Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B17
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   3.7  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   3.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.4  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +2

Query: 206  LTANIGTLLDLYGVEKGLDHFRSSQELTFDEFKYYLQHEVFSSLPKTVTLPIIRAI*QEN 385
            L ++I   +D+  +E G    +     T +E  Y  Q +VFS  P    LP    I  E 
Sbjct: 1173 LGSSINPAIDIGQIEGGF--MQGYGLFTLEEMVYSPQGQVFSRGPGMYKLPGFADIPGEF 1230

Query: 386  KRGVLAGLP 412
               +L G P
Sbjct: 1231 NVSLLTGAP 1239


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 577 SCSATIPASEGCRTTTY 527
           SC A +PA  GCR T +
Sbjct: 868 SCLAMLPAEGGCRRTKH 884


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 575 TGPLPRSALGCR*LGGPR 628
           +GP PRSALG    GG R
Sbjct: 574 SGPDPRSALGGNGSGGDR 591


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -1

Query: 569 RHDSCFGRVQDYHISIGVVSV-LNQVSEKTEYPEELENGVVSENRLVPKEETLTADQPAH 393
           +H  CF  ++  H +    S  + Q  ++  + +  + G +SE  +VP    LTA   A+
Sbjct: 373 KHGLCFNCLRKGHSARECRSTYVCQQCKRKHHSKLCKIGRLSEVEVVPSTSRLTATAQAN 432

Query: 392 LAYFLVIL 369
            +   VIL
Sbjct: 433 CSKKTVIL 440


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 254 LFPRRTGQVGCLCLRLVPLI*ICVQRHYFATNQT-HTIY 141
           + PR+ G VG + ++ + +  I   R YF  +Q  H +Y
Sbjct: 877 ILPRKIGGVGIIDIQALCISQIHQLRSYFVESQNRHELY 915


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,623
Number of Sequences: 2352
Number of extensions: 14354
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)