Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_B01
(496 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45456| Best HMM Match : DUF963 (HMM E-Value=0.00083) 32 0.30
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 31 0.69
SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 30 1.2
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 2.8
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 2.8
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33) 28 3.7
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 28 3.7
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011) 28 4.9
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 27 6.4
SB_19070| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 27 8.5
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_39744| Best HMM Match : Sybindin (HMM E-Value=3.6) 27 8.5
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 27 8.5
SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_45456| Best HMM Match : DUF963 (HMM E-Value=0.00083)
Length = 337
Score = 31.9 bits (69), Expect = 0.30
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -2
Query: 396 GAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDL 217
G P P + +P PP C+S +P L+A C D PS L +C S +
Sbjct: 183 GIPSPLVAYGSDGIPSPPVACKS--DGIPSTLVA-----CKFDGIPS---SLVACKSDGI 232
Query: 216 VSELNCC-SKVLWNSLVWC 163
S L C S + +SLV C
Sbjct: 233 TSSLAACESDGITSSLVGC 251
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -2
Query: 396 GAPRPCARCSASTVPKPPWPCR-----SRLRALPWRLLAKALSCCSTDSEPS 256
G P P C +P PP C+ S L A + + +L C +D PS
Sbjct: 123 GIPSPLVACKFDDIPSPPVACKFDDIPSTLVACEFDGIPSSLVTCESDGIPS 174
>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 396 GAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQA 247
G PC+RC + P P R + WR LA ALS +T + A
Sbjct: 95 GQNNPCSRCGLLSCPTTTSP-EKRRKTPSWRTLAPALSPSATQPAACYDA 143
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 30.7 bits (66), Expect = 0.69
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 306 SRAALGDANGKAKEALEQSRQNIERTAEELRK--AHPDV-EKNATALREKLQAAVQNTVX 476
+ A D K ++A E+ +Q R E+ +K A+ + EK+ LREK+Q+ + +
Sbjct: 1601 AEATTSDLQTKLRKAKEKIKQGSARQEEQTKKYKAYQEKREKDVAELREKVQSLEKELME 1660
Query: 477 ESHKL 491
S KL
Sbjct: 1661 TSEKL 1665
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 330 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 464
N + EAL+ + + +E+ + +K+ TAL+E+L + VQ
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQ 686
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 0.69
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 152 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 289
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 30.7 bits (66), Expect = 0.69
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 336 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 467
KAKEAL + + ++ T E+L+ AH + + L+ K +N
Sbjct: 1829 KAKEALSKENKELKGTVEQLQDAHEKLSEENRLLKRKENEQSEN 1872
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 318 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 422
L + N K K+ALE+ R+ ++ +E ++ D+E+
Sbjct: 1961 LAEQNEKLKDALEELREAVQHLWDEKKEKERDIEQ 1995
>SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.3 bits (65), Expect = 0.91
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 384 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALL 241
P +RC + P P + R + L WR LA ALS +T + A L
Sbjct: 54 PWSRCGLLSCPTTTSPAKRR-KTLSWRTLAPALSPSATQPDACCDAAL 100
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 312 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 467
A + + K K ++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 342 AEITEELSKEKAGNKELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +3
Query: 336 KAKEALEQSRQN-------IERTAEELRKAHPDVEKNATALREKLQAA 458
+AK LEQ+R+ +E T LRK +EK T +K QAA
Sbjct: 618 EAKRELEQTREKCAHYKNGLEETEAMLRKLEAHIEKEITTWEQKYQAA 665
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/104 (25%), Positives = 43/104 (41%)
Frame = +1
Query: 37 SSALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFRTTV*LAH 216
S + S S +H + RS R P+ + RRSR Q R+P + R+
Sbjct: 214 SRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRS-----RS----PR 264
Query: 217 QVKGRTGLQQGLEGRLRVRAATAQRLRQESPGQRSETRTARPRR 348
K + + R R+ + + R SP +R +++ PRR
Sbjct: 265 SSKRYRSSRSHRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRR 308
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 330 NGKAKEAL---EQSRQNIERTAEELRKAHPDVEK 422
NGKA E + E+ IE E++RKA+ ++EK
Sbjct: 1930 NGKATEMVKKNEEKNNEIEEMREKMRKANEEIEK 1963
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 324 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESHKLA 494
D K + +E+ +Q+ +E VE+N +EK AVQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMA 608
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 300 RVSRAALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALREKLQAAVQNTV 473
RV G GK KE +Q + +L K A D+EK L EK+ A + V
Sbjct: 287 RVKGVLTGACRGKEKEIQDQELGTKDERDYQLEKRASDDLEKRLKKLEEKIDALFKGGV 345
>SB_4910| Best HMM Match : HECT (HMM E-Value=5.8e-33)
Length = 958
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 330 SRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNCCSKVLWNSL 172
S L + W L + + C + D PS L +C D +SE + C K LW +L
Sbjct: 420 SALSLITWNELERGI-CGNPDVSPS--VLKSACKYGDDLSESSECIKFLWAAL 469
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 339 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESHK 488
A++ + ++ ER AEE R+ + E+ A R++ + A SH+
Sbjct: 434 AEDEARRQQEEAEREAEEARRQQEEAEREAEEARQQQEDAEDEYETVSHE 483
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 306 SRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVE---KNATALREKLQA 455
+++ DA AK E +Q IER E+LRKA + ++ AL+ K+ A
Sbjct: 1019 AKSGSSDALAAAKAREENLKQQIERLNEDLRKAKEEFTPEMRHFDALQSKIAA 1071
>SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011)
Length = 270
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 303 VSRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 470
V+ ALGD + EAL + + T E LR H + ALR+ + A++NT
Sbjct: 5 VTHEALGDTH----EALRDTHDALRDTHEALRDTHEALRDTHEALRD-IHEALRNT 55
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 34 ISSALSLSTAHHGRQVRSSLRLHRSGPRSDGAT--RRSRLLQGHRTPHQG 177
I ++LS+ST+ +SSL H S T +SR+ HR P +G
Sbjct: 1934 IDNSLSVSTSRSPAMHKSSLHNHHSSATKPKLTIPTKSRVKSYHRPPSKG 1983
>SB_19070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 7 LLXCCSPVRISSALSLSTAHH 69
LL CCSP+ S A+ +S + H
Sbjct: 11 LLLCCSPISSSQAIHVSDSRH 31
>SB_13066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 318 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 455
LG ++G E +E+ + I T +RK+ PD + L E L+A
Sbjct: 568 LGASDG---ENVEEDSKEIHLTCHSMRKSPPDTHTTSVELIESLEA 610
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 387 RPCARCSASTVPKPPWPCRSRLRALP 310
+ C C P PP PC+ R+ LP
Sbjct: 121 KSCFSCRRRQQPPPPPPCQQRMADLP 146
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 381 CARCSASTVPKPPWPCRSRLRALPW 307
C R ST P PP P RS +R L W
Sbjct: 1485 CIRGFVSTDPPPP-PLRSTVRCLTW 1508
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 351 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESHKL 491
LE + + R A E R DVE+ + +RE V+NT E ++
Sbjct: 714 LETQMEILTRQASEYRGKLVDVEEKPSRVREVHSELVENTFAEEAQI 760
>SB_39744| Best HMM Match : Sybindin (HMM E-Value=3.6)
Length = 211
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 191 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 286
L Q LTK +D+S+AW G E +LQ++
Sbjct: 125 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKM 155
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 162 SMSLKKSGASRRTIAPWARAMQAKRTTNLAAMMCCRETE 46
S+S K+ SR PWA + T NLA+ + TE
Sbjct: 2407 SLSASKAVTSRPFQFPWAMTIDEGATLNLASKLMITSTE 2445
>SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 191 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 286
L Q LTK +D+S+AW G E +LQ++
Sbjct: 304 LAQASTKLTKRLTTKDWSRAWSSG-ELILQKM 334
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,689,909
Number of Sequences: 59808
Number of extensions: 237524
Number of successful extensions: 1138
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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