Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B04
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-3|CAA19468.1|  572|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81508-3|CAB04144.1|  288|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF067214-6|AAC17005.2|  457|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AL023828-3|CAA19468.1|  572|Caenorhabditis elegans Hypothetical
           protein Y17G7B.2b protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 242 QTDPKVATS*TCFASGAVKESSTAGAITSSICCWFPRKCKITYTTSTSYDANVSF-IAYT 418
           Q  PK A +  C+  G  +E  +   + S+   WF  +C   +   +     V F I YT
Sbjct: 11  QAAPKTAPTTVCYCDGK-RELGSVEVVCSTCLKWFHGRCLKEFHEFSRNSNGVPFMICYT 69

Query: 419 STC 427
            TC
Sbjct: 70  FTC 72


>Z81494-14|CAJ43905.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 133 AVFFHHNLNYKSLKRTDVIPNVEETNVPPLGSLASIADRSK 255
           A F+ ++ NYK    T ++P VE+T +  L   +++    K
Sbjct: 137 AAFYSNSGNYKGFGDTKIVPGVEQTKIRALLEKSAVGTDEK 177


>Z81494-8|CAB54212.3|  707|Caenorhabditis elegans Hypothetical
           protein F02E9.9a protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 133 AVFFHHNLNYKSLKRTDVIPNVEETNVPPLGSLASIADRSK 255
           A F+ ++ NYK    T ++P VE+T +  L   +++    K
Sbjct: 99  AAFYSNSGNYKGFGDTKIVPGVEQTKIRALLEKSAVGTDEK 139


>Z81057-7|CAJ43903.2|  745|Caenorhabditis elegans Hypothetical
           protein F02E9.9b protein.
          Length = 745

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 133 AVFFHHNLNYKSLKRTDVIPNVEETNVPPLGSLASIADRSK 255
           A F+ ++ NYK    T ++P VE+T +  L   +++    K
Sbjct: 137 AAFYSNSGNYKGFGDTKIVPGVEQTKIRALLEKSAVGTDEK 177


>Z81508-3|CAB04144.1|  288|Caenorhabditis elegans Hypothetical
           protein F20E11.5 protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 300 SLTAPLAKQVQLVATFGSVCDGCQT 226
           + T P++ QV  +AT G+  DGC T
Sbjct: 79  TFTDPMSAQVSCIATPGTNSDGCST 103


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
            F35A5.1 protein.
          Length = 1274

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 447  STEPIDLSVRRCSPXTLAHPPVAPEPPRKPFKLFRPYLLEDEDEKRXXIAS 599
            + +P DLS ++  P         P P + P K ++P   ED+DE    +++
Sbjct: 953  AAKPRDLSPKKAIPIPANTQEAPPTPVKNPVKKWKP-PWEDDDEPAEPVSA 1002


>AF067214-6|AAC17005.2|  457|Caenorhabditis elegans Hypothetical
           protein F56C3.2 protein.
          Length = 457

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 403 FHCLHLYLFKHWYSRQQN 456
           +H ++   F HWYSR QN
Sbjct: 39  YHLINFQEFNHWYSRFQN 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,375,161
Number of Sequences: 27780
Number of extensions: 213830
Number of successful extensions: 700
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)