Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_A18
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.68 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.6  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   2.1  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.8  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.8  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   4.8  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   4.8  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   4.8  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   4.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   4.8  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.3  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 449 CRIRRGTAGIPDTLGRPRATPSQGPPG 369
           C + +G  G+P   GRP  T   GPPG
Sbjct: 542 CPVVKGEKGLP---GRPGKTGRDGPPG 565



 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 437 RGTAGIPDTLGRPRATPSQGPPG 369
           RG  G+P +LG P      G PG
Sbjct: 127 RGDPGLPGSLGYPGEKGDLGTPG 149


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = -2

Query: 243 DCISPPPPPLAITITDDH---TEPTFEVSRKTTSLC 145
           + I PPP P  +T+ D     T+PT E     +  C
Sbjct: 752 ESIPPPPKPPTVTMMDMQQLDTQPTLEFKELVSQKC 787


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT  ++   T+    TT
Sbjct: 244 PPPPPTTTTTTVWTDPTTTITTDYTTAYPPTT 275


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 244 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 275


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 244 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 275


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 243 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 274


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 243 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 274


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 244 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 275


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 244 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 275


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 312 SSGSRCASAAEVRSTTSTSSGWPLTWSGTRPA*SVRNAGSSSTNPARASLXTERLIAK 485
           SSG+  AS+   R    TS G  +T + T P  S  +   + +NP  +S     ++++
Sbjct: 488 SSGNWSASSESGR----TSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSR 541


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 312 SSGSRCASAAEVRSTTSTSSGWPLTWSGTRPA*SVRNAGSSSTNPARASLXTERLIAK 485
           SSG+  AS+   R    TS G  +T + T P  S  +   + +NP  +S     ++++
Sbjct: 489 SSGNWSASSESGR----TSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSR 542


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 228 PPPPLAITITDDHTEPTFEVSRKTTSLCRVTT 133
           PPPP   T T   T+PT   +   T+    TT
Sbjct: 244 PPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTT 275


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 384  SGATRRMYWSWI*PPQPTHNESRSFFGI 301
            +G T   Y  W+ PP P    + +F GI
Sbjct: 1937 TGVTIAEYGHWVAPPSPMVRANITFGGI 1964


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,306
Number of Sequences: 2352
Number of extensions: 13707
Number of successful extensions: 62
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)