Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B05
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...   105   3e-25
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.5  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   4.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.8  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score =  105 bits (253), Expect = 3e-25
 Identities = 44/77 (57%), Positives = 59/77 (76%)
 Frame = +3

Query: 417 RIYNNILXTIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQKSX 596
           +I  +IL  IG TPL++LN IPK YG++CE++AKCEF+NPGGS+KDRI+Y M+ +A+   
Sbjct: 34  KIMPDILTAIGQTPLIKLNNIPKSYGIKCEIYAKCEFLNPGGSVKDRIAYRMIQDAEDKG 93

Query: 597 IAKSGTRFIEPTSXNTG 647
           + K G   IEPTS NTG
Sbjct: 94  LLKPGCTIIEPTSGNTG 110


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 402 SFTRNRIYNNILXTIGDTPLVRLNRIPKDY 491
           SF  +++YN +L  I     V+  +IP+++
Sbjct: 673 SFLFSQLYNALLILISTVYAVKTRKIPENF 702


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 402 SFTRNRIYNNILXTIGDTPLVRLNRIPKDY 491
           SF  +++YN +L  I     V+  +IP+++
Sbjct: 763 SFLFSQLYNALLILISTVYAVKTRKIPENF 792


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/75 (20%), Positives = 24/75 (32%)
 Frame = +3

Query: 411 RNRIYNNILXTIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKDRISYTMVLEAQK 590
           R +       TI D         P+D  L+C      E  N       +I Y ++ +   
Sbjct: 40  RKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCVLEKFNVMDKKNGKIRYNLLKKVIP 99

Query: 591 SXIAKSGTRFIEPTS 635
               + G   I+  S
Sbjct: 100 EAFKEIGVEMIDSCS 114


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 560 FIYNGTGSTKIXNCEIGHKIH 622
           F+ NG   T+  NCEIG   H
Sbjct: 868 FVLNG--ETRTINCEIGGLQH 886


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,367
Number of Sequences: 438
Number of extensions: 3110
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)