Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B13
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069290-1|AAL39435.1|  299|Drosophila melanogaster GM14467p pro...    55   7e-08
AE014296-286|AAF47512.1|  299|Drosophila melanogaster CG7864-PA ...    55   7e-08

>AY069290-1|AAL39435.1|  299|Drosophila melanogaster GM14467p
           protein.
          Length = 299

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
 Frame = +1

Query: 349 AQPAEVLRAWQKDDQYEKQLADSISKLLPL-------QHGSKAIPISSLLYKSFTTLKDL 507
           A+  E++R+ QKD +Y  +LA+ +S +L L       ++      ++ L Y  F +  +L
Sbjct: 8   ARQPEIVRSVQKDARYTNELAEDLSDVLRLTGPRNWIKYNQMCRLLAELSYHGFASANNL 67

Query: 508 XTLXEQYSGIVQVXDSYHKLXSYYARLXSVLLSTFGENL 624
            TL E+Y+GI+QV  +Y ++ S   +L +++L   G++L
Sbjct: 68  QTLGEEYTGIIQVDGNYKQIPSRLLQLIAIVLEFGGDSL 106


>AE014296-286|AAF47512.1|  299|Drosophila melanogaster CG7864-PA
           protein.
          Length = 299

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
 Frame = +1

Query: 349 AQPAEVLRAWQKDDQYEKQLADSISKLLPL-------QHGSKAIPISSLLYKSFTTLKDL 507
           A+  E++R+ QKD +Y  +LA+ +S +L L       ++      ++ L Y  F +  +L
Sbjct: 8   ARQPEIVRSVQKDARYTNELAEDLSDVLRLTGPRNWIKYNQMCRLLAELSYHGFASANNL 67

Query: 508 XTLXEQYSGIVQVXDSYHKLXSYYARLXSVLLSTFGENL 624
            TL E+Y+GI+QV  +Y ++ S   +L +++L   G++L
Sbjct: 68  QTLGEEYTGIIQVDGNYKQIPSRLLQLIAIVLEFGGDSL 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,568,661
Number of Sequences: 53049
Number of extensions: 422396
Number of successful extensions: 689
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)