Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_P20
         (1190 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0715 - 31168831-31169071,31169947-31170064,31170305-31170353     36   0.063
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225           30   3.1  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   4.1  

>02_05_0715 - 31168831-31169071,31169947-31170064,31170305-31170353
          Length = 135

 Score = 35.9 bits (79), Expect = 0.063
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +1

Query: 187 HTEVQWKVTKNSITDMKHISTEKTLMVGKSAKE*MTSVVW-ISFPTQRLSKLP--FMHA 354
           H +++WK   ++    KH  TEK L  G S  E  TS  W +    Q + KL   +MHA
Sbjct: 71  HYQLRWKGKLSTSGSCKHSETEKLLYRGLSKSERYTSTFWMVCMDNQSIKKLDNNYMHA 129


>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
          Length = 467

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = +1

Query: 970  SXXXGGXGGGGFXPXXKXTXPXPPGXXXXXXFXGGPXXXXPXPXXPXXPG 1119
            S   GG GGGGF P      P P            P    P P  P   G
Sbjct: 18   STGGGGGGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPPPPPAAAG 67


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 15/52 (28%), Positives = 15/52 (28%)
 Frame = -1

Query: 1136 PPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXPPPPXPP 981
            PP    PG     G G     P         P          G  PPPP PP
Sbjct: 304  PPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPP 355


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,085,673
Number of Sequences: 37544
Number of extensions: 456776
Number of successful extensions: 2312
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)