Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B17
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    26   0.31 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    26   0.31 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 456 SVFKLFRIFCLLADLVQDADDTNRYVVV 539
           SV+ L  I  +  DL Q ADD NRY  V
Sbjct: 202 SVYHLVEISEIHFDLCQAADDLNRYFEV 229


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 456 SVFKLFRIFCLLADLVQDADDTNRYVVV 539
           SV+ L  I  +  DL Q ADD NRY  V
Sbjct: 198 SVYHLVEISEIHFDLCQAADDLNRYFEV 225


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 148 PYTVRHIFQKSSHFSQIKS*NDIKSNTIVFEVDNTR 41
           PY   H   K S  +Q+K+   I +N   FE D  R
Sbjct: 218 PYGCEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCR 253


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 17/79 (21%), Positives = 33/79 (41%)
 Frame = -1

Query: 653 PFEVAYGRTEGLPVSGIPAQTEAVDQLFRHDSCFGRVQDYHISIGVVSVLNQVSEKTEYP 474
           P+E+ YGRT   P+  + +    V      +    + ++       +   NQ  E T   
Sbjct: 342 PYEILYGRTPPNPLDAVTSGLLPVRPPLTREEIHEKARENLKHHANLRQKNQKGEVTVL- 400

Query: 473 EELENGVVSENRLVPKEET 417
            E+E+ V+ +N++     T
Sbjct: 401 -EIEDWVLLKNKVTSDTRT 418


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -3

Query: 624 GPPSQRHPSADRGSGPVVPPRFLLRKGAGLPH 529
           GPP   HPS   G G  +    +   G GL H
Sbjct: 74  GPPYAPHPSLSSGLGGGLSGMPMPALGFGLGH 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,371
Number of Sequences: 336
Number of extensions: 3335
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)