Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_A13
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 69 4e-12
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 52 4e-07
03_02_0592 - 9687700-9687933,9688515-9688591,9688891-9688999,968... 50 2e-06
10_08_0724 + 20114796-20115506 46 2e-05
01_07_0183 + 41840089-41840394,41840869-41841249 46 3e-05
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 44 1e-04
10_08_0692 + 19918746-19919072,19919419-19919781,19919841-199199... 43 2e-04
10_08_0700 + 19969616-19969942,19970044-19970422,19970562-19970665 42 6e-04
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 41 0.001
03_05_0204 - 21961332-21961715,21962030-21962374 40 0.001
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 40 0.002
01_07_0184 + 41846416-41847132 39 0.003
01_07_0182 + 41838805-41839152,41839230-41839610 39 0.004
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 38 0.007
03_02_0591 - 9682476-9682487,9682805-9682885,9683085-9683192,968... 36 0.021
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 35 0.065
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 34 0.085
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 301 CPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINV 480
CP+ +R +LT+ K++PYD+ ++L KP+W SP+G VP ++ E + + DS++I
Sbjct: 80 CPFTQRVLLTIEEKHLPYDIKLVDLANKPDWFLKISPEGKVPIVKLEE-QWVADSDVITQ 138
Query: 481 YLDEKYPXIPLQASDP 528
++EKYP P A+ P
Sbjct: 139 AIEEKYPE-PSLATPP 153
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 304 PYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 480
P+ R + L K +PY+L ++ K E + +P VP L + A+ +S +I
Sbjct: 17 PFVHRVEVALRLKGVPYELILEDMGNKSELLLAHNPVHKMVPVLLHGDRSAICESLVIVE 76
Query: 481 YLDEKYPXIPLQASDPLRRAQXKILV 558
Y+DE + PL +DPLRRA + V
Sbjct: 77 YVDEAFDGPPLLPADPLRRAMARFWV 102
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +1
Query: 307 YAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYL 486
Y R + L K + Y+L +L K + + N +P + + ++L +S +I Y+
Sbjct: 290 YGHRAEVALRLKGVRYELILEDLRNKSDLLLNHNPVHKLVPVLLHGDRSLSESLVILEYI 349
Query: 487 DEKYPXIPLQASDPLRRA 540
DE + P+ +DP RA
Sbjct: 350 DESFHGPPILPTDPYDRA 367
>03_02_0592 -
9687700-9687933,9688515-9688591,9688891-9688999,
9689162-9689260,9689368-9689454,9689570-9689630,
9689739-9689813,9689936-9689961
Length = 255
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Frame = +1
Query: 259 PP--YSGKLRVFAMRFCPYAERTVLTLNAKNI--PYDLXFINLXQKPEWI-FNFSPKGTV 423
PP + G R++ FCP+A+R + N K + +L I+L KP W +GTV
Sbjct: 25 PPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTV 84
Query: 424 PALEYEPGKALFDSNIINVYLDEKYPXIPLQASDPLRRAQXKILVESFAPAQSAYYTAAF 603
P+LE+ GK + +S + Y+D + L DP +R L+ A Y+
Sbjct: 85 PSLEHN-GKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLI 143
Query: 604 NAQALQPSMVETYHK 648
+ L V K
Sbjct: 144 SKADLSAETVAALDK 158
>10_08_0724 + 20114796-20115506
Length = 236
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Frame = +1
Query: 268 SGKLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEP 444
SG+L++ + PYA R + LN K++PY+ NL K + + +P +VP L
Sbjct: 4 SGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVL-LHA 62
Query: 445 GKALFDSNIINVYLDEKYP-----XIPLQASDPLRRA 540
G+ + +S +I Y+DE +P + SDP RA
Sbjct: 63 GRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERA 99
>01_07_0183 + 41840089-41840394,41840869-41841249
Length = 228
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 304 PYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 480
P+ R L K + Y+L +L K + + +P VP L + G+++ +S ++
Sbjct: 11 PFGHRAEAALRLKGVQYELLLEDLRSKSDLLLAHNPVHKLVPVLLHSDGRSVAESLVVVQ 70
Query: 481 YLDEKYPXIPLQASDPLRRAQXK 549
Y+D+ + PL +DP RAQ +
Sbjct: 71 YVDDAFHGPPLLPADPYARAQAR 93
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 301 CPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINV 480
CP+++R +LTL K + + P+ SP+G VP GK + DS++I
Sbjct: 20 CPFSQRVLLTLEEKKMFSAASGVETV--PQLFLKISPEGKVPVFNGGDGKWIPDSDVITQ 77
Query: 481 YLDEKYP 501
++EKYP
Sbjct: 78 VIEEKYP 84
>10_08_0692 +
19918746-19919072,19919419-19919781,19919841-19919977,
19920298-19920304
Length = 277
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 274 KLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEPGK 450
+L++ M P+A R L L+ K + YD + K E + + +P VP L + GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYDYVEEDFKNKSELLLSSNPVHKKVPVLIHN-GK 65
Query: 451 ALFDSNIINVYLDEKYP--XIPLQASDPLRRA 540
+ +S +I Y+DE +P + L +DP RA
Sbjct: 66 PICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>10_08_0700 + 19969616-19969942,19970044-19970422,19970562-19970665
Length = 269
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 274 KLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEPGK 450
+L++ M P+A R L L+ K + YD + K + + + +P VP L ++ GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYDYVEEDFKNKSDVLLSSNPVHKKVPVLIHK-GK 65
Query: 451 ALFDSNIINVYLDEKYP--XIPLQASDPLRRA 540
+ +S +I Y+DE +P + L +DP RA
Sbjct: 66 PICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Frame = +1
Query: 274 KLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINL---XQKPEWIFNFSPKGTVPALEYEP 444
KLRV+ M R LN K + +DL ++L K +P G +P L+ +
Sbjct: 7 KLRVYGMALSANVVRVATVLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQ-DG 65
Query: 445 GKALFDSNIINVYLDEKY-----PXIPLQASDPLRRAQXKILVESFAPAQS 582
+ L++S IN Y+ KY +P +AS ++ F PA S
Sbjct: 66 DEVLYESRAINRYIATKYKAEGADLLPAEASPAKLEVWLEVESHHFYPAIS 116
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +1
Query: 304 PYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 480
P+ R + L K + Y+ +L K + + +P VP L + +A+ +S +I
Sbjct: 14 PFVHRAEVALRLKGVAYEFIHEDLNNKSDLLLAKNPIHKKVPVLLHGD-RAVCESLVIVE 72
Query: 481 YLDEKYPXIPLQASDPLRRAQXKILVESFAPAQSAYYTAAFNAQALQPS 627
Y+DE + PL +DP RA + F ++ + +F + + +PS
Sbjct: 73 YIDEAFNGPPLLPADPYHRAMARFWAH-FIDHKAIFSCHSFKSYSTRPS 120
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +1
Query: 247 GDVLPPYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNF---SPKG 417
G P KL F C Y R L+L K + Y+ INL + F +P
Sbjct: 18 GAAAPERRLKLYSFWRSSCSYRVRIALSL--KGLDYEYKPINLLANEQSHPEFEKLNPMK 75
Query: 418 TVPALEYEPGKALFDSNIINVYLDEKYPXIPLQASDPLRRA 540
VPAL + DS I +YL++ YP PL DP +A
Sbjct: 76 YVPALVDGDDTVVVDSFAILLYLEDTYPQHPLLPQDPKMKA 116
>01_07_0184 + 41846416-41847132
Length = 238
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +1
Query: 262 PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPAL-- 432
P ++V PY++R L K +PY+L +L K + + +P VP L
Sbjct: 4 PAPAPVKVIGTFDSPYSQRAEAALRLKGVPYELILEDLRNKSDLLLTHNPIHKKVPVLLH 63
Query: 433 -EYEPGKALFDSNIINVYLDEKYP-XIPLQASDPLRRA 540
+ + A+ +S +I Y+DE +P + L +DP RA
Sbjct: 64 GDDDHRAAVCESLVIVEYVDEAFPAPLLLLPADPGLRA 101
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 304 PYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 480
P+ R L K + Y+L +L K + +P VP L + G+A+ +S +I
Sbjct: 14 PFVHRVEAALQLKGVAYELIHEDLENKSNLLLASNPVHKKVPVL-LDGGRAICESLVIVE 72
Query: 481 YLDEKYPXIPLQASDPLRRA 540
Y+D+ + P+ +DP RA
Sbjct: 73 YVDDAFDGPPILPADPYDRA 92
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 274 KLRVFAMRFCPYAERTVLTLNAKNIPYDLXFINLXQ----KPEWIFNFSPKGTVPALEYE 441
KL +++ + R + LN K + Y+ +NL + PE++ +P VPAL +
Sbjct: 13 KLGLYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFM-KVNPMKFVPAL-VD 70
Query: 442 PGKALFDSNIINVYLDEKYPXIPLQASD 525
+ DS I +YL++KYP PL D
Sbjct: 71 GDAVIGDSYAIALYLEDKYPEHPLLPQD 98
>03_02_0591 -
9682476-9682487,9682805-9682885,9683085-9683192,
9683307-9683383,9683495-9683603,9683696-9683794,
9684208-9684294,9684454-9684514,9684646-9684720,
9684826-9684854
Length = 245
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 259 PPYSGKLRVFAMRFCPYAERTVLTLNAKNI--PYDLXFINLXQKPEWI-FNFSPKGTVPA 429
P + G R++ CPYA+R + N K + + I+L +P W P+ VP+
Sbjct: 28 PLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPS 87
Query: 430 LEY 438
LE+
Sbjct: 88 LEH 90
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 34.7 bits (76), Expect = 0.065
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 310 AERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLD 489
+ R + LN K + Y+ +N P++ +P +PAL + + DS I +YL+
Sbjct: 17 SHRIRIVLNLKGVDYEYKSVNPRTDPDYE-KINPIKYIPAL-VDGDLVVSDSLAIALYLE 74
Query: 490 EKYPXIPLQASDPLRRA 540
+KYP L D ++A
Sbjct: 75 DKYPQHALLPKDLKKKA 91
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 34.3 bits (75), Expect = 0.085
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +1
Query: 292 MRFCPYAERTVLTLNAKNIPYDLXFINLXQKPEWIFNFSPKGTVPALEYEPGKALFDSNI 471
M C Y R + LN K I Y+ + P++ +P VPAL + + DS
Sbjct: 16 MSSCSYRVR--IALNLKGIDYEYRAVTRGD-PDY-GKINPIKYVPAL-VDGDFTISDSLA 70
Query: 472 INVYLDEKYPXIPLQASDPLRRA 540
I +YL++KYP PL D ++A
Sbjct: 71 IILYLEDKYPQHPLLPQDLKKKA 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,371,216
Number of Sequences: 37544
Number of extensions: 244511
Number of successful extensions: 477
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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