Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B04
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006642-1|AAP35288.1|  459|Homo sapiens zinc finger protein 259...    36   0.17 
BC111028-1|AAI11029.1|  459|Homo sapiens zinc finger protein 259...    36   0.17 
BC017380-1|AAH17380.1|  459|Homo sapiens zinc finger protein 259...    36   0.17 
BC017349-1|AAH17349.1|  459|Homo sapiens zinc finger protein 259...    36   0.17 
BC012162-1|AAH12162.1|  459|Homo sapiens zinc finger protein 259...    36   0.17 
BC004256-1|AAH04256.1|  459|Homo sapiens zinc finger protein 259...    36   0.17 
AF019767-1|AAC33514.1|  459|Homo sapiens zinc finger protein pro...    36   0.17 

>BT006642-1|AAP35288.1|  459|Homo sapiens zinc finger protein 259
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


>BC111028-1|AAI11029.1|  459|Homo sapiens zinc finger protein 259
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


>BC017380-1|AAH17380.1|  459|Homo sapiens zinc finger protein 259
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


>BC017349-1|AAH17349.1|  459|Homo sapiens zinc finger protein 259
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


>BC012162-1|AAH12162.1|  459|Homo sapiens zinc finger protein 259
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


>BC004256-1|AAH04256.1|  459|Homo sapiens zinc finger protein 259
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


>AF019767-1|AAC33514.1|  459|Homo sapiens zinc finger protein
           protein.
          Length = 459

 Score = 35.5 bits (78), Expect = 0.17
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 486 PXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIASL 602
           P     P  AP PP  P  LFRP   EDE+++   I SL
Sbjct: 12  PGAAVAPSPAPAPPPAPDHLFRPISAEDEEQQPTEIESL 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,863,048
Number of Sequences: 237096
Number of extensions: 1434486
Number of successful extensions: 4442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)