Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P21
         (1167 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0360 - 17966857-17966865,17966866-17966954,17967276-179673...    64   3e-10
01_02_0069 - 10813467-10813475,10813476-10813564,10813865-108139...    62   6e-10
05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382           47   2e-05
02_04_0526 - 23682012-23682533,23682647-23682843,23683050-236830...    29   7.1  
11_01_0475 - 3669734-3671452                                           29   9.3  
03_03_0055 + 14122821-14123073,14123181-14123402,14124613-141246...    29   9.3  

>12_02_0360 -
           17966857-17966865,17966866-17966954,17967276-17967399,
           17967639-17967717,17968267-17968352,17968471-17968661,
           17970496-17970560,17971192-17971282,17971705-17971801,
           17971883-17972128,17972248-17972505
          Length = 444

 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +2

Query: 308 VVSGGVACNDFIFKSMQFVAGKSGYSCYRPPPKVCTDNGIMIAWNGVE 451
           VVSGGVA N ++   +  +A K+G     PPPK+CTDNG+MIAW G+E
Sbjct: 375 VVSGGVASNQYVRTHLNQIAEKNGLQLVCPPPKLCTDNGVMIAWTGIE 422


>01_02_0069 -
           10813467-10813475,10813476-10813564,10813865-10813988,
           10814227-10814305,10815298-10815388,10815808-10815904,
           10816197-10816241,10816369-10816464
          Length = 209

 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = +2

Query: 308 VVSGGVACNDFIFKSMQFVAGKSGYSCYRPPPKVCTDNGIMIAWNGVE 451
           VVSGGVA N ++   +  +A K+G     PPP++CTDNG+MIAW G+E
Sbjct: 140 VVSGGVASNQYVRTHLNQIAEKNGLQLVCPPPRLCTDNGVMIAWTGIE 187


>05_02_0025 - 5710833-5711234,5711373-5711528,5714615-5715382
          Length = 441

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 32/116 (27%), Positives = 55/116 (47%)
 Frame = +2

Query: 101 FSGLKASLVSKLIKKXKAHGITGXCLIPXXNDLCASFQIALAEHLGHXLXXAIIFCEEKN 280
           FSG+ + + +  I+K K +  T         DLC S Q  L   L      A+  C+   
Sbjct: 278 FSGILSFIEATAIEKLKNNECTPA-------DLCYSLQETLFAMLVEITERAMAHCD--- 327

Query: 281 LINPNNKNIVVSGGVACNDFIFKSMQFVAGKSGYSCYRPPPKVCTDNGIMIAWNGV 448
                +K++++ GGV CN+ + + M+ +  + G   +    + C DNG MIA+ G+
Sbjct: 328 -----SKDVLIVGGVGCNERLQEMMRIMCSERGGRLFATDDRYCIDNGAMIAYTGL 378


>02_04_0526 -
           23682012-23682533,23682647-23682843,23683050-23683098,
           23683272-23683429,23683558-23683852
          Length = 406

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 386 CYRPPPKVCTDNGIMIAWNGVEKLKKSYQIQYDL 487
           C  P    C D G  ++W+GV   +++Y +  +L
Sbjct: 353 CGAPGTAACADPGRYVSWDGVHLTQRAYGVMAEL 386


>11_01_0475 - 3669734-3671452
          Length = 572

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 299 KNIVVSGGVACNDFIFKSMQFVAGKSGYSCYRPPPKVCTDNG 424
           K+  VSG VA  D IF +++ +   S +   R    +C DNG
Sbjct: 490 KHFRVSGSVASPDEIFAALEEIPELSRHDLLRAYSMLCHDNG 531


>03_03_0055 +
           14122821-14123073,14123181-14123402,14124613-14124650,
           14125117-14125231,14125357-14125508,14125626-14125899,
           14126021-14126244
          Length = 425

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 380 YSCYRPPPKVCTDNGIMIAWNGVEKLKKSYQ 472
           +SC  P   +CT+    I+W+GV   + +Y+
Sbjct: 375 FSCGGPSTNLCTNPSTYISWDGVHLTEAAYK 405


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,153,669
Number of Sequences: 37544
Number of extensions: 348765
Number of successful extensions: 551
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)