Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B17
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro...    29   5.5  
BT015211-1|AAT94440.1| 1049|Drosophila melanogaster RE48574p pro...    29   5.5  
AF006601-1|AAB62567.1|  882|Drosophila melanogaster Knockout pro...    29   5.5  
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA...    29   5.5  
AE014296-3466|AAF51676.1| 1049|Drosophila melanogaster CG10573-P...    29   5.5  
AE013599-2601|ABC66053.1|  190|Drosophila melanogaster CG34005-P...    29   5.5  

>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p
           protein.
          Length = 2313

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -3

Query: 624 GPPSQRHPSADRGSGPVVPPRFLLRK-GAGLPHID 523
           GPPS   P A RG G   PP+  L   G   PHI+
Sbjct: 5   GPPSNPSPVASRGRGRGRPPKVALSALGNTPPHIN 39


>BT015211-1|AAT94440.1| 1049|Drosophila melanogaster RE48574p
           protein.
          Length = 1049

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
 Frame = -2

Query: 625 RASQSAASQRRPRQWTSCSATIPASEGCRTTTYRLVSSAS*T--KSARRQNILKSLKTES 452
           R S    S   PR   S  AT   +      ++    S + T  K+A++  I K +  ES
Sbjct: 457 RRSPVYCSSSLPRSTQSIPATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHI-FES 515

Query: 451 SPKTDLSLKRRRLRQTSQHTSLIFLSYCPDDRQSYRLRQGTEDFVLE 311
           SP    +LK    ++   HT  + ++ C D++ +YR  Q +    LE
Sbjct: 516 SPSRSATLKATAAKR---HTDGLIINSCLDNKATYRSLQSSGPSSLE 559


>AF006601-1|AAB62567.1|  882|Drosophila melanogaster Knockout
           protein.
          Length = 882

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
 Frame = -2

Query: 625 RASQSAASQRRPRQWTSCSATIPASEGCRTTTYRLVSSAS*T--KSARRQNILKSLKTES 452
           R S    S   PR   S  AT   +      ++    S + T  K+A++  I K +  ES
Sbjct: 457 RRSPVYCSSSLPRSTQSIPATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHI-FES 515

Query: 451 SPKTDLSLKRRRLRQTSQHTSLIFLSYCPDDRQSYRLRQGTEDFVLE 311
           SP    +LK    ++   HT  + ++ C D++ +YR  Q +    LE
Sbjct: 516 SPSRSATLKATAAKR---HTDGLIINSCLDNKATYRSLQSSGPSSLE 559


>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
           protein.
          Length = 2362

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -3

Query: 624 GPPSQRHPSADRGSGPVVPPRFLLRK-GAGLPHID 523
           GPPS   P A RG G   PP+  L   G   PHI+
Sbjct: 5   GPPSNPSPVASRGRGRGRPPKVALSALGNTPPHIN 39


>AE014296-3466|AAF51676.1| 1049|Drosophila melanogaster CG10573-PA
           protein.
          Length = 1049

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
 Frame = -2

Query: 625 RASQSAASQRRPRQWTSCSATIPASEGCRTTTYRLVSSAS*T--KSARRQNILKSLKTES 452
           R S    S   PR   S  AT   +      ++    S + T  K+A++  I K +  ES
Sbjct: 457 RRSPVYCSSSLPRSTQSIPATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHI-FES 515

Query: 451 SPKTDLSLKRRRLRQTSQHTSLIFLSYCPDDRQSYRLRQGTEDFVLE 311
           SP    +LK    ++   HT  + ++ C D++ +YR  Q +    LE
Sbjct: 516 SPSRSATLKATAAKR---HTDGLIINSCLDNKATYRSLQSSGPSSLE 559


>AE013599-2601|ABC66053.1|  190|Drosophila melanogaster CG34005-PA
           protein.
          Length = 190

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 158 QTHTIYSSSHFSKEQSFFTN*KLKRHQIKHYR 63
           Q   +YS S  + EQ+   N KL R +++HYR
Sbjct: 129 QLANVYSISFNATEQALILNKKLSRIELEHYR 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,136,782
Number of Sequences: 53049
Number of extensions: 651701
Number of successful extensions: 1954
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1950
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)