLSEFTY-SHAIVSELYRQYRTINQTSRSAV 236
>SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 38 RSYSRHTYXQHVIRDRVFRSRKTVRSQSRALIN 136
R + RH ++ +RDR SRK +R + +AL N
Sbjct: 921 RLHDRHEASRNRLRDRHEASRKRLRDRHKALCN 953
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,617,558
Number of Sequences: 59808
Number of extensions: 320788
Number of successful extensions: 774
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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