Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B03
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81522-1|CAB61004.1|  264|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    29   2.2  
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    29   2.9  
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical...    29   2.9  

>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 389  PLRGGRNLVQLSTALQAQSDA-DAQKQLQIQKE--EHETAIXNYQ 514
            PLR GR++V L +  Q+Q+D  D  K L++ K+  EH + I   Q
Sbjct: 3506 PLRNGRSVVSLKST-QSQNDVMDEAKALRLHKQRLEHRSRILEQQ 3549


>Z81522-1|CAB61004.1|  264|Caenorhabditis elegans Hypothetical
           protein F15D3.1b protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 389 PLRGGRNLVQLSTALQAQSDA-DAQKQLQIQKE--EHETAIXNYQ 514
           PLR GR++V L +  Q+Q+D  D  K L++ K+  EH + I   Q
Sbjct: 96  PLRNGRSVVSLKST-QSQNDVMDEAKALRLHKQRLEHRSRILEQQ 139


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 389  PLRGGRNLVQLSTALQAQSDA-DAQKQLQIQKE--EHETAIXNYQ 514
            PLR GR++V L +  Q+Q+D  D  K L++ K+  EH + I   Q
Sbjct: 3506 PLRNGRSVVSLKST-QSQNDVMDEAKALRLHKQRLEHRSRILEQQ 3549


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +2

Query: 389  PLRGGRNLVQLSTALQAQSDA-DAQKQLQIQKE--EHETAIXNYQ 514
            PLR GR++V L +  Q+Q+D  D  K L++ K+  EH + I   Q
Sbjct: 3506 PLRNGRSVVSLKST-QSQNDVMDEAKALRLHKQRLEHRSRILEQQ 3549


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 374 KENIQPLRGGRNLVQLSTALQAQSDADAQKQLQIQKEEHETAIXNYQXPDPLEPW 538
           K+  +  R    L QL  A +A +DA A    +   E   T     + P+P++ W
Sbjct: 333 KQEEKKRRRLEKLGQLPVAAEASADASASASAEASAETPSTTPEQEKTPEPVDDW 387


>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.2 protein.
          Length = 1173

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 374 KENIQPLRGGRNLVQLSTALQAQSDADAQKQLQIQKEEHETAIXNYQXPDPLEPW 538
           K+  +  R    L QL  A +A +DA A    +   E   T     + P+P++ W
Sbjct: 333 KQEEKKRRRLEKLGQLPVAAEASADASASASAEASAETPSTTPEQEKTPEPVDDW 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,919,550
Number of Sequences: 27780
Number of extensions: 240315
Number of successful extensions: 546
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)