Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_A18
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 38 0.009
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 35 0.064
05_07_0365 - 29662703-29662710,29664321-29664378,29664675-296647... 31 0.79
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 31 1.0
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 30 1.4
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 30 1.8
04_01_0516 + 6772617-6773042 29 2.4
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 4.2
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 28 5.6
09_04_0733 - 19791745-19791906,19792072-19792173,19792246-197923... 28 5.6
05_04_0223 - 19192411-19192951,19193363-19193388 28 5.6
11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 28 7.4
05_01_0567 - 4967373-4967675,4968023-4968083,4968217-4968284,496... 28 7.4
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 28 7.4
03_02_0028 - 5118621-5119448 28 7.4
12_02_0414 + 18824347-18825161,18826018-18828229 27 9.7
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 329 CVGCGGQI-HDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVXDGKTYCKXXYTTLF 505
C GC I H +++ + D WH C +C C + + E D + Y K Y F
Sbjct: 257 CAGCKNPIGHGRFLSCM--DSVWHPQCFRCFACNKPISEYEFAMHED-QPYHKSCYKDFF 313
Query: 506 GTKCDKC 526
KCD C
Sbjct: 314 HPKCDVC 320
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 329 CVGCGGQI-HDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVXDGKTYCKXXYTTLF 505
C GC +I H +++ + WH C +C C Q + + + Y K Y F
Sbjct: 558 CAGCHSEIGHGRFLSCMGA--VWHPECFRCHACNQPIYD-YEFSMSGNHPYHKTCYKERF 614
Query: 506 GTKCDKC 526
KCD C
Sbjct: 615 HPKCDVC 621
>05_07_0365 -
29662703-29662710,29664321-29664378,29664675-29664732,
29665029-29665086,29665737-29665794,29666091-29666134,
29666445-29666502,29666799-29666981,29667154-29667211,
29667508-29667565,29667862-29667919,29668216-29668259,
29668570-29668627,29668924-29669106,29669279-29669336,
29669633-29669676,29669987-29670044,29670341-29670398,
29670696-29670753,29671050-29671052
Length = 420
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 261 TITISWTLHLTLK*CQKSSGSRCASAAEVRS-TTSTSSGWPLTWS 392
T SW + TL+ +RC A ++R T +T++ WP+ W+
Sbjct: 147 TTAASWPMLWTLRYSMFRRTNRCFVAYDIRRFTETTAASWPMLWT 191
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 261 TITISWTLHLTLK*CQKSSGSRCASAAEVRS-TTSTSSGWPLTWS 392
T SW + TL+ +RC A ++R T +T++ WP+ W+
Sbjct: 300 TTAASWPMLWTLRYSMFRRTNRCFVAYDIRRFTETTAASWPMLWT 344
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 392 WHAACLKCQECRQFLDESCTCFVXDGKTYCKXXYTTLF 505
+H +C KCQ C+ L + +G YCK + LF
Sbjct: 29 FHRSCFKCQHCKSTLSLGNYSSI-EGVPYCKPHFEQLF 65
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 326 LCVGCGGQI-HDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFV 460
+C GC +I H Y+ + + WH C +C CR + E F+
Sbjct: 113 VCGGCKHEIGHGHYLSCLG--MYWHPQCFRCSSCRHPIREMEVTFL 156
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 512 KCDKCGAXFSKNDFVMRAKTNIYHIDCFXCCACARQLIP 628
+C++C F D + + I+ + + CC C R+ IP
Sbjct: 1562 RCERCKKWFH-GDALQLEEEKIFELVSYRCCRCRRRAIP 1599
>04_01_0516 + 6772617-6773042
Length = 141
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -3
Query: 371 GGCTGRGSDLRSRRTTRAGAFLASFQREMKCP*YCDGASCRVGTVSALHHRRWPSPSLTT 192
GG G D+ + + G+ +A+ R A R T + RRWPS + TT
Sbjct: 50 GGRPTDGDDVEEKAAEKIGSTVATVLRRSSA-----AAKGRTRTATTWRSRRWPSRATTT 104
Query: 191 T 189
T
Sbjct: 105 T 105
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 512 KCDKCGAXFSKNDFVMRAKTNIYHIDCFXCCACARQL 622
KCD CG + + A +YH CF C C L
Sbjct: 12 KCDSCGRTVYPVE-ELAADGRVYHRPCFRCTHCKATL 47
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -2
Query: 345 PPQPTHNESRSFFGIIST*DEVSMIL*WCIMSGGDCISPPPPPLAITITDDHTEPTFEVS 166
PPQP H R G + E+ + SPPPPPL I ++ E T V+
Sbjct: 77 PPQPEHEREREHLGEPPSLPELLEEAPSQAETLDTPPSPPPPPLEDDIPEEEEEGTGTVA 136
Query: 165 RKT 157
+
Sbjct: 137 NNS 139
>09_04_0733 -
19791745-19791906,19792072-19792173,19792246-19792331,
19792655-19792926,19793430-19793521,19793615-19793730,
19794206-19794389,19794467-19794599,19794981-19795075
Length = 413
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 83 PKDIXNLASQYYWCLSNVVTRQSD 154
P+D+ N+ + YWCLS + D
Sbjct: 250 PQDVSNIEADCYWCLSKFLDGMQD 273
>05_04_0223 - 19192411-19192951,19193363-19193388
Length = 188
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 315 SGSRCASAAEVRSTTSTSSGWPLTWSGTRPA*SVRNAGS 431
+GS + + S+S+ W W G RPA R G+
Sbjct: 129 AGSARPTGWNAAAAPSSSASWTARWQGRRPAPRARRGGT 167
>11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395
Length = 794
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -2
Query: 237 ISPPPPPLAITITD 196
+SPPPPP+A TI++
Sbjct: 411 VSPPPPPMAATISE 424
>05_01_0567 -
4967373-4967675,4968023-4968083,4968217-4968284,
4968390-4968425,4968553-4968726,4968983-4969023,
4969138-4969187,4969300-4969388,4969490-4969564,
4969684-4969772,4971320-4971434
Length = 366
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 199 SDGDGQRRWWR 231
SDG GQR+WWR
Sbjct: 17 SDGGGQRQWWR 27
>04_01_0399 -
5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 252 SGGDCISPPPPPLAITITDD 193
+GG PPPPP+ + + DD
Sbjct: 86 AGGAAPKPPPPPVKVEVLDD 105
>03_02_0028 - 5118621-5119448
Length = 275
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 401 PRATPSQGPPGGCTG--RGSDLRSRRTTRAGAFLASFQ 294
PR P Q PPG C DL R T A +L S Q
Sbjct: 43 PRRRPQQPPPGACAAGYAADDLTPARGTPAYRWLKSSQ 80
>12_02_0414 + 18824347-18825161,18826018-18828229
Length = 1008
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 242 SPPDMMHHHN-IMDTSSHVEMMPKKLRLSLCVGCGG 346
+P + HH + ++D HV+ PK+LR+ VG G
Sbjct: 154 APVGIQHHKDDLIDLLQHVDGQPKQLRVISIVGFRG 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,401,595
Number of Sequences: 37544
Number of extensions: 408540
Number of successful extensions: 1922
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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