Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B10
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CQN2 Cluster: Chromosome undetermined scaffold_24, wh...    36   1.1  
UniRef50_Q8IEC4 Cluster: Putative uncharacterized protein Phat8;...    35   1.5  
UniRef50_Q6FQV1 Cluster: Similar to sp|P32770 Saccharomyces cere...    33   4.5  
UniRef50_Q4T041 Cluster: Chromosome undetermined SCAF11359, whol...    33   7.9  
UniRef50_Q4RIU8 Cluster: Chromosome undetermined SCAF15041, whol...    33   7.9  

>UniRef50_A0CQN2 Cluster: Chromosome undetermined scaffold_24, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_24,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 256

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 19/77 (24%), Positives = 39/77 (50%)
 Frame = +1

Query: 247 IPENRNKSPQLKSPNKTKTKRPLXERTSIDLGKCFHLTLRNF*TSSQKGKHLFQVINYFS 426
           I   ++K    KS    K  +P+ ++++I L +   +   N  + ++ GKH+ Q+I+   
Sbjct: 128 ITPQKHKIRHTKSQQCIKKDQPINKQSTIQLAESQIIIENNSNSKTKNGKHIIQLIDNAH 187

Query: 427 NCTRIRNRMTNKISNSS 477
           N  R  +++ NK+   S
Sbjct: 188 NLIRKNSQILNKVQLQS 204


>UniRef50_Q8IEC4 Cluster: Putative uncharacterized protein Phat8;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein Phat8 - Plasmodium falciparum
           (isolate 3D7)
          Length = 868

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 31/103 (30%), Positives = 49/103 (47%)
 Frame = +1

Query: 181 KIKTRRRGRLMMNAYLHISFIGIPENRNKSPQLKSPNKTKTKRPLXERTSIDLGKCFHLT 360
           KIK +++  +  N Y  I+      N  +S  ++S N + T       ++I+ G C HLT
Sbjct: 618 KIKDKKKKSIFRNNYKEINNSVKENNFFRSQSIESNNSSITLSEESLYSNIENGNCPHLT 677

Query: 361 LRNF*TSSQKGKHLFQVINYFSNCTRIRNRMTNKISNSSITWN 489
                 S +KG  +   IN  +NC   R ++ NKI N  + WN
Sbjct: 678 SL---LSHEKGL-INNNINSNNNC--CREQIKNKI-NFELLWN 713


>UniRef50_Q6FQV1 Cluster: Similar to sp|P32770 Saccharomyces
           cerevisiae YDL167c ARP1; n=1; Candida glabrata|Rep:
           Similar to sp|P32770 Saccharomyces cerevisiae YDL167c
           ARP1 - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 603

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 477 YYLEPQARQVPQLQPSHAVIARPSYSSNGGEASVGAALAVSDNGANSANT 626
           Y  + Q RQ+ Q+Q ++ + A    S+NGG++ + ++   + NG  S N+
Sbjct: 426 YNQQQQLRQLQQMQQTYQMYAANRASNNGGKSPIQSSYRSNYNGGQSGNS 475


>UniRef50_Q4T041 Cluster: Chromosome undetermined SCAF11359, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF11359, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 733

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 495 LEVPGNRTVGDFVCHPVADSSTVAEVIDYLK 403
           L+    R  G+FV H +AD++   EV+DYLK
Sbjct: 93  LQAENERLFGEFVDHCLADTTDCPEVLDYLK 123


>UniRef50_Q4RIU8 Cluster: Chromosome undetermined SCAF15041, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF15041,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 732

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 495 LEVPGNRTVGDFVCHPVADSSTVAEVIDYLK 403
           L+    R  G+FV H +AD++   EV+DYLK
Sbjct: 70  LQAENERLFGEFVDHCLADTTDCPEVLDYLK 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,669,112
Number of Sequences: 1657284
Number of extensions: 8573454
Number of successful extensions: 27242
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27232
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)