Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_B04
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076) 36 0.038
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 33 0.20
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 1.1
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 31 1.1
SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T+S C C +YT +TSY + S+ + T
Sbjct: 109 SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTTSYTSTT 168
Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
S S+ T+ T + +T +T
Sbjct: 169 SYTST--TSYTSTTSYTTTTSYT 189
Score = 35.1 bits (77), Expect = 0.050
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T+S C +YT +TSY S+ + T
Sbjct: 103 SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTT 162
Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
S S+ T+ T + ST +T
Sbjct: 163 SYTST--TSYTSTTSYTSTTSYT 183
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +2
Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
PS T T+ T + S ++T+ T+S +YT++TSY + S+ +
Sbjct: 60 PSYTPTTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 119
Query: 416 TSTCSSIGTAVNRTYRFISTEMFT 487
TS S+ T+ T + ST +T
Sbjct: 120 TSYTST--TSYTSTTSYTSTTSYT 141
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S +T+ T+S C +YT++TSY + S+ + T
Sbjct: 121 SYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSYTSTTSYTSTTSYTSTTSYTSTT 180
Query: 419 STCSSIGTAVNRTY 460
S ++ +Y
Sbjct: 181 SYTTTTSYTTTTSY 194
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T+S +YT++TSY + S+ T
Sbjct: 85 SYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTT 144
Query: 419 S-TCSSIGTAVNRTYRFISTEMFT 487
S TC+ T+ T + ST +T
Sbjct: 145 SYTCT---TSYTCTTSYTSTTSYT 165
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T+S +YT +TSY S+ T
Sbjct: 97 SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCTTSYTCTT 156
Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
S S+ T+ T + ST +T
Sbjct: 157 SYTST--TSYTSTTSYTSTTSYT 177
>SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076)
Length = 255
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 132 RRIFPPQFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 272
R+ + + KL+V+E Y+ + N+ T R+FGI R+ I +WL+ E
Sbjct: 75 RKSYSREMKLEVIEWYKNNGL---NKNKTCRQFGIPRKCITQWLKME 118
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFI-- 409
PS T TS T + S S+T+ T+S C +YT++TSY S+
Sbjct: 66 PSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTTSYTSTTSYTPTTSYTPT 125
Query: 410 -AYTSTCS 430
+YTST S
Sbjct: 126 PSYTSTPS 133
Score = 31.9 bits (69), Expect = 0.47
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T S +YT++TSY + S+ + T
Sbjct: 37 SYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 96
Query: 419 S-TCSSIGTAVNRTYRFISTEMFT 487
S TC+ T+ T + ST +T
Sbjct: 97 SYTCT---TSYTSTTSYTSTTSYT 117
Score = 31.5 bits (68), Expect = 0.62
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFI--- 409
S T TS T + S S+T+ T+S +YT++TSY + S+
Sbjct: 7 SYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTP 66
Query: 410 AYTSTCS-SIGTAVNRTYRFISTEMFT 487
+YTST S + T+ T + ST +T
Sbjct: 67 SYTSTTSYTSTTSYTSTTSYTSTTSYT 93
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T+S C +YT++TSY + S+ T
Sbjct: 61 SYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTTSYTSTTSYTPTT 120
Query: 419 S 421
S
Sbjct: 121 S 121
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSF---I 409
S T TS T + S S+T+ T+S +YT++TSY S+
Sbjct: 49 SYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTT 108
Query: 410 AYTSTCS-SIGTAVNRTYRFISTEMFTXN 493
+YTST S + T+ T + ST +T +
Sbjct: 109 SYTSTTSYTPTTSYTPTPSYTSTPSYTSS 137
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T T T + S S+T+ T+S C +YT++TSY + S+ + T
Sbjct: 13 SYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTSYTCTTSYTSTTSYTSTTSYTSTT 72
Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
S S+ +YR ST +T
Sbjct: 73 SYTSTTSYTSTTSYR--STPSYT 93
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+ + T S C C +YT++TSY S+ T
Sbjct: 67 SYTSTTSYTSTTSYTSTTSYRSTPSYTPTPSYTCTTSYTCTTSYTSTTSYTCTTSYTCTT 126
Query: 419 S 421
S
Sbjct: 127 S 127
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 STAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYTS-TCSSIGTAVNRTYRFISTEM 481
+T+ T+S C +YT++TSY + S+ TS TC+ T+ T + ST
Sbjct: 11 TTSYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTSYTCT---TSYTSTTSYTSTTS 67
Query: 482 FT 487
+T
Sbjct: 68 YT 69
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T S C +YT +TSY + S+ T
Sbjct: 61 SYTSTTSYTSTTSYTSTTSYTSTTSYRSTPSYTPTPSYTCTTSYTCTTSYTSTTSYTCTT 120
Query: 419 S-TCSS 433
S TC++
Sbjct: 121 SYTCTT 126
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 356 CKITYTTSTSYDANVSFIAYTSTCSSIGTAVNRTYRFISTEMFT 487
C +YT +TSY + S+ TS S+ T+ T + ST +T
Sbjct: 4 CTPSYTCTTSYTSTTSYTCTTSYTST--TSYTSTTSYTSTTSYT 45
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 263 TS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYTS-TCSS 433
TS T + +T+ +T+S C C +YT +TSY S+ TS TC++
Sbjct: 135 TSTTSYTPTTSYTPTTSYTLTTSYTCTTSYTCTTSYTHTTSYTCTTSYTCTTSYTCTT 192
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +2
Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
PS T T T + S +T+ T+S C +YT +TSY S+
Sbjct: 96 PSYTPTPSYTCTTSYTSTTSYTPTTSYTPTTSYTCTTSYTSTTSYTPTTSYTPTTSYTLT 155
Query: 416 TS-TCS---SIGTAVNRTYRFISTEMFT 487
TS TC+ + T+ T + T +T
Sbjct: 156 TSYTCTTSYTCTTSYTHTTSYTCTTSYT 183
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +2
Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
PS T TS T + S S+ + T+S +YT++TSY + S+ +
Sbjct: 144 PSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTST 203
Query: 416 TSTCSSIGTAVNRTYRFISTEMFT 487
TS S+ T+ T + +T +T
Sbjct: 204 TSYTST--TSYTPTPSYTATTSYT 225
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T S +YT++TSY + S+ + T
Sbjct: 139 SYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 198
Query: 419 STCSSIGTAVNRTYRFISTEMFT 487
S S+ T+ T + T +T
Sbjct: 199 SYTST--TSYTSTTSYTPTPSYT 219
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S S+T+ T+S +YT++TSY S+ A T
Sbjct: 163 SYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTPTPSYTATT 222
Query: 419 STCSS 433
S S+
Sbjct: 223 SYTST 227
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/86 (30%), Positives = 35/86 (40%)
Frame = +2
Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAY 415
PS T TS T + S + + T S C +YT++TSY S Y
Sbjct: 165 PSYTSTTSYTSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTS---Y 221
Query: 416 TSTCSSIGTAVNRTYRFISTEMFTXN 493
TST T+ T + ST +T N
Sbjct: 222 TST-----TSYTPTTSYTSTTSYTSN 242
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 239 SQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYT 418
S T TS T + S+ + T+S C +YT +TSY + S+ T
Sbjct: 172 SYTSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPTT 231
Query: 419 STCSSIGTAVNRTY 460
S S+ N +Y
Sbjct: 232 SYTSTTSYTSNPSY 245
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 236 PSQTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFI-- 409
PS T TS T + S+T+ T+S +YT++TSY +N S+
Sbjct: 189 PSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPTTSYTSTTSYTSNPSYTPT 248
Query: 410 -AYTSTCS 430
+YT T S
Sbjct: 249 PSYTPTTS 256
>SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 299 ESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSFIAYTSTCSSIGTAVNRTYRFISTE 478
+S+ AG W+ +KC Y T+ SY+A + T CSS T F+S+
Sbjct: 26 KSNQAGIECEQCLLWYHKKC--IYQTTKSYEALQNNSKLTWICSSCLFPNFSTTHFMSSL 83
Query: 479 MFT 487
FT
Sbjct: 84 DFT 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,883,089
Number of Sequences: 59808
Number of extensions: 293051
Number of successful extensions: 982
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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