Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B13
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985...    28   7.2  

>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
            27298701-27298766,27299151-27302660,27311604-27312224
          Length = 1676

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 87   YMDNFIVILITPVXKINKTTYEHEQ 13
            Y+D F+V+ I  +   +KT  EHE+
Sbjct: 984  YLDKFVVVFIDDILIYSKTKEEHEE 1008


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,387,609
Number of Sequences: 37544
Number of extensions: 228963
Number of successful extensions: 426
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)