Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P24
(1109 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 135 5e-32
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 59 5e-09
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 54 2e-07
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 46 4e-05
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 43 4e-04
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 42 0.001
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 41 0.002
05_03_0244 + 10857139-10857516 29 5.0
01_04_0132 + 16469922-16470145,16472720-16472793,16473613-164737... 29 5.0
11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532... 29 8.7
>05_03_0633 + 16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 135 bits (327), Expect = 5e-32
Identities = 86/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Frame = +2
Query: 386 ILKKGD-LAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAADVXXXXXXXXXXXXXXXKPG 562
I +KGD + D+G HIDGFIAVVAHT V+ + V+G+AADV +PG
Sbjct: 51 ICEKGDSYIRDDMGCHIDGFIAVVAHTHVIHDGAVTGKAADVLAAANTAAEVALRLVRPG 110
Query: 563 TENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEK 742
+N VTEAIQK++A Y CK +EG+LSHQLKQF IDG K ++ + S A K + A E+
Sbjct: 111 KKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNK-VVLSVSNADTKV-DDAEFEE 168
Query: 743 YEVYAMDVLISTGEAVGREMDTR-CTIYKK-TDEVYQXETKGFQNVL**GX*QTWQHAIQ 916
EVYA+D++ STGE + +D + TIYK+ D+ Y + K + + Q +
Sbjct: 169 NEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIF-SEISQKFPIMPF 227
Query: 917 SAQFX*XDKCRLGVVECITTNXLXHPGPL 1003
+A+ + RLG+VEC+ + L P P+
Sbjct: 228 TARALEEKRARLGLVECM-NHELLQPYPV 255
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 116 EKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEE 268
E ++ VVTKYK A I+N L+ V++ C P A +ICE GD + ++
Sbjct: 12 ELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDD 62
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 59.3 bits (137), Expect = 5e-09
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Frame = +2
Query: 161 AGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVN 340
A ++ +V + + + P ++CE LE + KE + GIAF T S+N
Sbjct: 246 AAEVHRQVRKHMRSILKPGMLMIDLCE-----TLENMVRKLIKENGLQAGIAFPTGCSLN 300
Query: 341 NCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGE--SEVSGRAADVXX 514
H++P + + +L+ D+ K+D G HIDG+I A TV + + D
Sbjct: 301 WVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDGYIVDCAFTVAFNPMFDSLLQASKDATN 359
Query: 515 XXXXXXXXXXXXXKPGTENYAVTEAIQ-KISAE-YGCKPIEGMLSHQLKQFRIDGEKSII 688
G V E+ + +I+ + + K + + H + ++I KS+
Sbjct: 360 TGVKEAGIDARLCDVGAAIQEVMESYEVEINGKVFQIKSVRNLNGHSIGPYQIHAGKSV- 418
Query: 689 QNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGREMDTRCTIYKKTDEV 841
P K E+ +E+ E YA++ STG+ RE D C+ Y K +V
Sbjct: 419 --PIV---KGGEQTKMEEGEFYAIETFGSTGKGFVRE-DLECSHYMKNFDV 463
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 54.0 bits (124), Expect = 2e-07
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 4/198 (2%)
Frame = +2
Query: 260 LEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDG 439
LE + KE + GIAF T S+N H++P + +L+ D+ K+D G HI+G
Sbjct: 218 LENMVRKLIKENGLEAGIAFPTGCSLNCVAAHWTPNGGDKT-VLQYDDVMKLDFGTHING 276
Query: 440 FIAVVAHTVVVGE--SEVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQ-KISAE 610
+I A TV + + D G V E+ + +I+ +
Sbjct: 277 YIVDSAFTVAFNPMFDPLLQASRDATNAGVKEAGIDARLCDVGAAIQEVMESYEVEINGK 336
Query: 611 -YGCKPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEA 787
+ K + + H + ++I KS+ K E+ +E+ E YA++ STG+
Sbjct: 337 VFQVKSVRNLNGHGIGPYQIHFGKSV------PVVKGGEQTKMEEGEFYAIETFGSTGKG 390
Query: 788 VGREMDTRCTIYKKTDEV 841
RE D C+ Y K +V
Sbjct: 391 YVRE-DLECSHYMKNFDV 407
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 46.4 bits (105), Expect = 4e-05
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = +2
Query: 98 ADEKXVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 277
A E E + + + + K A ++ RVLE P + EI + K++++
Sbjct: 128 ASEIASEIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAY 187
Query: 278 VFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVA 457
G S C SVN CICH P + E L+ GD+ ID+ +++G+ +
Sbjct: 188 ---PSPLGYGGFPKSVCTSVNECICHGIPDSRE----LQDGDIINIDVTVYLNGYHGDTS 240
Query: 458 HTVVVGE-SEVSGRAADV 508
T + GE E S R V
Sbjct: 241 KTFLCGEVDEASKRLVKV 258
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 308 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 487
G S C SVN CICH P +L+ GD+ ID+ +++G+ + T + GE +
Sbjct: 465 GFPKSVCTSVNECICHGIP----DSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCGEVDE 520
Query: 488 S 490
S
Sbjct: 521 S 521
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 308 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 487
G S C S+N C+CH P +++ L+ GD+ +D+ ++G+ + T V GE +
Sbjct: 154 GFPKSICTSLNECVCHGVPDSTQ----LQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDD 209
Query: 488 SGR 496
S R
Sbjct: 210 SIR 212
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/117 (25%), Positives = 48/117 (41%)
Frame = +2
Query: 308 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 487
G S C SVN CICH P S P L+ GD+ ID+ +++G+ + T + G V
Sbjct: 161 GFPKSVCTSVNECICHGIP-DSRP---LEDGDIINIDVTVYLNGYHGDTSATFLCG--NV 214
Query: 488 SGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQ 658
+A + PG E + IQ + ++ + + H + Q
Sbjct: 215 DDKAKKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQ 271
>05_03_0244 + 10857139-10857516
Length = 125
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 834 SVFLYI-VHLVSISRPTASPVDIRTSIAYTSYFSSVAFSCSLRCASDGFCIILFSPSIRN 658
+VFL++ V LV +S ASP + + SS +SCS + A+ C+ + SP
Sbjct: 5 TVFLFLLVALVVVSAAEASPEPLPARRSRFLLTSSSFYSCSKKSAA-AVCLAVGSPGATC 63
Query: 657 CFSWC 643
C C
Sbjct: 64 CGGRC 68
>01_04_0132 + 16469922-16470145,16472720-16472793,16473613-16473755,
16474076-16474187,16475235-16475350,16475448-16475594
Length = 271
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 1026 ATNFLDXHRGPGWXNXFVVMHSTTPNLHLSXYXNCAD 916
A FLD RG W + V PN+H+ + D
Sbjct: 180 AAEFLDVFRGISWNHHLAVPSCVMPNIHVYGFSKAED 216
>11_01_0657 +
5322295-5323367,5323436-5323555,5323743-5323791,
5323968-5324084,5324200-5324268,5324394-5324488,
5325183-5325521,5327043-5327084,5327814-5327907,
5328121-5328190,5328719-5329677
Length = 1008
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 705 HSVKNMKKQHLKSMKCMLWMF*YPLVKQLDVKWTPDVQYTKKLMRCTXLKLKASRM-XYS 881
H KN+ ++ M L K L+V D+ YTK+ +RC + + M
Sbjct: 619 HGRKNISAKYSGPMGVWFVACARQLAKALEVPLVNDLGYTKRYVRCLQIAEVVNCMKDLI 678
Query: 882 EVRNKHGNMPF-NLRSXDKXTSAG 950
+ ++G+ P +L S + TS+G
Sbjct: 679 DYSRQNGSGPIASLHSFPRRTSSG 702
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,750,240
Number of Sequences: 37544
Number of extensions: 526937
Number of successful extensions: 1204
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3339678056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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