Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_P20
(1190 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407649-1|CAG28577.1| 150|Homo sapiens COX5A protein. 149 3e-35
BC024240-1|AAH24240.1| 150|Homo sapiens cytochrome c oxidase su... 149 3e-35
M22760-1|AAA99220.1| 150|Homo sapiens cytochrome c oxidase subu... 148 3e-35
AF067635-1|AAC73060.1| 37|Homo sapiens cytochrome c oxidase su... 57 1e-07
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 33 2.0
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 33 2.0
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 33 2.0
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 33 2.0
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 33 2.0
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 33 2.0
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 33 2.0
>CR407649-1|CAG28577.1| 150|Homo sapiens COX5A protein.
Length = 150
Score = 149 bits (360), Expect = 3e-35
Identities = 68/107 (63%), Positives = 81/107 (75%)
Frame = +3
Query: 195 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVNDYA 374
G E+DEEFD R+ YFN+ DID WE+RKG+N L D+VP+PKII AAL ACRR+ND+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
Query: 375 LAVRFIEACKDKCGNKVNEIYPYIIQEIKPTLTELGIDTPEELGYDK 515
VR +E KDK G EIYPY+IQE++PTL ELGI TPEELG DK
Sbjct: 104 STVRILEVVKDKAGPH-KEIYPYVIQELRPTLNELGISTPEELGLDK 149
>BC024240-1|AAH24240.1| 150|Homo sapiens cytochrome c oxidase
subunit Va protein.
Length = 150
Score = 149 bits (360), Expect = 3e-35
Identities = 68/107 (63%), Positives = 81/107 (75%)
Frame = +3
Query: 195 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVNDYA 374
G E+DEEFD R+ YFN+ DID WE+RKG+N L D+VP+PKII AAL ACRR+ND+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
Query: 375 LAVRFIEACKDKCGNKVNEIYPYIIQEIKPTLTELGIDTPEELGYDK 515
VR +E KDK G EIYPY+IQE++PTL ELGI TPEELG DK
Sbjct: 104 STVRILEVVKDKAGPH-KEIYPYVIQELRPTLNELGISTPEELGLDK 149
>M22760-1|AAA99220.1| 150|Homo sapiens cytochrome c oxidase subunit
Va protein.
Length = 150
Score = 148 bits (359), Expect = 3e-35
Identities = 68/107 (63%), Positives = 81/107 (75%)
Frame = +3
Query: 195 GPVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVNDYA 374
G E+DEEFD R+ YFN+ DID WE+RKG+N L D+VP+PKII AAL ACRR+ND+A
Sbjct: 44 GSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVPEPKIIDAALRACRRLNDFA 103
Query: 375 LAVRFIEACKDKCGNKVNEIYPYIIQEIKPTLTELGIDTPEELGYDK 515
VR +E KDK G EIYPY+IQE++PTL ELGI TPEELG DK
Sbjct: 104 SLVRILEVVKDKAGPH-KEIYPYVIQELRPTLNELGISTPEELGLDK 149
>AF067635-1|AAC73060.1| 37|Homo sapiens cytochrome c oxidase
subunit Va protein.
Length = 37
Score = 56.8 bits (131), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +3
Query: 405 DKCGNKVNEIYPYIIQEIKPTLTELGIDTPEELGYDK 515
DK G EIYPY+IQE++PTL ELGI TPEELG DK
Sbjct: 1 DKAGPH-KEIYPYVIQELRPTLNELGISTPEELGLDK 36
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 678 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 737
Query: 998 PPPXP 984
PPP P
Sbjct: 738 PPPPP 742
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 72 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 131
Query: 998 PPPXP 984
PPP P
Sbjct: 132 PPPPP 136
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 678 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 737
Query: 998 PPPXP 984
PPP P
Sbjct: 738 PPPPP 742
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 688 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 747
Query: 998 PPPXP 984
PPP P
Sbjct: 748 PPPPP 752
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 72 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 131
Query: 998 PPPXP 984
PPP P
Sbjct: 132 PPPPP 136
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 667 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 726
Query: 998 PPPXP 984
PPP P
Sbjct: 727 PPPPP 731
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 33.1 bits (72), Expect = 2.0
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 1178 PXXPPXXGXXKXXXPPXXXXPGXXGXXGXGXXXXGPPXKXKXXXXPGGXGXVXXXXGXXP 999
P PP PP PG G G P PGG G G
Sbjct: 715 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGM 774
Query: 998 PPPXP 984
PPP P
Sbjct: 775 PPPPP 779
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,937,815
Number of Sequences: 237096
Number of extensions: 2620712
Number of successful extensions: 11646
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11321
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16734053920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -