Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_A05
         (536 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-2|AAA82422.1|  124|Caenorhabditis elegans Ribosomal prote...   148   3e-36
AC006708-12|AAT81173.1|  908|Caenorhabditis elegans Hypothetical...    29   2.1  
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical...    29   2.1  
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    28   3.7  
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    28   3.7  
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    28   3.7  
Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical pr...    27   6.5  

>U41264-2|AAA82422.1|  124|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 33 protein.
          Length = 124

 Score =  148 bits (358), Expect = 3e-36
 Identities = 70/121 (57%), Positives = 88/121 (72%)
 Frame = +1

Query: 145 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYR 324
           V R+ S P  GRLY KA+FTG+KRGLR Q E+T+LLK+EG  ++ DA FYAGK  VY+Y+
Sbjct: 6   VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65

Query: 325 AXKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHXIRVMLYPSR 504
           A  +T   G      T+ RAIWGK+TRPHGN+G+VRAKF  N+P  A+G  IRV+LYPS 
Sbjct: 66  AHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSN 123

Query: 505 I 507
           I
Sbjct: 124 I 124


>AC006708-12|AAT81173.1|  908|Caenorhabditis elegans Hypothetical
           protein Y110A7A.9b protein.
          Length = 908

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 447 RLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLXSSV-HIDAMLASI 292
           ++ L   T   + W GHLA ++ Q+   A  +  NW  +  +    DA+LA +
Sbjct: 839 KMGLDDPTEVESKWIGHLADEAKQIRVLAEASRRNWPDVVEATSSADAILARL 891


>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
            protein Y110A7A.9a protein.
          Length = 1019

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 447  RLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLXSSV-HIDAMLASI 292
            ++ L   T   + W GHLA ++ Q+   A  +  NW  +  +    DA+LA +
Sbjct: 950  KMGLDDPTEVESKWIGHLADEAKQIRVLAEASRRNWPDVVEATSSADAILARL 1002


>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 226 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAXKRTPIPGGPRGKKTK 375
           N  E     KVE AKD+        KHCV  ++A    P+   P   K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQA---RPLSDRPENLKAK 580


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 226 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAXKRTPIPGGPRGKKTK 375
           N  E     KVE AKD+        KHCV  ++A    P+   P   K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQA---RPLSDRPENLKAK 580


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 226 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAXKRTPIPGGPRGKKTK 375
           N  E     KVE AKD+        KHCV  ++A    P+   P   K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQA---RPLSDRPENLKAK 580


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 226 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAXKRTPIPGGPRGKKTK 375
           N  E     KVE AKD+        KHCV  ++A    P+   P   K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQA---RPLSDRPENLKAK 580


>Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical
           protein F17C8.2 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 506 ILEGYSITRIXCPIAWAGRLDLNLARTLPELP 411
           +L+G S+ RI    AW   +D+ +  T P  P
Sbjct: 38  VLDGVSVFRIETDAAWTDMMDIQITVTPPSKP 69


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 226 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAXKRTPIPGGPRGKKTK 375
           N  E     KVE AKD+        KHCV  ++A    P+   P   K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQA---RPLSDRPENLKAK 580


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 226 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAXKRTPIPGGPRGKKTK 375
           N  E     KVE AKD+        KHCV  ++A    P+   P   K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQA---RPLSDRPENLKAK 580


>Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical
           protein F58A4.1 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 26/82 (31%), Positives = 33/82 (40%)
 Frame = +2

Query: 158 HQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIASMCTELXRG 337
           H SP+T+  T    S   S   +TST TP +   +   T    S   +S  S  T     
Sbjct: 94  HSSPSTSTSTSTSTSTSTSTSRSTSTVTPTT---RSSTTTTATSTPTSS--SKATTTSAQ 148

Query: 338 HQFPEVPVAKKPSCVLSGAR*P 403
              PE+P A  P  VL G   P
Sbjct: 149 ITQPEIPQA-APGTVLKGEEFP 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,163,481
Number of Sequences: 27780
Number of extensions: 226333
Number of successful extensions: 472
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)