Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P24
(1109 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 258 4e-69
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 69 8e-12
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 41 0.002
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 2.6
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 2.6
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 2.6
Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 29 4.5
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 29 4.5
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical ... 29 5.9
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 258 bits (633), Expect = 4e-69
Identities = 121/250 (48%), Positives = 173/250 (69%), Gaps = 4/250 (1%)
Frame = +2
Query: 122 TIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDS 301
T+A D VVTKY++A +I N VL++V+A A A ++C+ GDKL+LE+T K++KKEK+
Sbjct: 22 TLANDAVVTKYQVAAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNF 81
Query: 302 KKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG-- 475
KGIA TC+S++NCICH++P+ SE +LK G + K+DLG HIDG IA AHTVVVG
Sbjct: 82 TKGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGAS 141
Query: 476 -ESEVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQL 652
+++V+G+ AD+ +P TEN +T+ I K +AE+G PIE MLSHQL
Sbjct: 142 KDNKVTGKLADLLRGTHDALEIAIRSLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQL 201
Query: 653 KQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGREMDTRCTIYKKT 832
++ IDGEK IIQN E Q+ E EK ++K+E YA+D+L STG+ ++MDTR T+++K
Sbjct: 202 ERNEIDGEKKIIQNSGEKQKGEIEKIKIDKHEAYAIDILFSTGKGQPKDMDTRTTVFRKN 261
Query: 833 DEV-YQXETK 859
++V YQ + K
Sbjct: 262 EQVSYQLKMK 271
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 849 LKLKASRMXYSEVRNKHGNMPFNLRSXDKXTSA 947
LK+KASR+ +S+V HG MPF+LRS ++ A
Sbjct: 268 LKMKASRVFFSDVNKVHGPMPFSLRSFEEEVKA 300
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 68.5 bits (160), Expect = 8e-12
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 5/242 (2%)
Frame = +2
Query: 98 ADEKXVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 277
++E+ I+ + V Y+ + + +V + V + P + EICE LE T++
Sbjct: 115 SNEEKKALDISYEEVWQDYRRSAEAHRQVRKYVKSWIKPGMTMIEICER-----LETTSR 169
Query: 278 VFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVA 457
KE+ + G+AF T S+N+C H++P A + +L+ GD+ KID G H+ G + A
Sbjct: 170 RLIKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRGRLIDSA 228
Query: 458 HTVVVGES----EVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKP 625
TV + R A E + ++ Y KP
Sbjct: 229 FTVHFDPKFDPLVEAVREATNAGIKESGIDVRLCDVGEIVEEVMTSHEVELDGKSYVVKP 288
Query: 626 IEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEA-VGREM 802
I + H + Q+RI K++ P K E+ +E+ E+YA++ STG+ V +M
Sbjct: 289 IRNLNGHSIAQYRIHAGKTV---PIV---KGGEQTKMEENEIYAIETFGSTGKGYVHDDM 342
Query: 803 DT 808
+T
Sbjct: 343 ET 344
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/109 (26%), Positives = 45/109 (41%)
Frame = +2
Query: 320 STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRA 499
S C SVN ICH P + L+ GDL +D+ + GF + T +VG+ +V +
Sbjct: 173 SCCTSVNEVICHGIPDMRK----LENGDLCNVDVTVYHRGFHGDLNETFLVGD-KVDEES 227
Query: 500 ADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSH 646
+ KPG + + IQK + G ++G H
Sbjct: 228 RKLVKVTFECLQQAIAIVKPGVKFREIGNVIQKHANANGFSVVKGYCGH 276
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 294 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 157
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 294 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 157
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 294 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 157
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 400 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 442
>Z81086-5|CAB03119.2| 182|Caenorhabditis elegans Hypothetical
protein F53B6.5 protein.
Length = 182
Score = 29.5 bits (63), Expect = 4.5
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 620 KPIEGMLSHQLKQFRIDGEKSIIQNPSEAQRKEHEKATLEKYEVYAMDVLISTGEAVGRE 799
KPI + + Q RI EK++ P K E+A +E+ E+YA++ STG+ +
Sbjct: 38 KPIGSLNGQSIAQCRIHTEKTV---PIV---KGGEQARMEENEIYAIETFGSTGKGYFHD 91
Query: 800 MDTRCTIYKKTDEV 841
D + Y K E+
Sbjct: 92 -DMETSHYMKNFEL 104
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 29.5 bits (63), Expect = 4.5
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 68 FXQKSQS*XMADEKXVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFG 247
F Q+ + + K V K++ + +++K++L Q VL C+ A I +FG
Sbjct: 273 FRDLVQTNDIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFG 323
Query: 248 DKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL 421
+++ L ET + ++KD SK +TC + + PI D +++ D +DL
Sbjct: 324 ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDL 382
Query: 422 G 424
G
Sbjct: 383 G 383
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 29.5 bits (63), Expect = 4.5
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 68 FXQKSQS*XMADEKXVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFG 247
F Q+ + + K V K++ + +++K++L Q VL C+ A I +FG
Sbjct: 273 FRDLVQTNDIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFG 323
Query: 248 DKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL 421
+++ L ET + ++KD SK +TC + + PI D +++ D +DL
Sbjct: 324 ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDL 382
Query: 422 G 424
G
Sbjct: 383 G 383
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 29.1 bits (62), Expect = 5.9
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 236 CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 415
C+FGDK + E +K+ K FS C + +P+A + + I KKG++ K+
Sbjct: 72 CKFGDKCL--EDHKIPKPGTRLCGSCRFSKCEQMG-----MNPMAIKSEIISKKGNILKM 124
Query: 416 DL-GAHIDGFIAVVAHTVVVGE 478
+L H IAV + E
Sbjct: 125 ELVKKHNRQLIAVTKEIAIDDE 146
>AF040647-4|AAY55829.1| 152|Caenorhabditis elegans Hypothetical
protein F54D12.10 protein.
Length = 152
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 831 VFLYIVHLVSISRPT-ASPVDIRTSIAYTSYFSSVAFSCSLRCASDGFCIILFSPSIRNC 655
+FL+ + ++S+ SPV+ TS ++ + SC RC CI++ S S+ C
Sbjct: 9 LFLFPITILSVFVSVRGSPVN-STSYVSKTFLNLTWKSCITRCVIVADCILVHSNSLNRC 67
Query: 654 F 652
+
Sbjct: 68 Y 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,608,885
Number of Sequences: 27780
Number of extensions: 493791
Number of successful extensions: 1586
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 3002662306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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