Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P23
         (1144 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   5.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   5.7  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    22   7.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   10.0 

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 506 FFVVSQWIQDPHSRH 462
           F  V++W+QDP + H
Sbjct: 181 FPAVARWMQDPKTNH 195


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 14/53 (26%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
 Frame = +2

Query: 740 TCYCEKEFKKVRCSAAKWSCNQT-CQKTLLCKTHKCEDVCHEGECPPGHFSSS 895
           TC C   F  + C      C +T C     C       +C    C PG   S+
Sbjct: 8   TCTCPLGFSGINCQTNDEDCTETSCMNGGTCIDGINSYIC---TCKPGFTGSN 57


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 684 HLCLQLSPVDNLFSHISPQLCGIN 613
           HLC Q   +  +F+ + PQL  I+
Sbjct: 8   HLCAQFCLLAAIFTCVKPQLTRIS 31


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 10.0
 Identities = 7/13 (53%), Positives = 13/13 (100%)
 Frame = +3

Query: 246 FYKDTARVVAIAV 284
           +YKDTA++V++A+
Sbjct: 218 YYKDTAQLVSLAL 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,626
Number of Sequences: 336
Number of extensions: 5662
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33197234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)