Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_B01
(496 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 33 0.17
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 32 0.29
04_01_0180 + 2034021-2034023,2034741-2035088 31 0.67
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 29 2.7
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 29 2.7
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 28 3.6
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 28 3.6
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 28 3.6
07_03_0441 + 18256103-18258076 28 4.7
03_05_0373 + 23581812-23583293 28 4.7
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 28 4.7
01_01_0401 + 3043634-3043894,3045610-3045849 28 4.7
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 27 6.3
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 27 6.3
06_01_0008 + 141405-142421 27 6.3
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282... 27 6.3
04_01_0154 - 1775693-1775942,1776834-1777588 27 6.3
03_06_0040 + 31240164-31241102,31241280-31241897 27 6.3
02_04_0193 - 20801959-20802583,20803372-20803448,20803530-208036... 27 6.3
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 27 8.3
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 27 8.3
01_01_0178 + 1514878-1515417 27 8.3
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 312 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 458
AA+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A
Sbjct: 514 AAIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEA 562
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 31.9 bits (69), Expect = 0.29
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 384 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 226
P R SA T+ WP L A+ +R L AL+CC + S PS L++C S
Sbjct: 99 PGLRASAPTLR---WPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.7 bits (66), Expect = 0.67
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 345 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 467
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 324 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 458
DA G+ EA+E + E+L A+PDV+ L E L+ A
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEA 681
>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 241 QQGLEGRLRVRAATAQRLRQESPGQRSETRTARPRRLWN 357
+Q G+ TA+ RQ S GQ+S + A P R W+
Sbjct: 1132 RQWSSGQQSYNTVTAEPSRQWSSGQQSYSNPAEPSRQWS 1170
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 321 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 452
GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 47 GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 40 RRCEPDCNXRGVC 2
+RCE DCN +GVC
Sbjct: 108 KRCEQDCNGQGVC 120
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 402 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSC 280
PC P P R ++T + PW R R + W L C
Sbjct: 26 PCTTPAPRMRSLSATTTRRPWRTGWRGRPMRWASLVVMKLC 66
>07_03_0441 + 18256103-18258076
Length = 657
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -2
Query: 390 PRPCARCSASTVPKP-PWPCR---SRLRALPWRLLAKALSCCST 271
PRP A SAS+ P P PW R LR+ P L A + C+T
Sbjct: 42 PRPYAASSASSSPTPSPWLARVVSLILRSPPATLAADLRAFCAT 85
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 378 ARCSASTVPKPPW 340
+RCSAST PK PW
Sbjct: 66 SRCSASTPPKSPW 78
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 354 PKPPWPCRSRL-RALPWRLLAKALSCCSTDSEPSF 253
P PP P + + R + W+ A +CC D P F
Sbjct: 82 PPPPPPKQEKAKRVVRWKCAAGCGACCKLDKGPDF 116
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = -2
Query: 402 PCGAPRPCARCSASTVP----KP---PWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 244
P +P A+C A VP +P P P R + L + CS+D E SF+A
Sbjct: 34 PPPSPPEAAKCCADGVPVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFCSSDVEGSFEAF 93
Query: 243 LKSC 232
K C
Sbjct: 94 TKQC 97
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESHKL 491
KA LE+ ++E E A+ ++++ L+EK + V+N H+L
Sbjct: 391 KANGNLEKQLLSLEEKYENATHANGELKEELLFLKEKFVSVVENNTRLEHQL 442
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 26 RFASPPHSVSRQHIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQF 205
RF + P S SR+ ++V A + +R A + +K + E H L +
Sbjct: 694 RFKAIP-SHSRRRSTFEQYVRTRADEERKEKRAAQRAAVEAYKQLLEEASEGHTILIHKM 752
Query: 206 NSLTKSKDAQDFSKAW 253
+ +KD ++F + W
Sbjct: 753 QDINSNKDYKEFKRKW 768
>06_01_0008 + 141405-142421
Length = 338
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 396 GAPRPCARCSASTVPKPPWPCR---SRLR-ALPWRLLAKALSCCSTDSEPSFQ 250
G+ RP A SAS P P P R R R +LPW L A A + S P+ Q
Sbjct: 259 GSHRPAAPASASASPSPAPPPRLAERRFRISLPWPLRA-AFGGQAESSNPTNQ 310
>05_01_0361 -
2824728-2826043,2826288-2826507,2827616-2827702,
2827726-2827980,2828704-2828733
Length = 635
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 22 SPVRISSALSLSTA--HHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 183
SP R++ L T HH VR +HR+ P+ AT S + +G H +P
Sbjct: 473 SPSRVNPVLLCETGQRHHYSSVRHGDPVHRNSPQISVATSPSPIRRGD-PAHINIP 527
>04_01_0154 - 1775693-1775942,1776834-1777588
Length = 334
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +1
Query: 91 LRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAHQVKGRTGLQQGLEGRLRV 270
L+L + R DG R + R +G ++ ++ G+T + G EGR R
Sbjct: 121 LKLPTTAARQDGGATRRNSSRRRRPRWRGNVARRSSSAGTQRRLTGQTAVGDGGEGRARR 180
Query: 271 RAATAQRLRQESPGQRSETRTARPRR 348
A + R R+ + G S R RR
Sbjct: 181 GARGSWRRRRLATGASSWLLGGRGRR 206
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 104 ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 259
A+AQ RR+APD D+ +E L+ + N L + + D+ A W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242
>02_04_0193 -
20801959-20802583,20803372-20803448,20803530-20803646,
20804147-20804250,20804359-20804428,20804547-20804644,
20804747-20804840,20805269-20805359,20805453-20805545,
20805635-20805960,20806162-20806641
Length = 724
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 271 RAATAQRLRQESPGQRSETRTARPRRLWN 357
R T Q +RQE QR ++ + + LWN
Sbjct: 361 RGDTVQIIRQELKSQRRHVKSLKKKSLWN 389
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 321 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATALREKLQAAVQNTV 473
GD++G AKE L + SR ++ E RK +E K LR + Q +V
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSV 172
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 312 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 470
AA+G G A A SR ++ R +L H D ++K + +NT
Sbjct: 141 AAVG-GGGAAVSARPASRASVRRNVSDLAAEHSDANDGIPVRKDKANWSARNT 192
>01_01_0178 + 1514878-1515417
Length = 179
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 354 PKPPWPCRSRLRALPWRLLAKALSC 280
P PPW C +L+ P R+ C
Sbjct: 43 PSPPWDCCDKLKQSPLRIWPPKYKC 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,446,001
Number of Sequences: 37544
Number of extensions: 217853
Number of successful extensions: 1158
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -