Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P23
(1144 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 136 4e-33
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 35 0.024
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 34 0.032
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 34 0.042
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 33 0.074
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 32 0.13
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 31 0.30
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 30 0.52
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 30 0.69
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 29 1.6
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 2.1
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 2.1
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.7
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 27 4.9
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 4.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 4.9
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 6.4
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 6.4
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 26 8.5
SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces pom... 26 8.5
SPAC343.03 |apc11||anaphase-promoting complex subunit Apc11|Schi... 26 8.5
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 136 bits (330), Expect = 4e-33
Identities = 80/278 (28%), Positives = 115/278 (41%), Gaps = 25/278 (8%)
Frame = +2
Query: 263 KGGGDRRMLNRTKNILEEALSGNPITCLICISSVKRTDAIWTCGHCYCYFHLTCVQKWSI 442
K G D L+ T ++ E L C +C ++ + +IW+CG CY FHL+C++KW
Sbjct: 172 KKGLDLSKLDMTSRMIVE-LKNRLYECSVCTDTINPSTSIWSCGTCYHVFHLSCIRKWCK 230
Query: 443 DSVTLRSDENEGPVSIVKPQKTEWCCPKCRFTYNKSDIPRKYYCFCGKNDDPTFHPWLIP 622
+S+ R+++ W CP C+ N+++ Y C+CGK + P F L+P
Sbjct: 231 NSIEQRNED-------------AWRCPYCQ--SNQTETSLHYLCWCGKQEKPEFVKNLVP 275
Query: 623 HSCGEICEKRLSTGDSCKHKXXXXXXXXXXXXXXQTVNGTCYCEKEFKKVRCS------A 784
HSCG+ C K + G C+H TV C C KE RCS
Sbjct: 276 HSCGDPCGK--TRGQDCEHPCPLLCHPGPCPPCTATVEKFCLCGKESIHARCSNISKVNT 333
Query: 785 AKWSCNQTCQKTLLCKTHKCEDVCHEGECPPGHFSSSQSCXCGAXIAHXPCND------- 943
+ C C + L C H C+ CH G C + C CG PC+
Sbjct: 334 EPFRCENVCDELLPCGEHTCKKRCHSGLCGACFEPINAKCYCGLHSKTYPCSSLPSPSIS 393
Query: 944 ------------PHWQXQRPCQKSYPGGYHKCEKVCHP 1021
++ PC + G HKC K CHP
Sbjct: 394 KKDENGSVKEWFGYYSCNNPCTLFFDCGLHKCSKTCHP 431
Score = 65.7 bits (153), Expect = 1e-11
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Frame = +2
Query: 743 CYCEKEFK-KVRCSAAKWSCNQTCQKTLL--CKTHKCEDVCHEGECPPGHFSSSQSCXCG 913
C+C K+ K + + SC C KT C+ H C +CH G CPP + + C CG
Sbjct: 259 CWCGKQEKPEFVKNLVPHSCGDPCGKTRGQDCE-HPCPLLCHPGPCPPCTATVEKFCLCG 317
Query: 914 AXIAHXPC------NDPHWQXQRPCQKSYPGGYHKCEKVCHPGNCGXC 1039
H C N ++ + C + P G H C+K CH G CG C
Sbjct: 318 KESIHARCSNISKVNTEPFRCENVCDELLPCGEHTCKKRCHSGLCGAC 365
Score = 58.4 bits (135), Expect = 2e-09
Identities = 38/141 (26%), Positives = 53/141 (37%), Gaps = 5/141 (3%)
Frame = +2
Query: 623 HSCGEICEKRLSTGDS-CKHKXXXXXXXXXXXXXXQTVNGTCYCEKEFKKVRCSAAKWSC 799
H C C K+LS G+ C+H + + TC + + V C C
Sbjct: 583 HICFRPCNKKLSCGNHFCQHMCHRGPCPRCLEASFEELPCTCGRTRLYPPVACGTPIPDC 642
Query: 800 NQTCQKTLLCKTHKCEDVCHEGE--CPPGHFSSSQSCXCGAXIA-HXPCNDPHWQXQRPC 970
C C + + CH CPP + + C CG I + PC + + C
Sbjct: 643 PYLCVLPKSCHHPQVKHNCHPTSEPCPPCPYFVKKRCLCGKHILENQPCYRENVRCGELC 702
Query: 971 QKSYPGGYHKCEKVCHP-GNC 1030
K H CEK+CHP G C
Sbjct: 703 NKLLSCKTHFCEKLCHPDGEC 723
Score = 51.2 bits (117), Expect = 3e-07
Identities = 52/210 (24%), Positives = 69/210 (32%), Gaps = 36/210 (17%)
Frame = +2
Query: 518 CPKCRFTYNKSDIPRKYYCFCGKNDDPTFHPWLI-----PHSCGEICEKRLSTGDSCKHK 682
CP C T K +C CGK + P C +C++ L G+ H
Sbjct: 303 CPPCTATVEK-------FCLCGKESIHARCSNISKVNTEPFRCENVCDELLPCGE---HT 352
Query: 683 XXXXXXXXXXXXXXQTVNGTCYCEKEFKKVRCSAA---------------KW----SCNQ 805
+ +N CYC K CS+ +W SCN
Sbjct: 353 CKKRCHSGLCGACFEPINAKCYCGLHSKTYPCSSLPSPSISKKDENGSVKEWFGYYSCNN 412
Query: 806 TCQKTLLCKTHKCEDVCHEGECPPGH--FSSS--QSCXCGAXIA--------HXPCNDPH 949
C C HKC CH H F++ C CG C+DP
Sbjct: 413 PCTLFFDCGLHKCSKTCHPISETRAHCPFATDVLTKCPCGKEDISFLLKGHERKSCSDPI 472
Query: 950 WQXQRPCQKSYPGGYHKCEKVCHPGNCGXC 1039
+ C K G H+C+ CH G+CG C
Sbjct: 473 PTCENICGKLLSCG-HRCKYKCHLGSCGTC 501
Score = 50.8 bits (116), Expect = 3e-07
Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 11/149 (7%)
Frame = +2
Query: 626 SCGEICEKRLSTGDSCKHKXXXXXXXXXXXXXXQTVNGTCYCEKEFKKVRCSAAK----W 793
+C IC K LS G CK+K +T+ C C +V C +
Sbjct: 474 TCENICGKLLSCGHRCKYK----CHLGSCGTCSETLTIPCRCTANEVQVTCEQLQNGFIP 529
Query: 794 SCNQTCQKTLLCKTHKCEDVCHEGECPPGHFSSSQSCXC----GAXIAHXPCNDPHWQXQ 961
+C + C L C H+C C G +S +Q+ GA + + + +
Sbjct: 530 TCERLCTILLSCGRHQCNKKCCSG------YSKAQTRLARRPKGAKLRYHLLTEEFEEEH 583
Query: 962 ---RPCQKSYPGGYHKCEKVCHPGNCGXC 1039
RPC K G H C+ +CH G C C
Sbjct: 584 ICFRPCNKKLSCGNHFCQHMCHRGPCPRC 612
Score = 46.4 bits (105), Expect = 7e-06
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +2
Query: 731 VNGTCYCEKEFKKVR-CSAAKWSCNQTCQKTLLCKTHKCEDVCH-EGECPPGHFSSSQSC 904
V C C K + + C C + C K L CKTH CE +CH +GEC S + C
Sbjct: 675 VKKRCLCGKHILENQPCYRENVRCGELCNKLLSCKTHFCEKLCHPDGEC---ESSCKKEC 731
Query: 905 XCGAXIAHXPCNDPHWQXQRPCQKSYP 985
C P PC + P
Sbjct: 732 GKRRMYCEHVCQSP-CHAGHPCDERIP 757
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Frame = +2
Query: 797 CNQTCQKTLLCKTHKCEDVCHEGECPPGHFSSSQS--CXCGAXIAHXP--CNDPHWQXQR 964
C + C K L C H C+ +CH G CP +S + C CG + P C P
Sbjct: 585 CFRPCNKKLSCGNHFCQHMCHRGPCPRCLEASFEELPCTCGRTRLYPPVACGTPIPDCPY 644
Query: 965 PCQKSYPGGYHKCEKVCHPGN--CGXC 1039
C + + + CHP + C C
Sbjct: 645 LCVLPKSCHHPQVKHNCHPTSEPCPPC 671
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 305 ILEEALSGNPITCLICISSVKRTDAIWTCGHCYCYFHLTCV 427
+L ++ SG PI C C S + +I C +C Y+H C+
Sbjct: 397 LLLKSKSGTPILCFRCHKSALVSQSILACDYCNSYWHPDCL 437
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 34.3 bits (75), Expect = 0.032
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 323 SGNPITCLICISSVKRTDAIWTCGHCYCYFHLTCVQKWSIDS 448
SG CL+C+S+ + D C +FH C+ +W S
Sbjct: 519 SGTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSS 560
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 33.9 bits (74), Expect = 0.042
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 341 CLICISSVKRTDAIWTCGHCYCYFHLTCVQKW 436
C+IC D + +C C FHL C + W
Sbjct: 230 CIICFEEFAAGDRVARIEYCLCIFHLKCYRDW 261
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 33.1 bits (72), Expect = 0.074
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 341 CLICIS--SVKRTDAIWTCGHCYCYFHLTCVQKW 436
C IC S SV+RT CG C FH +C+ KW
Sbjct: 1558 CAICYSVLSVERTLPNKRCGTCRHKFHASCLYKW 1591
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 341 CLICISSVKRTDAIWTCGHCYCYFHLTCVQKW 436
C+IC +K+ I TCGH YC F C++ W
Sbjct: 1092 CIICRDIIKQ-GFITTCGHLYCSF---CLEAW 1119
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 31.1 bits (67), Expect = 0.30
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 335 ITCLICISSVKRTDAIWTCGHCYCYFHLTCVQKWSID 445
+ C+IC+ S + D + C FH C+ KW +D
Sbjct: 319 VECVICLESFTKGDKVVALP-CKHEFHRPCIAKWIVD 354
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 30.3 bits (65), Expect = 0.52
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 311 EEALSGNPITCLICISSVKRTDAIWTCGHCYCYFHLTCVQKW 436
++A + +CLIC+ + D C +FH C+ +W
Sbjct: 756 DDASLSSADSCLICLETYTNGDICRKLQACKHFFHQACIDQW 797
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 29.9 bits (64), Expect = 0.69
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 254 RYCKGGGDRRMLNRTKNILEEALS-GNPITCLICISSVKRTDAIWTCGHCYCYFHLTCVQ 430
R +++ + TK +LE + C IC +++R CGH YCY C+
Sbjct: 55 RISSNSENKKQIPDTKTLLETFQKIKKTLECPICTEALQRPFTTH-CGHTYCY---ECLL 110
Query: 431 KWSIDS 448
W +S
Sbjct: 111 NWLKES 116
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 335 ITCLICISSVKRTDAIWTCGHCYCYFHLTCVQKWSIDSVTLRSDENEGP 481
+ C +C+ V I CGH C LT V S D S+EN P
Sbjct: 744 LQCSLCMDVVAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISP 792
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 363 TELIHMRHVIG-LPLSASSRMFLVLLSIRRSPPPLQYLCKTSSSTLASYGXSFSEDESSL 187
T LI +I P+SA+S++ + L+ ++P P + S L S SF +D SL
Sbjct: 394 TNLIPSEGIISSTPISAASKVRMNLMQSNQTPTPAPFSIAAKKSHLPS-KLSFPQDGGSL 452
Query: 186 NA 181
++
Sbjct: 453 SS 454
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Frame = +2
Query: 338 TCLICISSVKRTDAIWTCGHCYCYFHLTCVQKWSIDSV-------TLRSDENEGPVSIVK 496
TC++C+ + + C FH C+QKW S ++S E + ++
Sbjct: 207 TCVVCLERMDSSITGLITIVCQHTFHCPCLQKWGNSSCPVCRYTQKVQSSEFQSKCTVCC 266
Query: 497 PQKTEWCCPKC 529
K W C C
Sbjct: 267 YDKDLWICLIC 277
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 740 TC-YCEKEFKKVRCSAAKWSCNQTCQKT 820
TC YC K+ +K+R + W+C+ C+ T
Sbjct: 28 TCFYCNKKKEKIRDGTSTWTCS-ICEAT 54
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +2
Query: 341 CLICISSVKRTDAIWTCGHCY---CYFHLTCVQKWSIDSVTLRSDENE 475
C+ C SV T +W G C+ C+ + C +K S D+ +
Sbjct: 24 CIKCWESVPSTSQVWFGGKCWHSDCFKCVNCNKKLDPSSEDFSQDDQK 71
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 550 RFVVSKSTLWAAPLGFLWF 494
RF++S T+W P G WF
Sbjct: 392 RFLISLLTVWFFPAGLFWF 410
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 285 IRRSPPPLQYLCKTSSSTLASYGXSFSEDESSLN 184
+R L+ C+T S LAS +SE ES LN
Sbjct: 1030 LREENASLKDQCRTYESQLASLVSKYSETESELN 1063
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 491 VKPQKTEWCCPKCRFTYNKS-DIPRKYYCFCGKND 592
+K + + CCP C Y KS YYC ND
Sbjct: 1228 LKFEPPDGCCPVCFCPYEKSKQSTEDYYCADDGND 1262
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 341 CLICISSVKRTDAIWTCGHCYCYFHLTCVQKW 436
C IC+ K D + C YFH C++ W
Sbjct: 396 CTICMEMFKINDDVIQLP-CKHYFHENCIKPW 426
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 534 NLHFGQHHSVFCGFTMDTGPSF 469
NL G H S F GFT P+F
Sbjct: 401 NLTIGSHSSAFQGFTYVASPNF 422
>SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +2
Query: 749 CEKEFKKVRCSAAKWSCNQTCQKTLLCKTHKCEDV 853
C++E+ + C + + + CQK CK +V
Sbjct: 168 CQREYLSINCDSPGPAIFEVCQKLKQCKMESSNNV 202
>SPAC343.03 |apc11||anaphase-promoting complex subunit
Apc11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 94
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 341 CLICISSVKRTDAIWTCGHCYCYFHLTCVQKW 436
C C S +W G C FH C+Q W
Sbjct: 35 CPQCTSPGDNCPIVW--GKCKHIFHAHCIQNW 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,290,574
Number of Sequences: 5004
Number of extensions: 89334
Number of successful extensions: 285
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 609607692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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