Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_B01
(496 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 28 0.89
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.6
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 2.1
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 2.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 2.1
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 2.1
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 2.7
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 3.6
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 26 3.6
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 4.7
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 4.7
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 4.7
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 6.3
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 6.3
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 6.3
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 8.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 25 8.3
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 27.9 bits (59), Expect = 0.89
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 318 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVXESHK 488
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ S +
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 489 L 491
L
Sbjct: 112 L 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 339 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 443
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 389 LGRALDVLPRLFQSLLGLAVRVSERCPGDSW 297
+G + L RLF SL GL ++ PG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 134 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 253
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 128 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 217
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 306 SRAALGDANGKAKEALEQSRQNIERTAEE 392
S A G NG+AKE E+ R ++T E+
Sbjct: 468 SSAKQGKGNGRAKETPEEKRARKKKTKED 496
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 2.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 351 LEQSRQNIERTAEELRKAHPDVEK 422
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 3.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 98 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 274
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 275 LQQL 286
Q+
Sbjct: 73 NNQI 76
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.8 bits (54), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 366 ASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 244
AST+ K PWP + L +P + + CS+ +E ++ +
Sbjct: 38 ASTLEKEPWPASTALLVMPG---GRDMGYCSSFNETIYRKI 75
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 4.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 107 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDA 232
L + V R F + +EH+ K+LE+Q + L +SKDA
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDA 233
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 330 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 425
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 4.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 372 CSASTVPKPPWPCRSRLRALPWRLLAK 292
C +T+PKPP+ + L LP + A+
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKSTAQ 316
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 6.3
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 318 LGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 458
L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 525 LTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 445 FSRRAVAFFSTSGWALRSSSAVRSMF 368
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 324 DANGKAKEALEQSRQNIERTAEE 392
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 24.6 bits (51), Expect = 8.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 393 LRKAHPDVEKNATALREKLQAAV 461
L AH D+E T++RE+L++ +
Sbjct: 267 LDSAHSDLELELTSIRERLESLI 289
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 24.6 bits (51), Expect = 8.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 464
KAKE ++ R +RTA E+RK +E+ R + A Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQ 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,542,199
Number of Sequences: 5004
Number of extensions: 26091
Number of successful extensions: 123
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 194131776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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