Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B12
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-li...   132   2e-31
AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical ...   132   2e-31
Z70267-3|CAA94214.1|  534|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z70267-2|CAA94213.1|  525|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    27   8.8  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    27   8.8  
U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF016449-14|AAG23991.1|  517|Caenorhabditis elegans Hypothetical...    27   8.8  

>AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-like
           protein protein.
          Length = 311

 Score =  132 bits (319), Expect = 2e-31
 Identities = 69/182 (37%), Positives = 107/182 (58%)
 Frame = +2

Query: 110 LKDFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEEGYFSKETQLKT 289
           L+D   ++IL  +++ K+  V+    D S   ++L  K+ F E     E   +   QL+ 
Sbjct: 23  LQDAKFQEILGADSSHKSLFVLLSHPDGSQ-GILLANKSPFSEEKSDIEKLLAT-AQLQE 80

Query: 290 FFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLTLPHL 469
              NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY+ +T P++
Sbjct: 81  ISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVTRPYI 140

Query: 470 EKEQFNLQWVYNILXGKSXQXRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRD 649
           EK Q NL WVYN L  +S   +IV ++   + GFVLL D+KWDG T E LY+LAI  +  
Sbjct: 141 EKYQLNLNWVYNCLEKRSEVDKIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHG 200

Query: 650 IK 655
           +K
Sbjct: 201 LK 202


>AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical
           protein Y113G7A.9 protein.
          Length = 311

 Score =  132 bits (319), Expect = 2e-31
 Identities = 69/182 (37%), Positives = 107/182 (58%)
 Frame = +2

Query: 110 LKDFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEEGYFSKETQLKT 289
           L+D   ++IL  +++ K+  V+    D S   ++L  K+ F E     E   +   QL+ 
Sbjct: 23  LQDAKFQEILGADSSHKSLFVLLSHPDGSQ-GILLANKSPFSEEKSDIEKLLAT-AQLQE 80

Query: 290 FFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLTLPHL 469
              NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY+ +T P++
Sbjct: 81  ISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVTRPYI 140

Query: 470 EKEQFNLQWVYNILXGKSXQXRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRD 649
           EK Q NL WVYN L  +S   +IV ++   + GFVLL D+KWDG T E LY+LAI  +  
Sbjct: 141 EKYQLNLNWVYNCLEKRSEVDKIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHG 200

Query: 650 IK 655
           +K
Sbjct: 201 LK 202


>Z70267-3|CAA94214.1|  534|Caenorhabditis elegans Hypothetical
           protein K04C1.2b protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
 Frame = +2

Query: 200 VALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPP--STINGVKTTIIYP 373
           VA +L +       DLS++GY S E+       N +  N E   P    +N     I   
Sbjct: 298 VAKVLPDHEGSSSQDLSDDGYSSPESSSMQLGRNSMTSNEETSHPVQQEMNKTDMVIADV 357

Query: 374 ATDKHIAKFSQQEVHIVLETPELYKK 451
            +   + + SQ  +H   + PE  ++
Sbjct: 358 ISQNRVHQPSQGPLHQEADAPEANRR 383


>Z70267-2|CAA94213.1|  525|Caenorhabditis elegans Hypothetical
           protein K04C1.2a protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
 Frame = +2

Query: 200 VALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPP--STINGVKTTIIYP 373
           VA +L +       DLS++GY S E+       N +  N E   P    +N     I   
Sbjct: 289 VAKVLPDHEGSSSQDLSDDGYSSPESSSMQLGRNSMTSNEETSHPVQQEMNKTDMVIADV 348

Query: 374 ATDKHIAKFSQQEVHIVLETPELYKK 451
            +   + + SQ  +H   + PE  ++
Sbjct: 349 ISQNRVHQPSQGPLHQEADAPEANRR 374


>U58758-1|AAB93429.2|  819|Caenorhabditis elegans Hypothetical
           protein ZK1127.7 protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +2

Query: 209 ILFEKNAFKENDLSEEGYFSKETQ---LKTFFENDIYGNFECFP-PSTINGVK 355
           ++ +KN  K+  L+EE  ++KET+   LK FF  +I  ++     P  ++G+K
Sbjct: 279 LMQDKNQRKQQGLAEECLYNKETRFVTLKDFFNYEIVCSWNLHSIPCLVDGLK 331


>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +2

Query: 254 EGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLET 433
           E Y  +  +L+ +    I G+F  FP  T     TT  +  TD         EV +V E 
Sbjct: 643 ESYKQRLLELEPYPGKIISGSFRDFPSQTDPSPATTDAWMQTDVEEQLMVSPEVSLVSEA 702

Query: 434 P-ELYKKLTLPHLEKE 478
           P  L       HL+++
Sbjct: 703 PSSLQDSRRSSHLDEK 718


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +2

Query: 254 EGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLET 433
           E Y  +  +L+ +    I G+F  FP  T     TT  +  TD         EV +V E 
Sbjct: 643 ESYKQRLLELEPYPGKIISGSFRDFPSQTDPSPATTDAWMQTDVEEQLMVSPEVSLVSEA 702

Query: 434 P-ELYKKLTLPHLEKE 478
           P  L       HL+++
Sbjct: 703 PSSLQDSRRSSHLDEK 718


>U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical
           protein T02G5.4 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +2

Query: 275 TQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKL 454
           T++K   E  +Y +   FP  TI+           DKHIA F+     ++L + E   + 
Sbjct: 289 TKIKKIKEGSVYSSIPIFPGGTIS-----------DKHIAAFTDGAAAVILASQEAVSEQ 337

Query: 455 TLPHLEK 475
            L  L +
Sbjct: 338 NLKPLAR 344


>AF016449-14|AAG23991.1|  517|Caenorhabditis elegans Hypothetical
           protein C50H11.1 protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
 Frame = +2

Query: 83  TTLNDNQLELKDFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEK--NAFKENDLSEE 256
           T   DN +E+   + EK+L +   ++ AC + +  +KS  A I F        +  +   
Sbjct: 143 TVCIDNPVEV---INEKVLADEAGKRKACTMIEHVEKSNAATICFTSGTTGAPKGAVLSH 199

Query: 257 GYFSKET----QLKTFFENDIYGNFECFP 331
           G  +  T    Q   F END+  N  C P
Sbjct: 200 GALTNNTNALVQEWGFTENDV--NLHCLP 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,436
Number of Sequences: 27780
Number of extensions: 327065
Number of successful extensions: 791
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)